Os02g0459600

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Revision as of 02:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0459600| Description = Legume lectin, beta domain containing protein| Version = NM_001053320.2 GI:297599171 GeneID:4329292| Length = 3953 b...")
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Gene Name

Os02g0459600

Description

Legume lectin, beta domain containing protein

Version

NM_001053320.2 GI:297599171 GeneID:4329292

Length

3953 bp

Definition

Oryza sativa Japonica Group Os02g0459600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16142125..16146077

Sequence Coding Region

16142220..16144328

Expression

GEO Profiles:Os02g0459600

Genome Context

<gbrowseImage1> name=NC_008395:16142125..16146077 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16142125..16146077 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccacctagcagcgccatcgccatgcctccacgctgtaggcgcctccccctcctcttcatcctcctccttgccgtccgcccactctccgccgccgccgcgtcgagcatcgctgcggcccccgcctcctcctaccgccgcatctcgtgggcgagcaacctcacgctcctcggctcagcctcgctcctcccgggcgcggccggcgtcgcgctcaccaccccttcccgcgacggcgtcggcgccggccgcgctctcttctcggagcccgtgcgcctcctcctgccccaggacgcggccgcctccgcctccgcctcgcgtgccgctaccccggcctccttctccacccgcttcaccttccgcatcacgccctcccccacctacggcgacggcctcgcgttcctcctcacctcctcccgcactttcctcggcgcttccaacgggttccttggcctgttcccctcctcatccgcctccgacgagggggagctccgcgacgtctccaccgtcgccgtcgagatcgacacccacctcgacgtggcgctgcatgacccggacggcaaccacgtcgcgctcgacgcggggtccatcttctccgtcgcgtccgcgcaaccaggcgtcgacctcaaggccggcgtgcccatcaccgcctgggttgagtaccgcgcgccgcgccgccgcctcaacgtatggctgtcctactcgccgtcccgccgccccgagaagcccgccctctcggccgatgtcgacctctccggcctcctgcgcacctacatgtacgcggggttttcggcctccaatggcaacggcgctgcgcttcacgtcgtcgagcgctggaccttccgcaccttcggcttccccaactcttcatacgccccgccgccgaccaagtacataggcccaatgccacccaataaccagcctctccctccccctccctctccctctccctctccccctcccccttcccctccccctccccctcaccctaaccaccgccgccgccatctgttctacaaggtgcttggcggagtcctcggtggtatggtattgctgggccttgtcgtcgttggttctgctgtcttgcttggccggtcagtgcgccgcaaaaatcaagaacatgcagtggcaagcgaggacatgggggaagcgacactctctatggaggtggcacgggcagcaacaaagggctttgacagtggcaatgtgatcggcgttggtggctctggtgctactgtgtatgagggggtgctcccctctgggtcgagggttgctgtcaaacggtttcaggctattggatcgtgcaccaaggcatttgacagtgagctcaaggccatgcttaattgccctcatcacccaaatctcgtgccgcttgctgggtggtgcagaagtaaggatgagcttgtgcttgtttatgagttcatgcccaacgggaatctagactctgcattgcacacactgggtggggcaacacttccctgggaggcacggttcagggctgtatatggtgttgcatcagcgctagcatatctgcatgatgagtgtgagaaccggattatacatcgtgatgtcaagtcatcaaatgttatgcttgatgcagagttcaatgctcggctaggtgattttggccttgctcgcactgtgagccatggtgggttgccacttacaacacagccagcaggcacactggggtaccttgcaccagaatatgttcatacaggggtggctacagagcggtctgatgtgtacagctttggggtgcttgctctggaagtggccactggacgaaggcctgctgagaggggaatctctgttgttaattgggtgtggactctatggggtcgtcgaaggctggttgatgcagcagaccggcggctccagggacgatttgttgcagatgagatgcgacgggtgctgcttgtgggtctgtgttgtgtacatccagactgccggaagcggcctggtatgcgaagggtagtcagtatgcttgatggtactgcaccgttgatattggtaccagataagatgccaccagttcttctacagccagtaccaaatgcttcatcaatgaactctgcagatactgccaatactgcattcttcagttgtcgctga</cdnaseq>

