Os02g0550000

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Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0550000| Description = Conserved hypothetical protein| Version = NM_001053626.2 GI:297599401 GeneID:4329622| Length = 5696 bp| Definition ...")
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Gene Name

Os02g0550000

Description

Conserved hypothetical protein

Version

NM_001053626.2 GI:297599401 GeneID:4329622

Length

5696 bp

Definition

Oryza sativa Japonica Group Os02g0550000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21534277..21539972

Sequence Coding Region

21534726..21536866,21537159..21537339,21537466..21537514,21539669..21539724

Expression

GEO Profiles:Os02g0550000

Genome Context

<gbrowseImage1> name=NC_008395:21534277..21539972 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21534277..21539972 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtaccaccagcaccggagcaggctgccgccgccgccgccgccgccgccgttcgggcgcggcgggggtggcgccgggtacccccgcggacacaagcagctgtacgcgcctccgcctccgccgccgccgcagcatcagcagcagcgaaggtacgaagtgctcatggaggccggccgcctcgcggccgagtacctggtggccaagggcgtgctcccgccgtcctccttgcagcgcggcgtcggggcgtggggcgctccttctcctcctcctcctcctgctgcggcgggggcggcgccgcacccgccgcagcagcagcgggaggacccggcgttctatggccggagaaggtatgatgatgagtatagcaacaactctagcgcccggcctaggaggaacagtagcaacagtagcagcagcagcagcagcagagatgattacagtggtggtagctacaatgggagaggcaagaggaagtatggggattacaggagagggtattcggattgggggagggatagggagaaggagagagggaggccgggttcgaatggccgccgctatgaggagaatgacgatgaggatggggctcctggtttccggagggagcggaggggcagtggagggaatgatgatgcgaggagtagcgttgccgacgtgtatagggaggcaacaccattgatgaggaaggaactaggggatttggaaatgaatggtactgagtcgagggccgcgaatcccagtggtgaagttaaggaagctgatgctccgcagatggtgcagagtgaagagaatgaggaaggtgagatggaggaggatggcatggtgttgaattcggaaccagaggttgtggagctaaggatggacacaaatgatgatgttaataatgcttctgttggtgttgatatggagacagagttgcagcgttcgcccaatggtaacgttccaggtgagaaagccgaagatgacgacaaagttttggttgagtctgctttggacagtattgctttggatgatgaggtggcaaatacggaaaataacttgcacggtgatgagaggaatttgcttaaatactgtgaatatgcaaaagctccaactaagcgcaggtcatcacgtccacaaaggaatgcagcatctgtccaaatagaaccagcagtatctgaaacaaccgatcagatttctattggagaagcttcccagatagtacctggtgaagttgcaaatgagatctcagtgaccaacctcaagtcagaaaatagagaagatcaaatctaccgagaaaacactgactttagcacttcctgcaatggtacattggagccaattcttcttgaagaaaacaatgagtcagctgcgactggaaatataatagaagaaaagaatgatgtacagctccatgtggtcaaggaaccagaggaagaagtaaatgtatctgcattcgcgccttctcacaaggatagcttgatgcaagaaactgacttatctccatcaacggcttctcacaaggatagcttgcttgagggtaacttacccctgttgacagattctcacaatagcttgattgaggaaactggacctccattgacacattcccatgaggatagcatggttgaagaaaccaatctctcgtccttgacaacttctcacaagggcaacttgaaacaggaaacggacttatctcagacaatatcttctcatgagaataacttgaaattgcaatttaaggaaagttgtggcattgatatgctgccacaagatgtagacttgattgaattgtctggtcaacggaaaagtgttggtggtgaactattttccaatgttggagctgaagctgcctccaaaatggaagatgaaaatctagagcaaccaaatccatttaaaatatgcgatcagaacttgattggtagttctgaggtttctgtgatacataataatcctggtttggcccaatgctctacagaaggatcttgcacagagtcacagaaaaaccagcatcaagattttgtaaccacttcaggtgatattgctggtagtacaaataatatgtgccaacttccattagataataagggtgtccaagtaattgatatagaagatgacacaccaattgaagttggtggctttgattcttcaaaagcaaagagcgacatgatatgctctaacatggataacatgatgggccctgttgtacacagtggtgatcttcctggtattcaagatggttacaatcttgcaatttctgattatcttggtggtgatataccatgctacccatcaatgcaatcagatcttcatggtggtataggtgctaatgattctgagggtatcactgtcatggatgatccaatatatgggtctctcactgatattggtttcatggatgtctgggggcagccaacacaggatgactacgagaagttcttctag</cdnaseq>

