Os02g0548700

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0548700| Description = U box domain containing protein| Version = NM_001053620.2 GI:297599399 GeneID:4329616| Length = 1254 bp| Definition...")
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Gene Name

Os02g0548700

Description

U box domain containing protein

Version

NM_001053620.2 GI:297599399 GeneID:4329616

Length

1254 bp

Definition

Oryza sativa Japonica Group Os02g0548700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21446213..21447466

Sequence Coding Region

21446213..21447466

Expression

GEO Profiles:Os02g0548700

Genome Context

<gbrowseImage1> name=NC_008395:21446213..21447466 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21446213..21447466 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggggagcgtgccgctggcgctgggcctggacacggcgggggtgcaggtgccctggtacttccggtgccccatctccctggagctgatgcgcgacccggtgacggtgtccaccggccagacctacgaccgcgccagcatcgagtcgtgggtggccaccggcaacaccacctgccccgtcacccgctccccgctcgaccgcgccttcaccctcatccccaaccacaccctccgccgcctcatccaggactggtgcgtcgcccaccgctccctcggcgtcgagcgcatccccaccccgaagcagccagccgaccccgacctcatccgctccctcctcgcccagtgccccgcgctcccgccgctccgcaagctcagggcgctcgcccgggactccgacaagaaccgcctcgtcatggccacccacgagacacgggcggcgctcgttgacatggcgtttgggacgaacgctggtggggaggaggtcgaggccgaggcgatggcggttcttgctatggttgggttgggtgaggctgaggctgtggaggtggtggggaggagggagagggtggcgaggctcggggagctgctggtgagtggggaaggggcggcgacgacgacggcgacgctggagtgcagggttaatgctggggctgtggtggaggcggttgcggcggtgtccggcgcggacgccagggcggtgctgggcgcggcggagggggtcatggaggggctcgtcgcgctggtcgaggagaaggcccacgcgcgcgccgtccgcgtcgggatccgtggactgttcgcgctctgcctcgccaaggagaaccgcccccgcgccgtcgccgccggtgccgcggcggcgctcgcgcgtcgcgtcgcggagggaggcggtggcgcgggggagccggagcgcgcgctggccgcggtggagcggctgtgccggacggagggcgggcgcgacgcggtggtcgcgggcgccgggggaggcgcggcggcggtgtgcgcgctggtgcgcgccatgtccgggcggtcagcggagcacgcggcgggggcgctggtggcggtggtgggcggatcggagccgctccaggtggaggcggtccgcgcgggcgccatgagccagctcctcctcatggtgcagggcgggtgctcggagcgggcgaagcggaaggcgcagcacctgctcaagctgctccggtcggcgtggcccgccgccgactccatcgccaactccgacgacttcctccaaccatactaa</cdnaseq>

Protein Sequence

<aaseq>MPGSVPLALGLDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYD RASIESWVATGNTTCPVTRSPLDRAFTLIPNHTLRRLIQDWCVAHRSLGVERIPTPKQ PADPDLIRSLLAQCPALPPLRKLRALARDSDKNRLVMATHETRAALVDMAFGTNAGGE EVEAEAMAVLAMVGLGEAEAVEVVGRRERVARLGELLVSGEGAATTTATLECRVNAGA VVEAVAAVSGADARAVLGAAEGVMEGLVALVEEKAHARAVRVGIRGLFALCLAKENRP RAVAAGAAAALARRVAEGGGGAGEPERALAAVERLCRTEGGRDAVVAGAGGGAAAVCA LVRAMSGRSAEHAAGALVAVVGGSEPLQVEAVRAGAMSQLLLMVQGGCSERAKRKAQH LLKLLRSAWPAADSIANSDDFLQPY</aaseq>

Gene Sequence

<dnaseqindica>1..1254#atgccggggagcgtgccgctggcgctgggcctggacacggcgggggtgcaggtgccctggtacttccggtgccccatctccctggagctgatgcgcgacccggtgacggtgtccaccggccagacctacgaccgcgccagcatcgagtcgtgggtggccaccggcaacaccacctgccccgtcacccgctccccgctcgaccgcgccttcaccctcatccccaaccacaccctccgccgcctcatccaggactggtgcgtcgcccaccgctccctcggcgtcgagcgcatccccaccccgaagcagccagccgaccccgacctcatccgctccctcctcgcccagtgccccgcgctcccgccgctccgcaagctcagggcgctcgcccgggactccgacaagaaccgcctcgtcatggccacccacgagacacgggcggcgctcgttgacatggcgtttgggacgaacgctggtggggaggaggtcgaggccgaggcgatggcggttcttgctatggttgggttgggtgaggctgaggctgtggaggtggtggggaggagggagagggtggcgaggctcggggagctgctggtgagtggggaaggggcggcgacgacgacggcgacgctggagtgcagggttaatgctggggctgtggtggaggcggttgcggcggtgtccggcgcggacgccagggcggtgctgggcgcggcggagggggtcatggaggggctcgtcgcgctggtcgaggagaaggcccacgcgcgcgccgtccgcgtcgggatccgtggactgttcgcgctctgcctcgccaaggagaaccgcccccgcgccgtcgccgccggtgccgcggcggcgctcgcgcgtcgcgtcgcggagggaggcggtggcgcgggggagccggagcgcgcgctggccgcggtggagcggctgtgccggacggagggcgggcgcgacgcggtggtcgcgggcgccgggggaggcgcggcggcggtgtgcgcgctggtgcgcgccatgtccgggcggtcagcggagcacgcggcgggggcgctggtggcggtggtgggcggatcggagccgctccaggtggaggcggtccgcgcgggcgccatgagccagctcctcctcatggtgcagggcgggtgctcggagcgggcgaagcggaaggcgcagcacctgctcaagctgctccggtcggcgtggcccgccgccgactccatcgccaactccgacgacttcctccaaccatactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0548700, RefSeq:Os02g0548700