Os02g0527900

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0527900| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001053541.2 GI:297599337 GeneID:432952...")
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Gene Name

Os02g0527900

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001053541.2 GI:297599337 GeneID:4329529

Length

6063 bp

Definition

Oryza sativa Japonica Group Os02g0527900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20200030..20206092

Sequence Coding Region

20200030..20201594,20206041..20206092

Expression

GEO Profiles:Os02g0527900

Genome Context

<gbrowseImage1> name=NC_008395:20200030..20206092 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20200030..20206092 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagcggtgaggtgttttgtggtgttgtgcgtggctgtggcggcggcgctggcttctttgggtggcggtgcggttgatgcggcggcggcggcggcggcggcgcaggagatgcggcgaggcttctcggcggcgcacgaccggtcctactcgcagttcgagcaggtgctgtccgaccccaccggcgtcttcgccctcggcttcctccgcgtcaactccaccatgctcgacctcgccgtggtccacctcccgtcctcgttcccgctctggagctccatccccgaccgccccgcgcagtggtccgcgcccgcttcgctctccttcgacggcgacctcgtcctcaccgaccccgccgccaacaaggtcctctggtccgccggggccgccgccggagccggcggcgaccgcgtggtgctcctcaacacctccaacctccaaatccagagcggcggcggcggcggcgacggcggctcgtcgcccggtatcgtgtggcagagcttcgatgccccatcggagaccatcgtgcaaggccagaacctcacctccgcggcggcgctctacacctccgaccgccgcttctccatgcggatggggaccagctacttcgggctctacatcgagccgcccgcgtcgtcgtccggcggcggcggcgtcgcggcagcgatgtactggaagcacacggcgctgcaggccaaggccgcgatcgtggacggcggcggcccgacgtacgcgcgcgtggagcccgacggctacctcgccatgtaccagaaggaagggccacccgccgaagtcctctccttcgacaccttcaaccatggcgtgcgggcgctccgccgcatgacgctcgaggccgacggcaacctccgcgcctactactgggacagcaccggctcccggtgggtgctcgactacaccgccatcaccgatccgtgcggcctgccaagcacctgcggcgcctacgccgtctgcgtgccgcccagcggccggtgcgcgtgcctggccaacgcgacggacggctcgggatgcgccgccgcaaacgtcggcggcggcggcggcctctgcggccgcacgggcggcgaggtgggcgggctgtactgggaggtgcggaggcagcgcgtggagccggcgaacaaggaattcctgccgttcgagcactcgccgtcggcggcggactgcgaggtgcggtgcgcgcgcaactgcagctgctggggcgccgtctacagcaacggcacggggtactgctacctcatggactacccggcgcagatgatggtggccgccgacgagaggaaggtggggtacttcaaggtgaggagcctggaggaggcggcggcggcgagcgggggcgggagggcggccggtgtcaaggcggcgctgcttgccgtcggcgtgacggtgctggtcgccgcggccgcgttcggggcgtacagggtgtggaagcggaggtgccggacggccgtggacgccaggcggcaggtcgtcgccgacgacgaggggctctcgccgggcccgtacaagaacctcggatccttcagctccgtcgagctctccagctccttccggagctcgagaagcatgacactaaatagaatgcgacgtccatggctccaccattag</cdnaseq>

Protein Sequence

<aaseq>MEAVRCFVVLCVAVAAALASLGGGAVDAAAAAAAAQEMRRGFSA AHDRSYSQFEQVLSDPTGVFALGFLRVNSTMLDLAVVHLPSSFPLWSSIPDRPAQWSA PASLSFDGDLVLTDPAANKVLWSAGAAAGAGGDRVVLLNTSNLQIQSGGGGGDGGSSP GIVWQSFDAPSETIVQGQNLTSAAALYTSDRRFSMRMGTSYFGLYIEPPASSSGGGGV AAAMYWKHTALQAKAAIVDGGGPTYARVEPDGYLAMYQKEGPPAEVLSFDTFNHGVRA LRRMTLEADGNLRAYYWDSTGSRWVLDYTAITDPCGLPSTCGAYAVCVPPSGRCACLA NATDGSGCAAANVGGGGGLCGRTGGEVGGLYWEVRRQRVEPANKEFLPFEHSPSAADC EVRCARNCSCWGAVYSNGTGYCYLMDYPAQMMVAADERKVGYFKVRSLEEAAAASGGG RAAGVKAALLAVGVTVLVAAAAFGAYRVWKRRCRTAVDARRQVVADDEGLSPGPYKNL GSFSSVELSSSFRSSRSMTLNRMRRPWLHH</aaseq>