Protein Sequence

<aaseq>PPSSAIAMPPRCRRLPLLFILLLAVRPLSAAAASSIAAAPASSY RRISWASNLTLLGSASLLPGAAGVALTTPSRDGVGAGRALFSEPVRLLLPQDAAASAS ASRAATPASFSTRFTFRITPSPTYGDGLAFLLTSSRTFLGASNGFLGLFPSSSASDEG ELRDVSTVAVEIDTHLDVALHDPDGNHVALDAGSIFSVASAQPGVDLKAGVPITAWVE YRAPRRRLNVWLSYSPSRRPEKPALSADVDLSGLLRTYMYAGFSASNGNGAALHVVER WTFRTFGFPNSSYAPPPTKYIGPMPPNNQPLPPPPSPSPSPPPPSPPPPPHPNHRRRH LFYKVLGGVLGGMVLLGLVVVGSAVLLGRSVRRKNQEHAVASEDMGEATLSMEVARAA TKGFDSGNVIGVGGSGATVYEGVLPSGSRVAVKRFQAIGSCTKAFDSELKAMLNCPHH PNLVPLAGWCRSKDELVLVYEFMPNGNLDSALHTLGGATLPWEARFRAVYGVASALAY LHDECENRIIHRDVKSSNVMLDAEFNARLGDFGLARTVSHGGLPLTTQPAGTLGYLAP EYVHTGVATERSDVYSFGVLALEVATGRRPAERGISVVNWVWTLWGRRRLVDAADRRL QGRFVADEMRRVLLVGLCCVHPDCRKRPGMRRVVSMLDGTAPLILVPDKMPPVLLQPV PNASSMNSADTANTAFFSCR</aaseq>

