Os02g0516800

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Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0516800| Description = Homeodomain-like containing protein| Version = NM_001053494.1 GI:115446358 GeneID:4329479| Length = 3810 bp| Defini...")
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Gene Name

Os02g0516800

Description

Homeodomain-like containing protein

Version

NM_001053494.1 GI:115446358 GeneID:4329479

Length

3810 bp

Definition

Oryza sativa Japonica Group Os02g0516800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19436889..19440698

Sequence Coding Region

19436889..19437223,19439909..19440698

Expression

GEO Profiles:Os02g0516800

Genome Context

<gbrowseImage1> name=NC_008395:19436889..19440698 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19436889..19440698 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccgccggcgaccccgccgcggcggccgcggccgcggcagccgccacgccgtccggccgcgcgccgaggctgccgcggtggacgcggcaggagatactggtgctgatcgaggggaagcgcatggtggagggccgagggggcgggcgcggcgggaggggccgcgccgcggcggcggctgctgctgctgcggcggcggcggcggggggctctgggggggaggcggcggtggcggcgctggagcccaagtgggcggcggtggcggagtactgccggcggcacggcgtggagaggggcgccgtgcagtgcaggaagcggtggagcaacctcgccggggactacaagaagatcaaggagtgggagcgcgcggcggcggcggcggcgccgccgcgggagccgtcgttctgggccatgcggaacgacgcgcggcgggagcgccggctcccggggttcttcgaccgggaggtgtacgacatactcgacggccgggggcgcggcaccctcgtctccccctccggaggaggtaatgccgcggcgggggaagaggagcccgcgcgcgcggcggcggaggtggaggtggaggtggaggaggaggaggagacggggaagacgcgagcccgagccgaggagacggtgttcgacagtggccgccccgccgcggaagagtcgctgttctccgacgacgaggaggaggaggacgacgacgaggcgccgccggcgaccgccgccgccgtcgctgcgacggcacaggcgccgcctcgagcggtgatcgccttgccgatatccggcacgtcgaaagacaagcagccggagcagcaggccgcatcgagaggcacgccaccgccgccgccgccgacgacgcagcagcagcagggtgggcagaagcggcggcgagccgacgacgacgaggaggaggaggacgacggccgccgcggcggcgagctgcagagcaagctggtggagatcctggatcggagcagccggatggtggcggcgcagctggaggcgcagaacgccaacagccggctcgaccgggagcagcggcgagaccaggcggccagcctcgccgtcgtgctcggccggctcgccgacgcgctcggccggatcgccgacaagctatag</cdnaseq>

Protein Sequence

<aaseq>MSTAGDPAAAAAAAAAATPSGRAPRLPRWTRQEILVLIEGKRMV EGRGGGRGGRGRAAAAAAAAAAAAAGGSGGEAAVAALEPKWAAVAEYCRRHGVERGAV QCRKRWSNLAGDYKKIKEWERAAAAAAPPREPSFWAMRNDARRERRLPGFFDREVYDI LDGRGRGTLVSPSGGGNAAAGEEEPARAAAEVEVEVEEEEETGKTRARAEETVFDSGR PAAEESLFSDDEEEEDDDEAPPATAAAVAATAQAPPRAVIALPISGTSKDKQPEQQAA SRGTPPPPPPTTQQQQGGQKRRRADDDEEEEDDGRRGGELQSKLVEILDRSSRMVAAQ LEAQNANSRLDREQRRDQAASLAVVLGRLADALGRIADKL</aaseq>

