Os02g0549200

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0549200| Description = Similar to Ser Thr specific protein kinase-like protein| Version = NM_001053622.1 GI:115446614 GeneID:4329618| Lengt...")
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Gene Name

Os02g0549200

Description

Similar to Ser Thr specific protein kinase-like protein

Version

NM_001053622.1 GI:115446614 GeneID:4329618

Length

3067 bp

Definition

Oryza sativa Japonica Group Os02g0549200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21481055..21484121

Sequence Coding Region

21481345..21481979,21482319..21482423,21482520..21482642,21482726..21482896,21482978..21483107
,21483187..21483396,21483748..21483894

Expression

GEO Profiles:Os02g0549200

Genome Context

<gbrowseImage1> name=NC_008395:21481055..21484121 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21481055..21484121 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggactcggagctgtcccagagcacggtggtgttcgggctccgcatgtgggtgctcgtcggcgtggccgtcggcgcggcgttcgtgctgttcctcgtgctcctctccgtgctatgcctcctcgcttctcgccgccgccggcggcggcgggggccgaacacctccccggtgcagcagctccccgtctccgccccgcccaagaacccccagaaggtcaaggcgcccaaggacatccaggaagtccccgcccaggccaccgccgccgccgcggcgaagacgccgctcgcccaggtgctccagatgcccgcgccgccgccgccgccgccgccgatggcggcggcggcaccgcctccggagaccgtccagatcgccaccggcaaggagcaccgcattacgtacccggagccgccgcaccgcagcggctcgtcgtcgcacggcagcggcgaggcgccgtcggtgccggaggtgtcccacctcgggtggggccactggtacacgctcaaggagctggaggcggcgaccgagatgttcgccgacgagaacgtgatcggcgagggcgggtacggcatcgtgtaccacggcgtgctcgagaacggcacccaggtcgccgtcaagaacttgctcaacaacagggggcaagcagagaaggaattcaaggtcgaggtcgaagcgattgggcgtgtgcggcacaagaacttagtgcggcttctaggatactgcgcagagggcaatcagaggatgcttgtgtatgagtatgtcgacaacgggaacctagagcagtggctccatggggaagttggacctgtaagccctctttcgtgggattccagggtgaagattatactgggaacggcgaaagggttaatgtatttgcatgagggacttgagccgaaggtggttcaccgtgatgtcaagtcgagcaacatcctccttgataagcactggaatgctaagctctctgattttggtctagcaaagcttctaggctcagagcggagttatgtcactacacgagttatgggaactttcgggtatgttgctccagagtatgcagggactggaatgctaaacgaaacaagcgatgtatatagttttggaattcttatcatggaaataatatccggtcgagtaccggtggattataataggccaccaggagaggttaatttggttgattggctgaagacgatggtgagcacccggaattctgagggggtcgttgatccaaagatgcctcagaagcctacctctagagctctgaagaaggctttgctagtggcattgcggtgtgtagacccagatgctcgtaagaggccaaagatcggccatgtcattcacatgcttgaagttgatgatttcccgtatagagatgaacgacgaggcgctcgagctccggtgcaggcaagagtggctgacaaaccggtggccattgaagcaggcgaccgtgaatccgacagcagcggtaacaacagcgcgcgacaaaccgaacccttcagatggagaaacccagagtcctag</cdnaseq>

Protein Sequence

<aaseq>MSDSELSQSTVVFGLRMWVLVGVAVGAAFVLFLVLLSVLCLLAS RRRRRRRGPNTSPVQQLPVSAPPKNPQKVKAPKDIQEVPAQATAAAAAKTPLAQVLQM PAPPPPPPPMAAAAPPPETVQIATGKEHRITYPEPPHRSGSSSHGSGEAPSVPEVSHL GWGHWYTLKELEAATEMFADENVIGEGGYGIVYHGVLENGTQVAVKNLLNNRGQAEKE FKVEVEAIGRVRHKNLVRLLGYCAEGNQRMLVYEYVDNGNLEQWLHGEVGPVSPLSWD SRVKIILGTAKGLMYLHEGLEPKVVHRDVKSSNILLDKHWNAKLSDFGLAKLLGSERS YVTTRVMGTFGYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRPPGEVNLV DWLKTMVSTRNSEGVVDPKMPQKPTSRALKKALLVALRCVDPDARKRPKIGHVIHMLE VDDFPYRDERRGARAPVQARVADKPVAIEAGDRESDSSGNNSARQTEPFRWRNPES</aaseq>

