Os02g0532900

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0532900| Description = Glycoside hydrolase, family 17 protein| Version = NM_001053562.1 GI:115446494 GeneID:4329553| Length = 3968 bp| Def...")
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Gene Name

Os02g0532900

Description

Glycoside hydrolase, family 17 protein

Version

NM_001053562.1 GI:115446494 GeneID:4329553

Length

3968 bp

Definition

Oryza sativa Japonica Group Os02g0532900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20477105..20481072

Sequence Coding Region

20477228..20477312,20478963..20479996,20480734..20480790

Expression

GEO Profiles:Os02g0532900

Genome Context

<gbrowseImage1> name=NC_008395:20477105..20481072 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20477105..20481072 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcagcgagagcggcgtcgtgcacccccgccgcttgcgctgtgttggtcatccccatcctagtcctgatcatggcagggcaagtgcgagtcgcggaggcgctgtccatcggcgtgaactacgggcagatcgcgaacaacctcccgtcgccgtcgcgggtgtcgtggctgctccggtcgctcaagatcagcaaggtgaagctgttcgacgccgacccgcacgtcctgcgcgcgttcctcggcacgggcgtggagttcgtggtcggcatcggcaacgaggccgtcccggcgatggccagccccgcggcggcggagtcgtggctgcagctgcacgtggtgccgcacctccgcgccggcgcgcgcatcacctgcatcaccgtcggcaacgaggtgttcaagggcaacgacaccgccctccaggccagcctcctcccggcgttgcggtccgtgcaccaggcgctcggcgcgctcggcctccagggccgcgtcaacgtcaccaccgcgcactcgctggacatcatgggcgtgtcctacccgccgtccgccggtgcgttccacccctccgccgcgccgcacctgcagccgttcctggccttcctgtcggcggcgagggcgccgttcctcatcaactgctacccgtacttcgcctacaaggacgacccggcgcgcgtgccgctggagtacgtgctgttccagcccaacgccggcgtcgtcgacccgcgcacgaggctcgtctacgacaacatgctgtacgcgcaggtggacgccgtgtacgcggcgatccaggcgatggggcacacggacatcgacgtgaaggtgtcggagaccgggtggccgtcccgcggcgaccccgacgaggccggcgcgacgcccgagaacgccgggacgtacatcgggaacctcctccggaggatcgagatgaagcagggcacgccgctgcggccgcaggcgcccatcgacgtctacgtcttcgcgctcttcaacgagaacctcaagcccggcccggcgtcggagcggaactacggcctcttctaccccgacggcacgccggtctacaacgtcggcctccgcggctacctcccgcccatggcatcacacgaggcagcgacccaggtgatccattggttcctacttatcgccaccgcatcggtcgttttcgccttatcgtga</cdnaseq>

Protein Sequence

<aaseq>MATAARAASCTPAACAVLVIPILVLIMAGQVRVAEALSIGVNYG QIANNLPSPSRVSWLLRSLKISKVKLFDADPHVLRAFLGTGVEFVVGIGNEAVPAMAS PAAAESWLQLHVVPHLRAGARITCITVGNEVFKGNDTALQASLLPALRSVHQALGALG LQGRVNVTTAHSLDIMGVSYPPSAGAFHPSAAPHLQPFLAFLSAARAPFLINCYPYFA YKDDPARVPLEYVLFQPNAGVVDPRTRLVYDNMLYAQVDAVYAAIQAMGHTDIDVKVS ETGWPSRGDPDEAGATPENAGTYIGNLLRRIEMKQGTPLRPQAPIDVYVFALFNENLK PGPASERNYGLFYPDGTPVYNVGLRGYLPPMASHEAATQVIHWFLLIATASVVFALS</aaseq>

