Os02g0549600

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0549600| Description = Similar to 40S ribosomal protein S10-1| Version = NM_001053623.1 GI:115446616 GeneID:4329619| Length = 2342 bp| Def...")
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Gene Name

Os02g0549600

Description

Similar to 40S ribosomal protein S10-1

Version

NM_001053623.1 GI:115446616 GeneID:4329619

Length

2342 bp

Definition

Oryza sativa Japonica Group Os02g0549600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21507442..21509783

Sequence Coding Region

21507521..21507523,21507618..21507666,21508148..21508430,21508994..21509129,21509482..21509562

Expression

GEO Profiles:Os02g0549600

Genome Context

<gbrowseImage1> name=NC_008395:21507442..21509783 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21507442..21509783 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttctcctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaattaccttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccaggccgcccatttggctctggcccccctggtgatcgcccaaggggcccacctcggttcgaaggggacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggtgattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggagttctggtggtagacctggctttggacgcggtggcggcggtggtttcggtgctggtccaacctcttcctccatggagtga</cdnaseq>

Protein Sequence

<aaseq>MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIK LMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPF GSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSG GRPGFGRGGGGGFGAGPTSSSME</aaseq>

Gene Sequence

<dnaseqindica>80..82#177..225#707..989#1553..1688#2041..2121#gctagggtttcgggttcctcgacctctcgccgccgtcgtcccgcgcgcttggaggtcggcctgctcgacggttgtcgccatggtacgcatctgagcccaaaatcaatgtgtcccgtcggttcaattcgttggtgaatactggcgctgatgttgtggtgtttttttttttctgttagatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaaggttggctcactctgctctccttgattggtttcgatctcattacaaaatggattgcgtaaacaggaaattgggtgattgttttaatccctcgtttaattggaagtttggagtgattgaatagctgctgaatgtatacgaagcgaaagaaatcctaatttgtgcatgtgcttatgtaattctccgtttttttggtttgaagagccaagcgaccaatcaattttaagtttctctaacaaaatataatagaaatgtcaaatactggactgatttatcgatgcaacatgcaagtctgtgctgcattattccacaatcagtaaaggggtacagaaatttcagctttcacctcttggtaacatttccagaatagaaaaatgcttctacataataagaccatatgtcttcatcctatttcgactgatgaactagaaggatattgtttctcatttcttcatttgtttgtgtgcattgtggtgcatcatagagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttctcctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaattaccttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccaggccgcccatttggctctggcccccctggtgatcgcccaaggtcctaattttcttctctcttcaatctttctggggtttcaagtgtaacttacatttaataacttacttgctaatttgaaggttattttatcgcggtttactttggggagcatgagtgaatttagtgttgataactaactcttgttttcagaaacttaggaattgtatatctttgagctctaagcacgtttggtttgtatgcaaatgtgatgacgtttgcattaataatcatgtatttgcattcatatagtggctgaaacaagatgttaaacacacaagtaatacatggtacatttttaactgaaagtagatctatctctatgtgctgtattttaattttaaaagggaaggaaaggtgggttgatgccttgtacttctaacttaataagatccatttttctcatagttcattgtagtcacattgcaactgtaaaaaatgtggatgcaattgtgttcagaactcaaactgaggcatatctgcatgttctgttgaattcttgagctactgtggcaatattttctagttgtcgtttggctgatttctgattcctgtgatgtgtttaggggcccacctcggttcgaaggggacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggtgattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcagggtaatcaatcaattctgcctattattagtgtttcactatgtgaggagataaacatgattattgaatagcaactcgccatcctacataagctaattggaaaagggcataacaactgattttgttgtttaaaattaaactatattacaacattcggatgttccgttcctgctcttactttttttctaacacttgcacttttctttgtttggttttggtgcatatgattaataactggaggatgtttttatttgttcttatttgtattatttatttccaatcttctcatttctcaatgatggtacaccacaccatgatttcactcaaatgatgtttcttgtcctgaaatgtttagagttctggtggtagacctggctttggacgcggtggcggcggtggtttcggtgctggtccaacctcttcctccatggagtgaaaggagctcaggattcttgtcgcaggagacattttagtattcaagttttgcagtggtgtttgcagtagagatcaatgcgtagcacctatgttgaaaccttaagagatgcaagtgtaattctcctggtgttgatggcttgagagtttatcccaaaccctctgtagaagccaatgccaatggaaatatcgttcagctactcagcaatcaagtttttcctcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0549600, RefSeq:Os02g0549600