Gene Sequence

<dnaseqindica>1..1565#6012..6063#atggaagcggtgaggtgttttgtggtgttgtgcgtggctgtggcggcggcgctggcttctttgggtggcggtgcggttgatgcggcggcggcggcggcggcggcgcaggagatgcggcgaggcttctcggcggcgcacgaccggtcctactcgcagttcgagcaggtgctgtccgaccccaccggcgtcttcgccctcggcttcctccgcgtcaactccaccatgctcgacctcgccgtggtccacctcccgtcctcgttcccgctctggagctccatccccgaccgccccgcgcagtggtccgcgcccgcttcgctctccttcgacggcgacctcgtcctcaccgaccccgccgccaacaaggtcctctggtccgccggggccgccgccggagccggcggcgaccgcgtggtgctcctcaacacctccaacctccaaatccagagcggcggcggcggcggcgacggcggctcgtcgcccggtatcgtgtggcagagcttcgatgccccatcggagaccatcgtgcaaggccagaacctcacctccgcggcggcgctctacacctccgaccgccgcttctccatgcggatggggaccagctacttcgggctctacatcgagccgcccgcgtcgtcgtccggcggcggcggcgtcgcggcagcgatgtactggaagcacacggcgctgcaggccaaggccgcgatcgtggacggcggcggcccgacgtacgcgcgcgtggagcccgacggctacctcgccatgtaccagaaggaagggccacccgccgaagtcctctccttcgacaccttcaaccatggcgtgcgggcgctccgccgcatgacgctcgaggccgacggcaacctccgcgcctactactgggacagcaccggctcccggtgggtgctcgactacaccgccatcaccgatccgtgcggcctgccaagcacctgcggcgcctacgccgtctgcgtgccgcccagcggccggtgcgcgtgcctggccaacgcgacggacggctcgggatgcgccgccgcaaacgtcggcggcggcggcggcctctgcggccgcacgggcggcgaggtgggcgggctgtactgggaggtgcggaggcagcgcgtggagccggcgaacaaggaattcctgccgttcgagcactcgccgtcggcggcggactgcgaggtgcggtgcgcgcgcaactgcagctgctggggcgccgtctacagcaacggcacggggtactgctacctcatggactacccggcgcagatgatggtggccgccgacgagaggaaggtggggtacttcaaggtgaggagcctggaggaggcggcggcggcgagcgggggcgggagggcggccggtgtcaaggcggcgctgcttgccgtcggcgtgacggtgctggtcgccgcggccgcgttcggggcgtacagggtgtggaagcggaggtgccggacggccgtggacgccaggcggcaggtcgtcgccgacgacgaggggctctcgccgggcccgtacaagaacctcggatccttcagctccgtcgagctctccagctccttccggaggtagccagccagccacctgagatgtggtgtgattgattagatcgatgagatcgctgggaaacagacgccgtggacggagaaggcaaggcaaagggcggcggcggcggccgctgatcggaagaggcaggcccaaattacggtggcgatgacttgggctagtgggctacttctgtttttggagggaatgagggatgtctcttgtatgatttcggccagttttgatcttttcgttaggcccatcatattatcctcgggccattttctttcctgtacaaatttgcccctccatctaaaaaaaggaaatttcttccatgctatggtgatttgtgaacacattggtccccatcgtttggcttatttctaataagccaaaacgacttattaaaaaataaaaataaatttatagatgaaacttttataaatgtgttgtttgtgacttaaaagccaatgttataaaagaaactacgttgaaaatatcttaaaatcaatctcaaaattaagtttgaaaattcaaaatttggctttttttaggtgattaggccatccgatgggagccattataccatctcatcaagtcattattatgcaaaatttaccgtcagattatacatcatgcaaaattgtaatgtcagaatttacacggatactccctccatttcaaaatataagacacaaccacccttgacccaaagactaaaaaacaattattatcgcctctttgtttgaatcaatccaactaatacaatacatgaacccaatagaattaaacatattgtgagtgtacatttaaaaaacaataatttaggagaggagagatgctaattaattactatgcatacatgcatgcattatattataaaacacctttaaaaagtagttgtgccctatattttggaacggaaggagtaactgttaatcttgtcttaccaacgttaaaacacagggagcttaactgattagtcttgagcaattttgaacttaaaacacagggggcttgactgattaaattcggcaaattttgaactcaaggggcttaactgattaaactaacacaggggacttgactgattaattaaacttgggcaaattttgaactcaagaattggcagtgcttgctgcaaagtgcggaagggcctaactgctaaaataagggtaacttataagaaataaagtggtcttttatgcaaaagccgaggagctgaactgcaaaatccaaggagcaaaatttaaatttgaagaattggcaggggccgcgcgaacgcgtaccccctctaccacaaattatgacgtccactctcccacttggggagatggtaagccagcgcacccaccaagtgcaatgtgggccactagcctaggccatgacccttcatgatcggccatagaccccgtccaggtaagtatggagcaacggtgcacctggccttggttttatagcgtgctctcccgccccagcctcctcgaacaagcgatgtggtactaaaaaaacgctcctgcgtgctgcggtttggaagccggggaattcgagtccggacacagcatatgggccgtattgtgtgcaggccttctcgtttgggccagatttatacatacaccccgaagagcagcagaagagagtaaaaaggaataagttcacttcatgaccctcaaatgtgatcgaaatctaatccatgaccctaaactacaaaaccggatatctcgacccccaatctcctaaaaacggtgcaatttgactccctgggcagttttgggaggcagttttgctgacgtggcgcctacgtggcaatattgaccgagtctttattacaagtggcgttgacgtggcacctacgtggcggtagaaataaaaaatatgcgtgggacccgtttgtcattttcacacataaaaaatatgggggccactgacatatgggccccacatgtcatcctccttccttcttcctccctctctccttctctctctttcctccccttcttcggtgtggggagcggcggtgatggtcgatggcggtggggacgaggtggtggggagcggcagctgtggcggtggggatgaggcggaagggagtggcggctgtttcggtggggacgaagcagtggggggcggcggcagtcggtggccatggggacgaggcggtggggagtgacatctgtggtggtggggacgaggcggaggggagtgacggcagggagcggcggtcaggaggagtggcgatggtggtggggacgaggcggaggggagcggcgacggctgtggcggtggggagcggcggctgtggccgtggggacgagacggagaggagcggtggtagctgtgggtgtggggagcggttctccggcgagtgtcacgctcatggcgctgatcgacgagatggggtcggcgtcatggaggaagtcgaccggcgggggttgcccttggcgtcgtcaatggctgaagatggaggcggaggttgaaggcggcggtccacgcgctcgaagccagcggcgcagccgtgctggcgtggaagagggaggcggccacttggggccgctgcgagacgagcaggacggcggcggcggcggccacaagttccggccttcgagcgcccgccaccgccgccgctccggccttccaccgctcgccgccgccgctcgagcccactgccgccgccgctcccgctgccgccacatgtgagaaagagagagaagggagtgagggaggaggaaggaggactgacatgtgggccccacatgtcagtgagcccacatttctttttgtgtgaatgactaatgggtcccacgtatattttttatttctaccgccacgtatgtgccacgtcaacgccacgtgtaacaaagacccagtcaatattgccacgtaggcaccacgtggcgccacgtcagcaaaaccgcctcccaaaaccgcccagagagtcaaattgcactggttttagaagtttgagggtcgagatatcaggttctatagtttagggtcatggattagatttcgatcacatttgtagggtcgtgaagtgaacttattccgagtaaaaataccaacttttccaatcttataaggacaacatgtgaaatgatcaaatcaagtccattggattcaagaatgtacatgcaagtatactacgaagcgggaaaaaaaaactaccatggctcgaactagaactgaaatcagaagcctgtaaaaacaatgttaataacaattaaacaagactggcccctacgtgatcctaaacacatcataatcccttctcgaccaaccatccatctggcgtataacagctggtacacgtgtcagactacagcactgcttcgctgcctctctatgcaacagtagtcatcgatggcccgcggcagcggcaggaggaggaggatgaggatgttcttctgcctgtccgccggcggcggcggacggcgcgggctgctcatcggagacgacgatctccagccggtcgtctgcggctgccgccggttggagcgcgtcggcgtccgacgacgaggacgcggtggcggagagctgctgctgctgctgccggaaggttgcacgcgcgggggccggggtggagggcctggcggcggcgggggggcagtagaggggcggcggcagcatggcggcgggggaggggggtgggtgcttggcgttggcggcggcggcgcggagggaggcgcggcagacggggcaggtggagtgctgcctgagccaggcgtcgatgcaggcgacgtggaaggcgtggccgcaggaggggagcacgcgcaccacgtccttcgcctcgtactcctccaggcacaccgggcacctgcgcgcgcgcgccaagattacgtcagttttacccccccccccccccccccaacagcaaattaagccgacatcagaaaccgtattgtcttgctttttctataaaaaaaaggatataaattgttttagaacaatttagagttttgttatttgctcacggcattcttaattcaattcggcactttgtgcgacaaggaacatatacccacccataaaaaatatttaatatatattgaagtgaaaaatatgtgcaatgagtagtacttaaaaaataatcatatttatcgagagaaagaggagttaagataaacggaaccaagcgtgggaagctaattaattcattgtattgatttctcattggcaatcaatataaattcaccagtatatacaaatattcatttaattaagatataagtaacaatacgacactataaaatgcttctctagagcaccacataattaatgaactattatgacgatatatcaggttccttttaaggccctttttctgctgaatggaatataaacgatatatgcaaaaaaaaattgaatggttgaataattggtgatacttatttaagagtatacacgaatttattaactattataaaatttaaaatggatttaaaacaatattttaagaatttcatatgtagctcgagaagcatgacactaaatagaatgcgacgtccatggctccaccattag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0527900, RefSeq:Os02g0527900