Os02g0534800

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Revision as of 02:33, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0534800| Description = Similar to 40S ribosomal protein S14 (Clone MCH2)| Version = NM_001053571.1 GI:115446512 GeneID:4329563| Length = 31...")
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Gene Name

Os02g0534800

Description

Similar to 40S ribosomal protein S14 (Clone MCH2)

Version

NM_001053571.1 GI:115446512 GeneID:4329563

Length

3101 bp

Definition

Oryza sativa Japonica Group Os02g0534800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20568230..20571330

Sequence Coding Region

20568605..20568672,20569683..20569812,20569887..20569972,20570878..20570923,20571026..20571148
,20571247..20571249

Expression

GEO Profiles:Os02g0534800

Genome Context

<gbrowseImage1> name=NC_008395:20568230..20571330 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20568230..20571330 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgggaggaagaagacacgggagcccaaggaggagaacgtcaccctcggcccgaccgtgcgcgagggcgagtacgtcttcggcgtcgcccacatcttcgcctccttcaacgacaccttcatccatgtcaccgatctgtccgggagggagacgctcgtccgcatcactggtggcatgaaggttaaagctgatcgcgacgaatcttccccttatgctgctatgcttgcttcacaggatgttgctcaaagatgcaaggagcttggaataactgctttgcatatcaagctccgtgctactggtggtaacaagacaaaaacccctggtcctggtgctcagtccgcacttagagcacttgctcgatctggcatgaagattggtcgtattgaggatgttactccagtgccgactgatagcacacgcagaaagggtggtagaaggggtaggaggctgtaa</cdnaseq>

Protein Sequence

<aaseq>MSGRKKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHV TDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGG NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL</aaseq>

Gene Sequence

<dnaseqindica>2659..2726#1519..1648#1359..1444#408..453#183..305#82..84#cccttgagctagggttttatcgccgccgccgccgcttctccactctcccctgcccccgtcgccgtcgccaccgccgccgccatggtatgtttcctgtgacacacactatctctctctgctctcctcatgttaggccgaatgatgcgttgcgatgaccatggtgctgcgtttgcggttgacagtccgggaggaagaagacacgggagcccaaggaggagaacgtcaccctcggcccgaccgtgcgcgagggcgagtacgtcttcggcgtcgcccacatcttcgcctccttcaacgacaccttcatcgtcagatcccgccctccctctcctccccccctttcccgttcgattggtcgattgggattttttttttttgcttacccctgtgcgattttggttgcgttgcagcatgtcaccgatctgtccgggagggagacgctcgtccgcatcactggtaaaatcctcccctcctaagccccttccccgtttatctcgctctctatgccgatgtgatgcattaggggttgcttattgtctgaaatggtggagacaatttgtgtttttgagttcatgtcgcgatgttttttttttgctcatttgttaagcacggcccttaagatcgcctccctttcgtcacgtgggagcgtttcgagtcatagctgtgctaaagtaacaatgagggacctcggagtttttctttggtccttccctcttcctgttttgttctaggtatctccatctcagcttgtgtatcccttggtgtggctcggacttttatcagtcgcaattttgtgctgattgcctgagctgttcaccctgggaagcctcggtgaattgaatggagatgtctatattatgggagtggacatggtttatttttcttcaagaatgtatttttatttgcccacgctctgtgtgtatatataacttattaccgcattttctgttagacgtaattattgtaggatgttgtgaatatatcagttgagattggtaaaaagttcatgatagcaatcaggcagtttcacagttaatttaaattatcgtgtagtcattagaaaatagttgtttttgttttcagagaaatggtctcatttttgtctttactgtggatgttgctgtcattttctttataaacttgaattatttctgtggttatctttgttaaccggttgtgcgacggacttaagttaaatgggtgaaatcacaacttaattttacatgcttaagattaatatcagattgaccatttaatataatttatatattcattctagatgtgtcttttgtaggctgttatcattttctttgttataacaatgttcagttgttttaatatgttaattgtttgttgtcaaggtggcatgaaggttaaagctgatcgcgacgaatcttccccttatgctgctatgcttgcttcacaggatgttgctcaaagatgcaaggtatccccctactttggtcaagataatactgttgtttgtcagttaatgattaatgccttgtatccattttgtaggagcttggaataactgctttgcatatcaagctccgtgctactggtggtaacaagacaaaaacccctggtcctggtgctcagtccgcacttagagcacttgctcgatctggcatgaagattggtcgtattggtaagcatacaaacatttatttttctgcatgatgcttgctgatatatttgttggatgatggttggtttatttgtttattctgtttgaactgttggcctgttctgttctaatattattggacagcatgaagtctgcaccaggaggagcacttcaatgttaaaattttattgaaacaaatcctgcatgtaaaatatcaacgtataagcattgtttagtttataacttgtttcaatgctatatcaacaaataaataatatatagtttaaccactctacattatgaatcaattagacagaatggtaagatcatttgattggagacaaattccaattgaaatctgcttgttctttttggatcgtttggattcatgctttttatattgctggtttgtttaccgtacagtactccctggtgttctagcattattttgcactcgactgtataagttataattcacttttaagaatgtggtatgaatgaacatagtgaatataagtatgcaatatggacatgcatcaacctaatgctagtcaatgaaatgttagcgcaactagaatgttcaacaagtgtctcatattaacataatgctttggtttctcaaaatatgtcacggcctttcaaagtgtatatattatataggattctcagtgtaactgtaataagtagctgtgaatcctcctgcagtcctttgttcagtcatgaatcgaccatgtttctatcattgctcaagtttacagttgggataacagacctttacttgcatactcttattttccaagagcataatttggcaatgcctttccttgctttttatgtcattctgttcgtattttccttgataataggaaggcaatgaacacttcttttgtatttactcgaatggaaatttacagaagaaacatctgtacttgcatctgttcttttgtggcctagttgaactctatttcgaatgtatgctgtttcattgtaattttcagctgatgacgtcttgtcaattttctgtcatacagaggatgttactccagtgccgactgatagcacacgcagaaagggtggtagaaggggtaggaggctgtaatcttcatgcggcctcaaaccgacaacactctgctctcctagatgttaccgtctgcattggactattttgtttctgtgcttttcattcggtggattatttaaaccagttttgaactctgtttctgcatcaattcatgctgtcctcaatgtaaccaacgttatctgcttcgaccggtgaacatactcctgttggattacttgagcatatgccactacaggccggacactgctttcgttgtttattcgggagagcatggcaaacttgggagatgaaaacctggaaaatggtgcgaggataatgggcataactgtaaaatagtgcgttttgtacgaaaactttatatatgaaagttgttttaaaatttcaggttaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0534800, RefSeq:Os02g0534800