Os02g0517300

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Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0517300| Description = Conserved hypothetical protein| Version = NM_001053495.1 GI:115446360 GeneID:4329480| Length = 6641 bp| Definition ...")
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Gene Name

Os02g0517300

Description

Conserved hypothetical protein

Version

NM_001053495.1 GI:115446360 GeneID:4329480

Length

6641 bp

Definition

Oryza sativa Japonica Group Os02g0517300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19484571..19491211

Sequence Coding Region

19484729..19484798,19485150..19485316,19486647..19486703,19487456..19487525,19488103..19490186

Expression

GEO Profiles:Os02g0517300

Genome Context

<gbrowseImage1> name=NC_008395:19484571..19491211 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19484571..19491211 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggcgtcgagtcggatggcggcggcggcgcgcctttctcctcctcctcctccgcggccgctccagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggaggggctcgagctcagttgcttggaggatggcggcggcggcggtggtgatgccaatggcggtggattcagtggaggagcagaagaagggctgtaccggctctcctctgttggagaagagattgataatctgagtaacttgtccgatattgatgatcttgcgagcacttttgcaaagttgaaccgaaccattagtggaacacggaatcctggtgttattggtgacagacgatccatctcaagaggaagttctctaactgttgattgggctgaagatgtagaatttcctaactgggtagatcaagacattttagaggatgaggaatttcaggaaagtaaaagatggtggtcacagtcacacactctggtgcagcaaggggatgccaaaccattgagccgaacatcttcctatcctcagcaaccactgcagcaccgggcaagtgaacctatcattccaccaaaatctccttcatttacgtcctttccaccgccaggtggtagatcaccttatacttctcaaggccttacacgccatgggagcattccatcacttggtgctggcctgcaaatgggttctccaagcatgtcccttccaagttctccatatcatatagctggactatctcatggactaccgtatggagggagcatgtccttcggcacttcaaatctgcctgtaaacaatccaatgcaaaatgattggccaagccaagccaatctttatgctggggagcaatttaatctactgccgaacatgttacagaaacaaatatcacttccaaatagcccgatgtcatcactgttattttctcaacagcagcagagattggcacaagttcaagtccaaccatcccatcagaattacctaaatttaccacctcacatattttaccaacatcactccccagaattaacaggaagatttgattctgttagcagtgttccttcatcaagagacaagagatcaaggtcaggaagaggaaaacacaacatacgtttttctcaaccattgcctgatactggtaatcaaaatggtgatagtggaggaataaaattcagatctaagtacatgtcatctgaagagatcgaatctatcttaagaatgcaacattcagcaagtcacagcagtgatccttatgtggttgattattaccaccaagcttgcatcgcgaaaaggggtgccaattctaggccaaaggccaattttgccccaacgtcaatgaaagacttgccttccaagtcccgatccagtggtgaccatcatgcatatcttcaggttgatgctgtaggaagagtttccttctcttccatacgtaggcctcgttctcttcttgaagttgaccttccttcatcaagtgatggttctcatgatcagaagtcttctctgagaccattggagaaagaaccaatgctggccgctagagtcactgttgaagatgccctctgccttcttcttgaggtggatgatattgaccgtctgttgcagtctagtcaggcacaggataacagtttccaactgaggcgaagacggcaggtcctccttgaaggtttagctgcatcacttcagcttgttgaccctctcgggccgagcacatcaagccattcatctggattggctgctaaggatgatcttgtttttcttcgcattgtttctcttcctaaaggacgcaagtttttgtcacgttaccttcgacttcttacccctggaagtgagttgacccgtatagtatgcatggctatttttcgacatctgaggtacttgttcgggggtttaccatcagattctagtgcagcagaaacaacagttactcttgcaaagactctttcatcttgtgtgcgccatatggaactaggtgctcttagtgcttgccttgctgctgtggtctgttcacctgagcagccacctctgcgtcctctagctagctctgctggtgatggggcttctcttattattaaatcagtactggatcgagcaactgagttactgactgaccagcatgccgcagccagctatacagtgtcaaaccggactctctggcaggcatcatttgatgctttctttggacttctgacaaaatactgtctcagcaagtatgaaagtattaggcagatgtttaccatgcagtcaccaggctctgtaattggatctgaggtctccaaagcaaccagcagggagatgccggttgagttgctacgtgcaagcctccctcatacaaatgatcagcaacgccagctgctgcttgattttgctcagcgaaccatgccagtgactggttttaatgccagcggtgcaaatggtgggcacatcacctccgagtctgttcctggttga</cdnaseq>

