Os02g0517900

From RiceWiki
Revision as of 02:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0517900| Description = Conserved hypothetical protein| Version = NM_001053497.1 GI:115446364 GeneID:4329482| Length = 3531 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0517900

Description

Conserved hypothetical protein

Version

NM_001053497.1 GI:115446364 GeneID:4329482

Length

3531 bp

Definition

Oryza sativa Japonica Group Os02g0517900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:19675730..19679260

Sequence Coding Region

19677701..19677733,19677816..19677872,19677962..19678120,19678215..19678831,19678931..19678955

Expression

GEO Profiles:Os02g0517900

Genome Context

<gbrowseImage1> name=NC_008395:19675730..19679260 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:19675730..19679260 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatcagcggaagcagctagctgatctgttctcagatattggtgaccagcagaaagagctagtgaggcaaatggggtttgacgggttgctttccatgagactgactaaactgaacaagcaatttggagcatggattctgtgcaagctagacccatcatcaggtaatctgtttgctggatctaaacatgaaatttgtttgacctgtgaggatgtcagcttacttttgggaatcccttgtggacggaagcagattttacctgcaattaaaaacgaggtaaaagatgttaaggcttatatgtgtgaaatctttgagaaagattcatttgacggaataacaattgcaacgattcagaggattttggagaaaaaatttaccaggacaatgactgttcacgaacagattgtattcaagactgcttttataatcttcgttgtaaccaaattcttggctcctcaatctgttaacaatcacatatctataaggtatatgaaggctttggttgatgtagaaaatattcacaagtacaactgggcagaatttgttttgcatgagattaaagatgcagcagcagcactgcaagacaaaatacgccatcgaaaaagcattggttacatcaatggctgcattatactacctgagcttttttatctgcaccatctggattttgggacggacactcctgggcatgaaaacatttcaaggattggcgtgtacaatgactccatgatagcagaattcattgacagggatgtaattctcaagaaccggaaacctttccctgcgtatggaaagatgaagctgcgtaaccgacatgttgaaaaatgcaatcttggccatcctacgggtgcaacagaggctgcccatgtgaatcgaagcttcgacacctga</cdnaseq>

Protein Sequence

<aaseq>MYQRKQLADLFSDIGDQQKELVRQMGFDGLLSMRLTKLNKQFGA WILCKLDPSSGNLFAGSKHEICLTCEDVSLLLGIPCGRKQILPAIKNEVKDVKAYMCE IFEKDSFDGITIATIQRILEKKFTRTMTVHEQIVFKTAFIIFVVTKFLAPQSVNNHIS IRYMKALVDVENIHKYNWAEFVLHEIKDAAAALQDKIRHRKSIGYINGCIILPELFYL HHLDFGTDTPGHENISRIGVYNDSMIAEFIDRDVILKNRKPFPAYGKMKLRNRHVEKC NLGHPTGATEAAHVNRSFDT</aaseq>