Gene Sequence

<dnaseqindica>96..2204#aaatcccccatccccaccgccattctcgacggtttctcgagctccacctcctcgcgtgcccacgccatccatggcttcttccgcacacaatgtgaccacctagcagcgccatcgccatgcctccacgctgtaggcgcctccccctcctcttcatcctcctccttgccgtccgcccactctccgccgccgccgcgtcgagcatcgctgcggcccccgcctcctcctaccgccgcatctcgtgggcgagcaacctcacgctcctcggctcagcctcgctcctcccgggcgcggccggcgtcgcgctcaccaccccttcccgcgacggcgtcggcgccggccgcgctctcttctcggagcccgtgcgcctcctcctgccccaggacgcggccgcctccgcctccgcctcgcgtgccgctaccccggcctccttctccacccgcttcaccttccgcatcacgccctcccccacctacggcgacggcctcgcgttcctcctcacctcctcccgcactttcctcggcgcttccaacgggttccttggcctgttcccctcctcatccgcctccgacgagggggagctccgcgacgtctccaccgtcgccgtcgagatcgacacccacctcgacgtggcgctgcatgacccggacggcaaccacgtcgcgctcgacgcggggtccatcttctccgtcgcgtccgcgcaaccaggcgtcgacctcaaggccggcgtgcccatcaccgcctgggttgagtaccgcgcgccgcgccgccgcctcaacgtatggctgtcctactcgccgtcccgccgccccgagaagcccgccctctcggccgatgtcgacctctccggcctcctgcgcacctacatgtacgcggggttttcggcctccaatggcaacggcgctgcgcttcacgtcgtcgagcgctggaccttccgcaccttcggcttccccaactcttcatacgccccgccgccgaccaagtacataggcccaatgccacccaataaccagcctctccctccccctccctctccctctccctctccccctcccccttcccctccccctccccctcaccctaaccaccgccgccgccatctgttctacaaggtgcttggcggagtcctcggtggtatggtattgctgggccttgtcgtcgttggttctgctgtcttgcttggccggtcagtgcgccgcaaaaatcaagaacatgcagtggcaagcgaggacatgggggaagcgacactctctatggaggtggcacgggcagcaacaaagggctttgacagtggcaatgtgatcggcgttggtggctctggtgctactgtgtatgagggggtgctcccctctgggtcgagggttgctgtcaaacggtttcaggctattggatcgtgcaccaaggcatttgacagtgagctcaaggccatgcttaattgccctcatcacccaaatctcgtgccgcttgctgggtggtgcagaagtaaggatgagcttgtgcttgtttatgagttcatgcccaacgggaatctagactctgcattgcacacactgggtggggcaacacttccctgggaggcacggttcagggctgtatatggtgttgcatcagcgctagcatatctgcatgatgagtgtgagaaccggattatacatcgtgatgtcaagtcatcaaatgttatgcttgatgcagagttcaatgctcggctaggtgattttggccttgctcgcactgtgagccatggtgggttgccacttacaacacagccagcaggcacactggggtaccttgcaccagaatatgttcatacaggggtggctacagagcggtctgatgtgtacagctttggggtgcttgctctggaagtggccactggacgaaggcctgctgagaggggaatctctgttgttaattgggtgtggactctatggggtcgtcgaaggctggttgatgcagcagaccggcggctccagggacgatttgttgcagatgagatgcgacgggtgctgcttgtgggtctgtgttgtgtacatccagactgccggaagcggcctggtatgcgaagggtagtcagtatgcttgatggtactgcaccgttgatattggtaccagataagatgccaccagttcttctacagccagtaccaaatgcttcatcaatgaactctgcagatactgccaatactgcattcttcagttgtcgctgagcatacaagttataggttagcgaatacaaatttcttattcatatcatctatagtcatgttaatgttttgaaccatcttctgttctttcctgctaaagacaaaaaaggtcaaatgtaaataggagactgttctgattgttacaaaaatgttgcttgatcttaactgttaagcgtagcgaatgactgctttttgagggaacctgtagagagttttattttctgactcaaaaccacagttaaacatgtcatactttttactgctcagatctggtgtcagtcgtttgaagatagttttgatggtatctgtaatgcatgtcttatggtctgtgcagtttgtcctgacaaaatttgacattaccatcatgttttataatagaaagttcaatcctaattctggcatttaactgcctggaaattgctgtaatgtgtatcatgaaaaatgtagcactgcctccaatgttgatgcaaatgcaacaaatgtctgctgatgtagagcaaataaaatttgtcattgcttgtgctttgtaagtttgctgaaacattaataaagcatgacaagaatgaagatattgtatgctgctgaatagttacttcgaaagttttagtagcaaccaaacctttactaattgttgtgactgttgaattgattgttaataacgtttatgtgaagcaggttagatgtgaactctggattaacagacaatttgattgttgtacaacttgtagaagttcagaattagacaagcacttgaacatattttcttttgcttcactttatgagtagcaaattgaagctactctgttgggcgaattgtcagaaagagcttactgttagacagcatattgggagctatgttaagaaggaaaaactgttagctgcatctagttgtatcgagaatatttcatccagtaattatttgaatttgattaagtttcatttgtcccatattctagctatatctcccatgaccattcaaatgctttgaaagtacacatagttgatcaatgaaataattctgttgtagtgttgttgccatggttttttttatcttcattatatgcggatcaattgactttaccttttttttttcaagatgtatacaatgcttaaggtactaaggtatatccacttggaacacatcaattgctagtcactttaatgtgactaataccttcctgtcaatatttctaaaaagtaaaggtacttctagtacttacaatttcaggcaccacaaaatgtcccctagttttcatcatatcattgtgagtatggacaaggctgtacaattatgagtagtttccctgacatataataggttggtctaacacatctgtaatctgtgtagaatgctctatatgtactgaaatctttcaaattattcagggttcatttgcctcatgtttgcttctttggataatttgatcgcttctgcagcacaagcatatgatcaacttgggaaattttgttctacagcctatatggcactgataagatgacctggatatgtagaatggatcaaccagcgttgccctttgtgttgttttaaagctaaggcattgacctttgtaccgaacaagaattttttgatgcgggctctgctcactctgcttcacctgctgggtggtatgaaaatcctgatagttttctttaccaagaatcgtaactagattcgggaatttctcttatgctatctttatttgtcccaatcattgtacatactttgttctgcaagtaatctattctggaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0459600, RefSeq:Os02g0459600