Protein Sequence

<aaseq>MRGVESDGGGGAPFSSSSSAAAPDNFDAAQYSFFGKEPLEGLEL SCLEDGGGGGGDANGGGFSGGAEEGLYRLSSVGEEIDNLSNLSDIDDLASTFAKLNRT ISGTRNPGVIGDRRSISRGSSLTVDWAEDVEFPNWVDQDILEDEEFQESKRWWSQSHT LVQQGDAKPLSRTSSYPQQPLQHRASEPIIPPKSPSFTSFPPPGGRSPYTSQGLTRHG SIPSLGAGLQMGSPSMSLPSSPYHIAGLSHGLPYGGSMSFGTSNLPVNNPMQNDWPSQ ANLYAGEQFNLLPNMLQKQISLPNSPMSSLLFSQQQQRLAQVQVQPSHQNYLNLPPHI FYQHHSPELTGRFDSVSSVPSSRDKRSRSGRGKHNIRFSQPLPDTGNQNGDSGGIKFR SKYMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKRGANSRPKANFAPTSMKDLP SKSRSSGDHHAYLQVDAVGRVSFSSIRRPRSLLEVDLPSSSDGSHDQKSSLRPLEKEP MLAARVTVEDALCLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLAASLQLVDPL GPSTSSHSSGLAAKDDLVFLRIVSLPKGRKFLSRYLRLLTPGSELTRIVCMAIFRHLR YLFGGLPSDSSAAETTVTLAKTLSSCVRHMELGALSACLAAVVCSPEQPPLRPLASSA GDGASLIIKSVLDRATELLTDQHAAASYTVSNRTLWQASFDAFFGLLTKYCLSKYESI RQMFTMQSPGSVIGSEVSKATSREMPVELLRASLPHTNDQQRQLLLDFAQRTMPVTGF NASGANGGHITSESVPG</aaseq>