Gene Sequence

<dnaseqindica>1528..1560#1389..1445#1141..1299#430..1046#306..330#tttttccggtgagtacagtggaggccatggcgacgatgaacaacacgctgagcgccccaatcttgcgcgacacagtgtgcgtgccgagcgccccgacgacagcgccgtcgaagctcgtggcggccatggatggatttttttcctactattgagtcttttcttgatcccatctgttactaattcattttgttaatggtttgcatttgcagcacctttgcagtcctgcagcaggtgcgaatgtttcaggtggtagtggctctagttctgttctcactagagctctccatgctgctcgagcaagaaagatgtatcagcggaagcagctagctggtattgcagtctcaaattccaaaaaaacaagtggcatcaagggtaaaaaggtagtacaagaaaaaatttacaccaggtgcactcctgctattctctcagatctgttctcagatattggtgaccagcagaaagagctagtgaggcaaatggggtttgacgggttgctttccatgagactgactaaactgaacaagcaatttggagcatggattctgtgcaagctagacccatcatcaggtaatctgtttgctggatctaaacatgaaatttgtttgacctgtgaggatgtcagcttacttttgggaatcccttgtggacggaagcagattttacctgcaattaaaaacgaggtaaaagatgttaaggcttatatgtgtgaaatctttgagaaagattcatttgacggaataacaattgcaacgattcagaggattttggagaaaaaatttaccaggacaatgactgttcacgaacagattgtattcaagactgcttttataatcttcgttgtaaccaaattcttggctcctcaatctgttaacaatcacatatctataaggtatatgaaggctttggttgatgtagaaaatattcacaagtacaactgggcagaatttgttttgcatgagattaaagatgcagcagcagcactgcaagacaaaatacgccatcgaaaaagcattggttacatcaatggctgcattatactacctgaggtgagattatcctagtattcgttggaattctttgccttttactttctgctatactcgcatcaacttttcacatgctataatttatactgctcagcttttttatctgcaccatctggattttgggacggacactcctgggcatgaaaacatttcaaggattggcgtgtacaatgactccatgatagcagaattcattgacagggatgtaattctcaagaaccggaaacctttccctgcgtatggaaagatgaaggtaaaatcaagtctcctacaagtagtatattcatattgacaattcccgaatgcagaaagttcagacttttggatttttttttgtttcagctgcgtaaccgacatgttgaaaaatgcaatcttggccatcctacgggtgcaacagaggtgcaatctcatgaagtttgttaatctattccatattaaaaaatccatttgcgataataattgttaatatacatgtgcataggctgcccatgtgaatcgaagcttcgacacctgaacggacatcgagcccccaagctttgatctaggtattacacaagatatcgaagatgcaaacatggtggcatgtaccccaggtcatgacatctccaaggtggttgaagactctgagaaagcacaagaactcaaagcacataccccagatcaggcaatctcgaagttagtacaagcctctgacgaagctggagaggataatgcggtgtagaaaactcccttttctcagagcggtaattatccccaccggcctgtttctaatttttattttcattcataaccaaccacatgatactacttagtttgactgttctgaatcataacaggttaccgccaaacaaaacttagtagtttctctccgcactctttgctaaaagagacgagtggtgcgaggatttacatgcgtgaggagtacgcatgtacaaagttcccacctaaatccaagaggagaattatcggaggtccttctgatatcctattcgatcggccaaagaggtctattaaaccaagccgttcggtgaaatcaccatttctgagcaagcaacactctttcgtcagacatgacttgaaggcacttgatgatttatacacctatgtaacttcaatcactgatgaagaagctgttaagtaagccacctatccgaaatgtttcattctttggtacaaccatcatttataatacatatatcacatttaccaggaaaatttgggttcacatctctcaacctgtccctatgtcattaagcctacatgacatacagcaggctattcggctagacactcaaatgcaagaagaaacattcaatgttgcagttcaagttttggcatcatatgagatacatagatttggagggacatatttcgtaggctggagacatttcttaaaccaggattttgcagtaagtgcttgtagttacactcaactattttaattcatattttaaaggtctaaatattttaatatggccctgtagatgtttgcaactgctagtgatgacctatggaacccagaggatcatctaccatcattcaaagatgactccctgataccatatgacctaccaagttgccacctggtatgtcatttttcagcgtcttgaaaaattaattacgtcaagtgcaaatgtgcaggccactaacttttgcattctcaacattattctgtagatatttattccactccttcaacctctgcactattctctttacgcatttgatatggggaaaaacaattatgcatcctcgacccactgagagacgcctcgaaaagatcggaggatactgcagaaagacactccaaaacaaagattcacatttcaaatgctctgaaggagtgcatgaatcttgcatttccggattgggacgaggatataccaaactgggtttctgagttcccttcgaccataccagctttaaataacaggttcgagttgataatcccgatttgatctaaattaatattttcattctactcaaatttgggcattactatacttacattatgctaggctggattgtgcctttcatgtgctatactacatgagaaactgggatggaactcgtcttgtcaacccctcattaactgtgataacaacaggatcaaggaaatcttcgaaaggagtttctgtccaacttgctgtcattcaagaaaaacgaggctattctgccggacttcgtcactcacggcctaaagttatctaagaagatatgagcatgttatgcaagcaagccagaatagttgcagcatttttctttcgaaaatttcttagttcagaataatttatgtctggtataactgtattcaaggctatatgtacccagctattctttttacaaattaaggattctgtcattatccttccaaacgtcataaatccagggtataccaaaatcaaatccatgttcatttaagggttaatttgatccatgtcactgtaaatttggctattcagaaaaatgccattacaatttgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0517900, RefSeq:Os02g0517900