Gene Sequence

<dnaseqindica>291..925#1265..1369#1466..1588#1672..1842#1924..2053#2133..2342#2694..2840#acatcatatgtcctcaccagaatccaaaattttcatcacaccaaaccatccaccgctcatcacttttcccccaagcaaatccaatctttgcaaccacattgttgttgtttctcccccacaacatcctcttccttttctttccttttttttttcccgtttttgcgtccaatcgcccaacgaatccaaccaaattcgctgttcttgccttcttcttttgtgttcaagaatccaaaagttgatgttgttttgagctcaattttgctcgagaaaagctcgaggaaggtgctcccatgtcggactcggagctgtcccagagcacggtggtgttcgggctccgcatgtgggtgctcgtcggcgtggccgtcggcgcggcgttcgtgctgttcctcgtgctcctctccgtgctatgcctcctcgcttctcgccgccgccggcggcggcgggggccgaacacctccccggtgcagcagctccccgtctccgccccgcccaagaacccccagaaggtcaaggcgcccaaggacatccaggaagtccccgcccaggccaccgccgccgccgcggcgaagacgccgctcgcccaggtgctccagatgcccgcgccgccgccgccgccgccgccgatggcggcggcggcaccgcctccggagaccgtccagatcgccaccggcaaggagcaccgcattacgtacccggagccgccgcaccgcagcggctcgtcgtcgcacggcagcggcgaggcgccgtcggtgccggaggtgtcccacctcgggtggggccactggtacacgctcaaggagctggaggcggcgaccgagatgttcgccgacgagaacgtgatcggcgagggcgggtacggcatcgtgtaccacggcgtgctcgagaacggcacccaggtcgccgtcaagaacttgctcaacaacaggtaccctaccactaatagtagtcaactccgttgcactgaaattactacagctacccaacttgattgtcttcgtgtgattgccacggggattgatcatccaagaacaggtttgtggcgtcaattgcgggtggataatgatgcaatttctgataacagttactagcattttgtattccaaattgggaagcatgtttattatactacaattcggttacatttgatggtagtacctttggttggtagtactttacagttactgaattctgttcaatttagcatgtctggctttctgtaatgaaatttagtaaattttgtatgcttgtcttgttgagttgatagggggcaagcagagaaggaattcaaggtcgaggtcgaagcgattgggcgtgtgcggcacaagaacttagtgcggcttctaggatactgcgcagagggcaatcagaggtattttcttgcatgtgcacattatttggtaaccttgttgaattgcaaaatcaaaaggtttgataatgtaaatggtgtttatgtggctctgaccaggatgcttgtgtatgagtatgtcgacaacgggaacctagagcagtggctccatggggaagttggacctgtaagccctctttcgtgggattccagggtgaagattatactgggaacggcgaaagggtctgtgccttgtatctcattgttgcggcccagtgaatcttgctgccattctatctgtttacataaattctgctgttctgtaggttaatgtatttgcatgagggacttgagccgaaggtggttcaccgtgatgtcaagtcgagcaacatcctccttgataagcactggaatgctaagctctctgattttggtctagcaaagcttctaggctcagagcggagttatgtcactacacgagttatgggaactttcgggttagattcggcacactatgaacatacccctagaatcccagatgaatgttcatggttactaattttttccactctctacaggtatgttgctccagagtatgcagggactggaatgctaaacgaaacaagcgatgtatatagttttggaattcttatcatggaaataatatccggtcgagtaccggtggattataataggccaccaggagaggttagcgaccacatattgccaatgctcgtttatgatcttgttaactggatttatcaaatctacagatcaaacttttcaggttaatttggttgattggctgaagacgatggtgagcacccggaattctgagggggtcgttgatccaaagatgcctcagaagcctacctctagagctctgaagaaggctttgctagtggcattgcggtgtgtagacccagatgctcgtaagaggccaaagatcggccatgtcattcacatgcttgaagttgatgatttcccgtatagagatgtaagtcaatagaagtacatatccacctgtttttccagtacttgcctttaattttgggtgaccaatccctgttaacgtttcatcaccaagcttgcttaacgttccttcagaccatatgacggaatcatctgaaaagctgatttacgattcttgatttgcatgatatctcacagttcagacacttctgagtttacctgctctaattttcaggggaaagcatttcttgtgttaatcactagcaaatgtattgaggtttcagattatatttgaacttatcctgagggaccataatctgttggatatttcatcagctcatatttatgtcgatttatgtctactttgtgatttcaggaacgacgaggcgctcgagctccggtgcaggcaagagtggctgacaaaccggtggccattgaagcaggcgaccgtgaatccgacagcagcggtaacaacagcgcgcgacaaaccgaacccttcagatggagaaacccagagtcctaggcatttgttcagaaattttcacttgatttcttgaacaagaacagtgtccaccactgaagttgcaaagtgctcatttgttgccttcatcaccatatcatctgtacatgccgaaggaacatattagccctagtaatattttttctcggtttatttatccgattagagacacttttgtatgaaaaaagttactcttctaagttaaaagaaatggagcgtaatcaaatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0549200, RefSeq:Os02g0549200