Gene Sequence

<dnaseqindica>124..208#1859..2892#3630..3686#agctccaagcctatccaagtggaacgcaacagaggcgtcgtctcctcctctcctcgacctctcgcggttggaggtctcgcgcgcgcgtgaggcaacaagtgcccgttcgatcgaccggcaaggatggcgacggcagcgagagcggcgtcgtgcacccccgccgcttgcgctgtgttggtcatccccatcctagtcctgatcatggcaggtgagttcttcgctcaatctagctcacgatcgagcagtgcttctgcaaattaatctctcctcgatcccccttcagctaagctgtctcgcttcaagctagcagcttatactggttcatcagaaagagacgatggaaattttgtgtgttttagttgctatgcatttcacaattaagttcgttcttgcaaattggggatacgatgctagctgcatttcgttggtttttatctggattagcaggtgcatttgccgatattatatcatgtgattgtgattagtaatgcgcagctctttaagacctcaactatggctaggtgctccatggcgtaagacaccgcgcccactaaggctacaaaaccaaatcaccatataaaatccatctcatttctagaagatccttctattgggtatcaatcttcagttttctatcaattctttacaagcaaagtaagcaacaatagtcgggtatatttccctttactccgctccatttttttactttttccccctccaattctgtttttgctcgtcttatctggtcatgagctgtatgtggtttttctttctccacaaagttcctctggaaagagcatttgttcatcatttattattcgcaccgtacccgccagctgaatttggtttgataggcgagttgcaacttgaaaatataggtgaaaacaaagcacagggctcgacactgcacgccgcattggaataattgagttggttagtacgtagtactactattagttcttggcaggatgccttggtggctcatccaccacatgtccatgtggtccagtgaaatcttgcttcccattggatcacgcgcactgtgtatcttgtatattgtattatatctaaaatttctttattcttcatccggggaaataaattctttattcttctacaggattaattagtccagggtaataatagtgtccaattgtaaacacattgtatcttaagaactgagcataactccgttgacgtggtgtaaggttttcccccaacccacctgagtttgaatcctaaacccagcatgtttctcatgatagcactaatgtatatattactccctccgttgtaggttataagatgttttgactttagtcaaagtcaatctactttaagtttgatcaaatttatagaaaaaaatagtaatatttttgaaccaagataaatttattataaaaatatatttaattattaatttaataaaactaatttgataatgtaaatattgctatatttgaatataaacttagttaaaccaaaacatcttataatctggaattttataacctgaaacggagggagtacttttattccgatgtgcctgcattcattgcactcatgatgataatcaagtttgagctgagctagctgttgcaatctcaaggatgaccaaaaatattacatgaatgagattccgtgtttttcactgcattctatttctcagcaccatagcacatcagaacaaataaatgaacaatgatgatgatcactcggaaaattaaacttgacaaaatgcagcaaaatatacagtggcacattttcctcgcagacagaaccatggctcatttttgcatgtatatatgcgtctaatgcaattgctggtcactgaccgtgacaaatcgcatgcatgcagggcaagtgcgagtcgcggaggcgctgtccatcggcgtgaactacgggcagatcgcgaacaacctcccgtcgccgtcgcgggtgtcgtggctgctccggtcgctcaagatcagcaaggtgaagctgttcgacgccgacccgcacgtcctgcgcgcgttcctcggcacgggcgtggagttcgtggtcggcatcggcaacgaggccgtcccggcgatggccagccccgcggcggcggagtcgtggctgcagctgcacgtggtgccgcacctccgcgccggcgcgcgcatcacctgcatcaccgtcggcaacgaggtgttcaagggcaacgacaccgccctccaggccagcctcctcccggcgttgcggtccgtgcaccaggcgctcggcgcgctcggcctccagggccgcgtcaacgtcaccaccgcgcactcgctggacatcatgggcgtgtcctacccgccgtccgccggtgcgttccacccctccgccgcgccgcacctgcagccgttcctggccttcctgtcggcggcgagggcgccgttcctcatcaactgctacccgtacttcgcctacaaggacgacccggcgcgcgtgccgctggagtacgtgctgttccagcccaacgccggcgtcgtcgacccgcgcacgaggctcgtctacgacaacatgctgtacgcgcaggtggacgccgtgtacgcggcgatccaggcgatggggcacacggacatcgacgtgaaggtgtcggagaccgggtggccgtcccgcggcgaccccgacgaggccggcgcgacgcccgagaacgccgggacgtacatcgggaacctcctccggaggatcgagatgaagcagggcacgccgctgcggccgcaggcgcccatcgacgtctacgtcttcgcgctcttcaacgagaacctcaagcccggcccggcgtcggagcggaactacggcctcttctaccccgacggcacgccggtctacaacgtcggcctccgcggctacctcccgcccatggcatcacacgaggcagcgacccaggtaagacggattactcccacattaccattcttttttcgattacatggaagacacacgtgtgttgcgacatcatacgcatagatcagcggtaaaatcttgattgtgcaaagtttttttttccttgattacacggtacacgcgcacacacacacaccagtacaaacgcaacttcacacttacatccaccagtgtttcccaatagagatgaaaaccaacgttacattcttgatctcactaaattcatatgaaagcatatttgcgtaagtataatatttataacattggaatttaaatccataatctcaccatcacatgacatgtgcttattccataaagatcatactgaaatgacactcacgtacttttttttgtctaaaaaacttaacctatgtgaggatttgatataacctactataacgaatctggatagcgtgggttgcgttcaatcatcacctagatcaggcagtcagctatgctttcacctgattgctctcaaaacattttacgtgatgtacgttgtactactgagatagtgaggtggcaatgtgacagagataaaaggccgttggcatttggcaggcaaggaatagaattctccaccaattgaagtgtcccatccgcttgcacttactagcaaaatgcatcatcaaactcaatattatactcctaagttctcttgtgaacctgtcctttacatgagccttgacaagtcatctacctttgtgtcttttttgcaggtgatccattggttcctacttatcgccaccgcatcggtcgttttcgccttatcgtgacagtatcagccactgtacttagtgagtcgtgacaactgcagttaacgggggtgccattcagaagctgaaaatggcttcgcagtgatattagattagaggatagatctaacagaaatttggaaagtattaacccaccaggcttgcactgcctttcgtcttacagtgttacagaggaagagtcatacagaagaattgtcattggtcgataatacatagcaaatcatcagttgtaagcgtatcacattcttttgggatttataaatgatcttgttctattctggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0532900, RefSeq:Os02g0532900