Gene Sequence

<dnaseqindica>159..228#580..746#2077..2133#2886..2955#3533..5616#tctctttcctcctcctcctcgcgcagccgcgctcagatccaaagccgcgcgcgggggagggagggaggaatcgcggtgccaagaaacgaagccctagccccccctagatgcgcgccgccgcttgctgctgctgctgctgctagggttcttgtacggagatgcggggcgtcgagtcggatggcggcggcggcgcgcctttctcctcctcctcctccgcggccgctccaggtgaggcttttttttttcttgaggcttcttgatctggtagctgctgctgctgcgagtagtttggggtgctgtgttggcgttgaatttggtttgcgggaaaagtcggcgccttgatctgttttgctgtctcttcccgatgcgaatcgttgggttatcgacggagaattgctcgaattccaactaggaaaggatgtctgttggttttctttttttgttggcttgattggtgtttcgtgatgttcttgctgttgttctttgttctcggttgtaattttgggggtaaaagatgtgggtttttactgcgtacgattagtatgatctgcgccatctgacgcttttttctcgatgcagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggaggggctcgagctcagttgcttggaggatggcggcggcggcggtggtgatgccaatggcggtggattcagtggaggagcagaagaagggctgtaccggctctcctctgttggagaagaggtgcgaggattcaggagccttcatgcccatagattgccgtctttgttgtgaactatcgtcgtgctattcgtttgtgttcttgggttcacatgcatgctttagctctttttctcgataacacagtcctttcggcatggcggcaagcgatagtggaggcttagtgctaggaggaatcaagaataaatgtccatgtgggcctctagggtcttactagtggagctgaggttcacatcagtagtgtccgggaagtggctatgttggaatgtttttgtgcttcaattataggcagatcgatgtgtgttgaatgacggtgtttatcagttgtttgatagctaaaaggttccattgcaacggtagaatttcatgagacacggatggaagacgaatctttgctgcgaccatcctgttgctacatgtagagttgagaatcactagaacagtgcatgcttcttttgataattgatagtgactatgaatgtttcatcaggatatgacagtgaaatcgataatgttcaaggtagccttttggctgcttcgtcaaaagcctattctttgcttgtttaagtccaattataattccttttgatagttcatcaagctatagctgtatagcttctggctatggaatctttggtttggttagttttctagcacacttttccttgtgttgcttggcccaatgctcatttgctctggaactcaaagagaactattactgcattttgggatcaatagcataattgggcaaaaaccatataatctagttcgttacaaaatgctgcactgcttcaactgttggctgtattgccatttcttaaatgcttgagttgctctcgcattctctgctgcattgttgatagattgcattgccaatgattactatttagcagacttaaaattttcttgaggatcaaatgatggtttttattgtccatgtcatgtcatgtaagcctaagcttacaggttaacacttctagctttgagcaattgcaatttataacttttatatttttgttggttggattaaaaggtttttggggggttgaattgaaatagttaatgtgcttgtctaaatagccaattggagtttattgtgatgggcaaaatttatgtttaatattacattgcaattggccatcaatctttgaactgctcaggctctacaaggagttatggatgcatgcatgtttgagcaccctgcattctatacatgcccttttttttttaattttgtagcactttcaatttctacttccctccttagattatagatttactatcattttcagtgttgtggagttattctgattcaatttactatgttctgcagattgataatctgagtaacttgtccgatattgatgatcttgcgagcacttttgcaaaggtttgtttcacaagctccactgttttaaattgaggttccattattaaaaaaaaatgcttttgcagtaacccttggaagtattagatatgttaaggatacttatgctttaccattgttggctaagtggttactctaattcttccgtaatccattctcgtatcaagaaatgttttccccagaaaggttgcatcttcaggctgcatgtcactaatccccccaccttccaccccacaaggctaagctaacttaaacatcaagtgcacattttattcatttgtagttgtagctatctgcctatttccactacaactagtcctgcctgctgccaagcatgtacgggataaatgacacatggttagtcaagtcctttggctgaatctagcttcttctggcattgcaataatctgttttgcaatctgcaagtattttgccgcatctaaggcccaattgtacatagaagatctagatacatctgtaatgtctgaagttgttttggattgattagcttggctgttgttctttttctaaggatattttatatcatattgcttagttgaagcccatgcaaccaatggattaggaattcaggataatcactaatgaggcctcaacttttatctatacctgacaaattgcttgcatatggaaccgtaacttcataatattttgttctagccttaaaaacttatgtttttgttgtatgcgttcgttctgctgtcgcacactgatttatttatatcttttaatgtcagttgaaccgaaccattagtggaacacggaatcctggtgttattggtgacagacgatccatctcaagaggaagtaagtcaatctttgtgtcccaatacaaaactagtcgtgatgagtgttatggagtttgttttgtgtatatccttataaaatgtgatgcccaatctttgtttttaaaagattgttgactaaaaatgttaacatatgcataatcttttgtgcatgtagttccttttttaaatatgttgaagtcggccattttgcgtttcactgctaattgctggtataattttgacttgctatacacagttgtggatttgtatcactcatgtcaatagactattgtaaaaaaaaaaagagaagagaattgtacaaaactattttcaccaagagaaatatggcagcttttgtatgcatctttgttgaaagctatatataatctcacttatgaaatgcttccattctgcattactgcacatgtttccaaaactttaatgccatcaatatcgaccagaagaaggctattttgtgtctattacacccttttgttgaaaaacaactattcttttggaactctgggatgtagccaaagtcaaattaatgcctgaaggctcaacttgttactgaactatgtaaatgcccttttcaggttctctaactgttgattgggctgaagatgtagaatttcctaactgggtagatcaagacattttagaggatgaggaatttcaggaaagtaaaagatggtggtcacagtcacacactctggtgcagcaaggggatgccaaaccattgagccgaacatcttcctatcctcagcaaccactgcagcaccgggcaagtgaacctatcattccaccaaaatctccttcatttacgtcctttccaccgccaggtggtagatcaccttatacttctcaaggccttacacgccatgggagcattccatcacttggtgctggcctgcaaatgggttctccaagcatgtcccttccaagttctccatatcatatagctggactatctcatggactaccgtatggagggagcatgtccttcggcacttcaaatctgcctgtaaacaatccaatgcaaaatgattggccaagccaagccaatctttatgctggggagcaatttaatctactgccgaacatgttacagaaacaaatatcacttccaaatagcccgatgtcatcactgttattttctcaacagcagcagagattggcacaagttcaagtccaaccatcccatcagaattacctaaatttaccacctcacatattttaccaacatcactccccagaattaacaggaagatttgattctgttagcagtgttccttcatcaagagacaagagatcaaggtcaggaagaggaaaacacaacatacgtttttctcaaccattgcctgatactggtaatcaaaatggtgatagtggaggaataaaattcagatctaagtacatgtcatctgaagagatcgaatctatcttaagaatgcaacattcagcaagtcacagcagtgatccttatgtggttgattattaccaccaagcttgcatcgcgaaaaggggtgccaattctaggccaaaggccaattttgccccaacgtcaatgaaagacttgccttccaagtcccgatccagtggtgaccatcatgcatatcttcaggttgatgctgtaggaagagtttccttctcttccatacgtaggcctcgttctcttcttgaagttgaccttccttcatcaagtgatggttctcatgatcagaagtcttctctgagaccattggagaaagaaccaatgctggccgctagagtcactgttgaagatgccctctgccttcttcttgaggtggatgatattgaccgtctgttgcagtctagtcaggcacaggataacagtttccaactgaggcgaagacggcaggtcctccttgaaggtttagctgcatcacttcagcttgttgaccctctcgggccgagcacatcaagccattcatctggattggctgctaaggatgatcttgtttttcttcgcattgtttctcttcctaaaggacgcaagtttttgtcacgttaccttcgacttcttacccctggaagtgagttgacccgtatagtatgcatggctatttttcgacatctgaggtacttgttcgggggtttaccatcagattctagtgcagcagaaacaacagttactcttgcaaagactctttcatcttgtgtgcgccatatggaactaggtgctcttagtgcttgccttgctgctgtggtctgttcacctgagcagccacctctgcgtcctctagctagctctgctggtgatggggcttctcttattattaaatcagtactggatcgagcaactgagttactgactgaccagcatgccgcagccagctatacagtgtcaaaccggactctctggcaggcatcatttgatgctttctttggacttctgacaaaatactgtctcagcaagtatgaaagtattaggcagatgtttaccatgcagtcaccaggctctgtaattggatctgaggtctccaaagcaaccagcagggagatgccggttgagttgctacgtgcaagcctccctcatacaaatgatcagcaacgccagctgctgcttgattttgctcagcgaaccatgccagtgactggttttaatgccagcggtgcaaatggtgggcacatcacctccgagtctgttcctggttgatttagctcaagatgccaaaaagtgtagattgtcaatgcttaaaggacttaaatgtgcttgtctttggatgataattcttttatatctggagacatgcataaccccttcataaggtaaggttgtgtgagcttggagaaagttccatttgctcaggaaaaaatagccttcagattgtgactttaggcttcagattaatctcatagaccaacaatctcctttctgtgggtcatttatatagcacccacctgatatgcatatgtacatgcactgttgtaacactatgcagggatgaactagccgtctcgttggggcgaattttagcttttaacataacattcatatgctcccagtgaagaagacatccaagactagtgggtttagcagcagtggttgtacaggctctggtactttgaggccttcctgtctgtctttttactagtgtggaaggttcctagcgtcaagtgcgtagtagtctggtcttatcatgttttaattaggatcaaaagtgtgttggggataatgaagtggtgatgtttgttaggtttctggaaagatatttaaaatgtcatggagatggccagtgtttccaggtacctactgacactatagtgaggatactggaaactggggctatattatctcttatttatacatggttacaatttgttgtcattttatttcttgcctccaggttactctttgctcaaaaacatttttttagggggaaactctggttgcatcatatactttttaccaggattaaggctgcctgcctttgttgtaagtttgtgtacagtagttattagttgcagccttaaactggatcatttgaatgaagtagttgcagttaacctcgtgtgatggttagatgtatcagtaattctgcatgaaaccctgagcaaatgttagcctcttctggattggacgaattcatggaaattttatggaaattaagctgtacattatgcgattcttgcattcggaagaagccaatatcaatgtgtgacaacagttctcggtttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0517300, RefSeq:Os02g0517300