Protein Sequence

<aaseq>MQYHQHRSRLPPPPPPPPFGRGGGGAGYPRGHKQLYAPPPPPPP QHQQQRRYEVLMEAGRLAAEYLVAKGVLPPSSLQRGVGAWGAPSPPPPPAAAGAAPHP PQQQREDPAFYGRRRYDDEYSNNSSARPRRNSSNSSSSSSSRDDYSGGSYNGRGKRKY GDYRRGYSDWGRDREKERGRPGSNGRRYEENDDEDGAPGFRRERRGSGGNDDARSSVA DVYREATPLMRKELGDLEMNGTESRAANPSGEVKEADAPQMVQSEENEEGEMEEDGMV LNSEPEVVELRMDTNDDVNNASVGVDMETELQRSPNGNVPGEKAEDDDKVLVESALDS IALDDEVANTENNLHGDERNLLKYCEYAKAPTKRRSSRPQRNAASVQIEPAVSETTDQ ISIGEASQIVPGEVANEISVTNLKSENREDQIYRENTDFSTSCNGTLEPILLEENNES AATGNIIEEKNDVQLHVVKEPEEEVNVSAFAPSHKDSLMQETDLSPSTASHKDSLLEG NLPLLTDSHNSLIEETGPPLTHSHEDSMVEETNLSSLTTSHKGNLKQETDLSQTISSH ENNLKLQFKESCGIDMLPQDVDLIELSGQRKSVGGELFSNVGAEAASKMEDENLEQPN PFKICDQNLIGSSEVSVIHNNPGLAQCSTEGSCTESQKNQHQDFVTTSGDIAGSTNNM CQLPLDNKGVQVIDIEDDTPIEVGGFDSSKAKSDMICSNMDNMMGPVVHSGDLPGIQD GYNLAISDYLGGDIPCYPSMQSDLHGGIGANDSEGITVMDDPIYGSLTDIGFMDVWGQ PTQDDYEKFF</aaseq>