Gene Sequence

<dnaseqindica>3476..3810#1..790#atgtccaccgccggcgaccccgccgcggcggccgcggccgcggcagccgccacgccgtccggccgcgcgccgaggctgccgcggtggacgcggcaggagatactggtgctgatcgaggggaagcgcatggtggagggccgagggggcgggcgcggcgggaggggccgcgccgcggcggcggctgctgctgctgcggcggcggcggcggggggctctgggggggaggcggcggtggcggcgctggagcccaagtgggcggcggtggcggagtactgccggcggcacggcgtggagaggggcgccgtgcagtgcaggaagcggtggagcaacctcgccggggactacaagaagatcaaggagtgggagcgcgcggcggcggcggcggcgccgccgcgggagccgtcgttctgggccatgcggaacgacgcgcggcgggagcgccggctcccggggttcttcgaccgggaggtgtacgacatactcgacggccgggggcgcggcaccctcgtctccccctccggaggaggtaatgccgcggcgggggaagaggagcccgcgcgcgcggcggcggaggtggaggtggaggtggaggaggaggaggagacggggaagacgcgagcccgagccgaggagacggtgttcgacagtggccgccccgccgcggaagagtcgctgttctccgacgacgaggaggaggaggacgacgacgaggcgccgccggcgaccgccgccgccgtcgctgcgacggcacaggcgccgcctcgagcggtgatcgccttgccgatatccggtgagctgccctttgactttctttcctttttttgctgctaaaattgcaatatcttttggcgataaaagcagagttctcgcccctcttcctcctcctcctcctcgatgaattcgaactcttagcacttttcggcggtaaactcgggaaataatttgctacaaaacctagcttttgagcgacgaatctgtgtttacgctgttcataggacgcgaaaaaggtgggaatctttccggttcccatcgcacagattgttcagcgtgtcctctttgcgttgacgacttgaattgccgcaaaattttgagcttccagtgctcaaatttagtctgtgcgtcctcatattgaaattttggggtgagggtttgaatgatttgcctggtgtctttcttgtttctggttcgtgttcgttctggtagagatggttcgtttggtaggttcatcgattcatgttgctttttttttcctcgtgatttctttttccagagaagaacagagaaaggaggtaatcggatttcacttcattttacatcatcttttctcgatcgagctctctccttttgctgccttgtttccagatttgttgctagtgttgcacaagggaaaaagaaataagttactgttccattgacttgatcagcatagtccgtagacaaaaaggcgaaaaaattgcgatttagattagtgatgcatgttatgattatcagtttgggtggcaggaggtagctgcagcctgcaaatgcacttgatgcatctctttcaccatgtcacttagcaatgaaatttcaggattatcagcaaatggttttactagtaaactgtcagatgcttcctagaatgggaaaccttttttatcccgtaagagaggtttgccccgtcattctttcaaatcacatgtaatttgttacggaaaaatttgaaaatgtttaatggcatttgcacaatatatatgtattatcctaaaatttaaatccaaattcaacccacacagtaagaccaaaagaaaaaggaaatccaaattgtcaattgtacttgcactgttcaccttcctagattgtccatcatgttagccactagcccaactagtgctaaacagtgggctcctcggggcaaaaactacatctctgtccaaccaattgttgcaacgcaatgcaaactctgctttcgcatgatgaactgattgagctatatatggccgtgtgggggccattgaaaccaaaactagagtttactcacccctgtggtgtgatggaagtggcaacccaccaaaaactgaattgattcggtggttaccatgtccctcgaagctttctctgtattggcagtccttgatatcgaacacggctttcggttccttcctagcgcacggcatttaggatttcaaatttgcaatgttcgaataaaatgggtcagtttgatatgattctgattcaaaactaataccttagtttagtgcttcaaatcgagtacacctgaagattagtagcattgccaaacggttgtacgtagtagtagcagcattgcctctagatatgaattttcatctcttaaggggatatcctctacttacttgcatgtcacctcaacatagattgctatgaaatacatcacttcataagcatgcaaaagccaaattcaacttctataagttgcaaaaaaaatgaattaaactgaaaatagttatcgtatattcgcagctttttttgttataacttgcctatactattatacaaattgaagatgtttttgtcggtactttggtacgttatccgagtgtgagtcggtttttaagtttgttctttttggaaatacaaagccgtatttaagtcggtttttaagttcgtttgtttttgtaaatacagaaggaattgtataagagatttctttaaaaactcgcatgctaacttgagacgatcagactcctaattgcagctcatgattttctaaaataatatatatatccaaacgggttcttacagtatatttcaccttaactaaaagatataacaataataaaattaaaatagtatttacccgttgcaatgcacgtctactaaaaattaaattttaacttacatgtatgtggagtgatatatttcatattaatcttgtcaatttattttaatttttttaatgactatttagatgacacacataaaatgagagagatgagagataaatacgttttcccggccaatctttagagctgggaagaggcgtgaattcctgtgtcctttgccttgttttgacaaatgaaaggagatggtttagatcggtaacctatttctttgcagatacgaaatattcatgtgcattgtactgtgcagatgatgatgcctgcagatttaattaattatcgtttcatcatacgcgtcgtggtacttcctcagtgtcatgtcaatatgtcatcaatcgtagtagcagcaaacgaatccgtttgctttttttttttggtttatttccacgagcaaatctgcagttttcattagcatctcgatgtgtagtacagttgaaaaaaaaaagcttccattttttttttttgccggcgaagagttgaaaagacttggtaattagtagttgcatgatcagacgacacaatcttctccgaaagtaacgtgacgaacagctgatctgagctggaagtatcgtaacactactaaccaatcagcgactattcttcttttttcacaggcacgtcgaaagacaagcagccggagcagcaggccgcatcgagaggcacgccaccgccgccgccgccgacgacgcagcagcagcagggtgggcagaagcggcggcgagccgacgacgacgaggaggaggaggacgacggccgccgcggcggcgagctgcagagcaagctggtggagatcctggatcggagcagccggatggtggcggcgcagctggaggcgcagaacgccaacagccggctcgaccgggagcagcggcgagaccaggcggccagcctcgccgtcgtgctcggccggctcgccgacgcgctcggccggatcgccgacaagctatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0516800, RefSeq:Os02g0516800