Os02g0529500

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0529500| Description = Similar to SNAP25-like protein C (Fragment)| Version = NM_001053548.1 GI:115446466 GeneID:4329538| Length = 2379 bp|...")
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Gene Name

Os02g0529500

Description

Similar to SNAP25-like protein C (Fragment)

Version

NM_001053548.1 GI:115446466 GeneID:4329538

Length

2379 bp

Definition

Oryza sativa Japonica Group Os02g0529500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20301897..20304275

Sequence Coding Region

20302269..20302634,20303076..20303169,20303273..20303394,20303501..20303598,20303929..20304028

Expression

GEO Profiles:Os02g0529500

Genome Context

<gbrowseImage1> name=NC_008395:20301897..20304275 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20301897..20304275 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggtgtcacgtggcggcaaggccgcttcgtcgaaggccgaccccttcgactcggactcggactcggacctggtcccgaagaagaagccgggggcgtacacggcgcccagcggcgcggcgaaggcgcggtacaaggacgacttccgcgactcgggcgggctggagcagcagtcggtgcaggagctggagaactacgcggcgtacaaggccgaggagacgaccgacgcgctgggcggctgcctccgcatcgccgagaacatcagggaggacgccgccaacacgctcgtcaccctcaacaagcagggccagcagatcagccgcacccacgagaaggccgtcgaaatcgaccaggacctctccaagggcgagtcgcttctggggagccttggagggttcttctccaagccatggaagcccaagaaaacaaggcagatcaagggtccagcccatgtctcggatgattccttcaaaaagaaggcgagccacatcgagcagagggagaagctagggctgagccctagtgggaagtcggctaatcgcagctacgccgagcctaccaccgccatggagaaagttcaggtggagaaacaaaagcaggatgatgccctagatgatctcagtggtgtgcttgggcagctcaagggcatggcttgtgacatgggttcagagcttgataggcaaaacaaagcgctggatgatctgcaaggcgatgtggatgaactcaactcgagggtgaaaggagcaaaccaacgtgcacgcaagctaatcgagaagtag</cdnaseq>

Protein Sequence

<aaseq>MPVSRGGKAASSKADPFDSDSDSDLVPKKKPGAYTAPSGAAKAR YKDDFRDSGGLEQQSVQELENYAAYKAEETTDALGGCLRIAENIREDAANTLVTLNKQ GQQISRTHEKAVEIDQDLSKGESLLGSLGGFFSKPWKPKKTRQIKGPAHVSDDSFKKK ASHIEQREKLGLSPSGKSANRSYAEPTTAMEKVQVEKQKQDDALDDLSGVLGQLKGMA CDMGSELDRQNKALDDLQGDVDELNSRVKGANQRARKLIEK</aaseq>

Gene Sequence

<dnaseqindica>373..738#1180..1273#1377..1498#1605..1702#2033..2132#agaagttcagtttctaataaagggagatctattgcctcctcttttgccctccaagggggaggaggatcagggagaaagggagggccaaacaatacaaaaagaattactgcaggtttaatttggccgatctctcatgccaatttctcgtcttgtaattaatatctccagcagttcatgtatttgctttgtttaatcgttcgtgctgtgatggttccttcctctttaattttatccattttttttgtatgggaaaatttcttcatctttggagtcttttttttttttttgcaaatttgcagtgtgacatgcatgggctgtttggttttgcaggaaccctagggattataattagcgagttaacggcaaattaagatgccggtgtcacgtggcggcaaggccgcttcgtcgaaggccgaccccttcgactcggactcggactcggacctggtcccgaagaagaagccgggggcgtacacggcgcccagcggcgcggcgaaggcgcggtacaaggacgacttccgcgactcgggcgggctggagcagcagtcggtgcaggagctggagaactacgcggcgtacaaggccgaggagacgaccgacgcgctgggcggctgcctccgcatcgccgagaacatcagggaggacgccgccaacacgctcgtcaccctcaacaagcagggccagcagatcagccgcacccacgagaaggccgtcgaaatcgaccaggacctctccaaggtcaatagcttgattttgaatctttttttcccttctgaaaaaatgatcatgctatgtacttcatccgtttcatattataagtcgtttgatttttttcttaatcaaacttaatttttaaagtttgatcaagtttgttgaaaaatatagtagtatttttaacgcaaaacaaacatattatgaaaatatattcaatgttagatttaatgaaactaatttgatattttagatatgctactatatttttctataagtttagtcaaacttaaaaaaatttgaaaacaaagtcaaacgattataatatgaaacggagtgagaagtataatgcattgccgtcttgattcctgacaaaattcagttagcattgccaatgtcgtgccaaagttgaggatttcatgtgagaatgtatgatggttttgatgatggctttgctcttgtgtatagggcgagtcgcttctggggagccttggagggttcttctccaagccatggaagcccaagaaaacaaggcagatcaagggtccagcccatgtctcgggtacgaactcaaacatatatctgcatcgaaaaattcaattcccagttcgatcatgtgctctcactgttctttggcatataaatggcgatatgatatgtttcagatgattccttcaaaaagaaggcgagccacatcgagcagagggagaagctagggctgagccctagtgggaagtcggctaatcgcagctacgccgagcctaccaccgccatggagaaagttcaggtttaatctcgatctctctgccgccatcgcaaaaaaaataaaaaaaatcagagatttgtctagcatagctagcatccattatcttcaattctttttggttttgcaggtggagaaacaaaagcaggatgatgccctagatgatctcagtggtgtgcttgggcagctcaagggcatggcttgtgacatgggttcagagcttgataggtgagttaactccttaatttattcagaaaaagacagattttttttttaccggtgaaatatatatttttttcaagaacacaaaggcagaagctctgcctcattttattgataaagaaaagatacacatagacttaagaaaagattcacactaaaaacactatcctataagcataaagatcattccccaaagctacactaaacccctgataataacaaagcaaccaaaacacctgtaacacccaacacctaatagttcaagataggataatactcctgttctgctagtggtttcaaatggagtttcactatgttaaccaacatacatttcaggcaaaacaaagcgctggatgatctgcaaggcgatgtggatgaactcaactcgagggtgaaaggagcaaaccaacgtgcacgcaagctaatcgagaagtaggctggaaacatgggacgatcagctttgcctaattgccttgatctgcagtgcattggggaaaatgttaaaagagtcgtcctcgctggcacagcttctgcttatcaattaactgggttttgttttgtattaccgggggcatatatattttttctgtttcttaattttcacgatggctgttttcttgacgatcaaagttgtatactgtatgtacatatatgagaaagagaaattacatattgttgacatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0529500, RefSeq:Os02g0529500