Gene Sequence

<dnaseqindica>450..2590#2883..3063#3190..3238#5393..5448#cgaagcagaaacaaacagcgacgccatcgcgtcgcgtcattcttccaatcgagaactcttctccggatttcctggtttttttttcttcttcttcgtcgtcgtcgccccccctcctcttcgattcgtccgtttcccaagagcacaatggaaatcgtaggttttaggaacaggaattcgtattagcgagtggtaattgctgccggttggtggataatcccatttcgatggctcgatcggcggtttaatttgcgaattcgtgagttctttttttattttggattctagggttctcgattcctcctccacgcgagggaaggaaaaagttgcggaaatcgtaatctctttcgttgttgttgcgtccttttggctttaacccgcaggaaaaattgtggtgaatttctcgtggactccggcgcggcaagggtggaggaaggcgtggaccgcgcgcgatgcagtaccaccagcaccggagcaggctgccgccgccgccgccgccgccgccgttcgggcgcggcgggggtggcgccgggtacccccgcggacacaagcagctgtacgcgcctccgcctccgccgccgccgcagcatcagcagcagcgaaggtacgaagtgctcatggaggccggccgcctcgcggccgagtacctggtggccaagggcgtgctcccgccgtcctccttgcagcgcggcgtcggggcgtggggcgctccttctcctcctcctcctcctgctgcggcgggggcggcgccgcacccgccgcagcagcagcgggaggacccggcgttctatggccggagaaggtatgatgatgagtatagcaacaactctagcgcccggcctaggaggaacagtagcaacagtagcagcagcagcagcagcagagatgattacagtggtggtagctacaatgggagaggcaagaggaagtatggggattacaggagagggtattcggattgggggagggatagggagaaggagagagggaggccgggttcgaatggccgccgctatgaggagaatgacgatgaggatggggctcctggtttccggagggagcggaggggcagtggagggaatgatgatgcgaggagtagcgttgccgacgtgtatagggaggcaacaccattgatgaggaaggaactaggggatttggaaatgaatggtactgagtcgagggccgcgaatcccagtggtgaagttaaggaagctgatgctccgcagatggtgcagagtgaagagaatgaggaaggtgagatggaggaggatggcatggtgttgaattcggaaccagaggttgtggagctaaggatggacacaaatgatgatgttaataatgcttctgttggtgttgatatggagacagagttgcagcgttcgcccaatggtaacgttccaggtgagaaagccgaagatgacgacaaagttttggttgagtctgctttggacagtattgctttggatgatgaggtggcaaatacggaaaataacttgcacggtgatgagaggaatttgcttaaatactgtgaatatgcaaaagctccaactaagcgcaggtcatcacgtccacaaaggaatgcagcatctgtccaaatagaaccagcagtatctgaaacaaccgatcagatttctattggagaagcttcccagatagtacctggtgaagttgcaaatgagatctcagtgaccaacctcaagtcagaaaatagagaagatcaaatctaccgagaaaacactgactttagcacttcctgcaatggtacattggagccaattcttcttgaagaaaacaatgagtcagctgcgactggaaatataatagaagaaaagaatgatgtacagctccatgtggtcaaggaaccagaggaagaagtaaatgtatctgcattcgcgccttctcacaaggatagcttgatgcaagaaactgacttatctccatcaacggcttctcacaaggatagcttgcttgagggtaacttacccctgttgacagattctcacaatagcttgattgaggaaactggacctccattgacacattcccatgaggatagcatggttgaagaaaccaatctctcgtccttgacaacttctcacaagggcaacttgaaacaggaaacggacttatctcagacaatatcttctcatgagaataacttgaaattgcaatttaaggaaagttgtggcattgatatgctgccacaagatgtagacttgattgaattgtctggtcaacggaaaagtgttggtggtgaactattttccaatgttggagctgaagctgcctccaaaatggaagatgaaaatctagagcaaccaaatccatttaaaatatgcgatcagaacttgattggtagttctgaggtttctgtgatacataataatcctggtttggcccaatgctctacagaaggatcttgcacagagtcacagaaaaaccagcatcaagattttgtaaccacttcaggtgatattgctggtagtacaaataatatgtgccaacttccattagataataagggtgtccaagtaattgatatagaagatgacacaccaattgaagttggtggctttgattcttcaaaagcaaagtgagttgcttctattccagttatttttcttgtctagcatgctgtttgaatttgttctgtttctaccgtagtgttttctgccccttttattccattagtgttactgtataatggtgtaggaattagttgctagtctccttaaaactatttgtatctctgtttttctttcatggtcaaagagctgtgttaattgttcatgggggccaccttgttgcatcaggacataaataatatgattgttaaatctcatcgtagtgtttgtatttaaaagatataatgtgcttttgatcaggagcgacatgatatgctctaacatggataacatgatgggccctgttgtacacagtggtgatcttcctggtattcaagatggttacaatcttgcaatttctgattatcttggtggtgatataccatgctacccatcaatgcaatcagatcttcatggtggtataggtgctaatgattctgaggtgagacatcctgattagttatcacgtggaggctagtagagttccaagagaactttgcaagaatgtaatattgcactgtatttatttccgtagatgatgttttgatgtttttgttttccttttcagggtatcactgtcatggatgatccaatatatgggtctctcactgatattggtaattgtgactaaactttaagtttccttaatctgcattatctcttttctttcttgttctgtatggccactttgtcagtctaagatacataataagtagttgccattttcagtttaattttttggggggatggaacattctagtactaggctgttctggtgtatggttctggtatagaaacatttacaaacgtgttctattttatatactgtttttatcacatactccatgcagagaaccccagataactccacaattaagtaacagagcatgtattctgattctggattcaatggtccatgatagccaagagtggccatggcaagttggacagcaacagtggtaacgtcaacttgtcatgaagcagcagtagcacgtatgcaggaaggcagtggctagttgattgacttaggaaggggataaaacattagttgtattcccttatggatataccccttcaggaacaaattgttgagatgttcgctggttcctcccaagatactatatctgatgtaattggaagccaaaaataaaaataaaatcacctaaaataaaaatagaaccaggtcctctctcctcaatcacttctcctaccaagcatcatctttagcactttctcctcaatccatgccgtgtggcctcttcaggtggtagttactccatagagtcatcctatacttcactttgtcttgtcgcatacaagttacaagtgagccttgtttagacggcacatgttgaacaaatggggattcctggtggaataacaagacttgacacacattgaaaatcatggatagaaggaccatatatgccaggaaggaaaaggctgtgatggttgtcaacttctctctggtattagaatagttgaaatggcccatagcaacgagatttcgaggcaaaaaaacacacccacatcctttgtgttaggaaagaaaagtagaatgttctagacttccaactgttccagctggaagactctttaatgggtagacccgcaaggtgcagttcctgctaacttcaaaactaagaaaaaatattctctcagtttacaagtgatttcaattaatttggagattaattagacacaacaggagatccacacaatatggagggagcaagtttcgggtcggagtaactctgaattcaatcagaataattaatcactcatgagaaaacacatgtatacactgtaggtctttgtagaacttctacgggcatgattgccatatagaaatccatttatgtccagagtgcctagataattgtgacgaaatcactcttctaaatagcagccttcatgatctcaacatcaggcgccatgaaggcagcaagtaatagtatgtctaccctggtgccatgtgcatatctgtcgaatttcaagatttagaaatccactttagcagccctcgaaaagctttaaaggcctctatagcagccgaaagaaaacatgctcaatatgtagctacaagtagctgaactgggataataactagaaccttattatttgttacttttcgtggaactggaatataggatagcatagaggaacttgcgtgccattactgggatttgaaccagtgatttacagattcatgccattgctttccttttgataattgggcatgtttacccctgtatgagtgggcctcatgttcatgcatccccacagtccaccgcacagaactctaccttcacaaaccacctgatttattatgcccttgtttttctatgcttctcgttctgtacagcaaattactgcatcaaactctgcttctaattttactgaatagatgtttggcacatgagcacaaaacatttgttcattagtacacggcaacagtctatatgtctatatctgccagttatattagactaggaaccaaagtgaatatattggattgtaagagtatactgtgcgccagtgaaatgaacggcaaacgtgtacaacaccttgacaaatagagttgttcaggattacttgatacaccgttcaaatgttggcatggtgttaagttcatttttgttgcaagtgttgccgctttggttttctatggtgtaaccttttgatattgtttagcacttcgaaagtcccatgcatcttttttttcccgattttcgcctagaggctaacctcatatgctattatggtttcaggtttcatggatgtctgggggcagccaacacaggatgactacgagaagttcttctagtccgctgcccaaagaaggctgagattgttgaggaactttacaaataaacctgagtaatcggtagcttaggcgagaataagtaaagtagattgtgccctcgtctcaaagaaaatgctgtatcggtcttagtttagcgttggtactcaggttgttgggggtgaatggtggttgtttaatcagaggtgtagtagaagacatgtgtaaggccaaacagccggacagcacaggatggatagcttttttcttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0550000, RefSeq:Os02g0550000