Os02g0553500

From RiceWiki
Revision as of 02:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0553500| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001053647.2 GI:297599410 GeneID:4329645| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0553500

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001053647.2 GI:297599410 GeneID:4329645

Length

4371 bp

Definition

Oryza sativa Japonica Group Os02g0553500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21736227..21740597

Sequence Coding Region

21738349..21738552,21739202..21739456

Expression

GEO Profiles:Os02g0553500

Genome Context

<gbrowseImage1> name=NC_008395:21736227..21740597 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21736227..21740597 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaataacttggggtaagaatgctaagacgaataggcagccctcagtggcaccatctaagccaggcctaccttttggggtggacagtgacaatgatgagacagaaaaggaggaaacaagagtggttaccacggactgtcctggaacaaagccatctgataatgctgagtccctcaagcaccaggggaacaggctagctgaggaagggaagtaccatgaagcacttggtaagtgggaggctgcacttaccttgatgcccaataatgcaatacttcatgaacagaaagctcagattctacttgagctgggagatgcatggcgtgcactgacagcagcaaccagtatgtatgctcttgttcagtttacttgcccttttaaggattctaatgataacgacctactaggatgccatgagttgggaacagtaccatccttcctaattggattatcattttag</cdnaseq>

Protein Sequence

<aaseq>MKITWGKNAKTNRQPSVAPSKPGLPFGVDSDNDETEKEETRVVT TDCPGTKPSDNAESLKHQGNRLAEEGKYHEALGKWEAALTLMPNNAILHEQKAQILLE LGDAWRALTAATSMYALVQFTCPFKDSNDNDLLGCHELGTVPSFLIGLSF</aaseq>

Gene Sequence

<dnaseqindica>2123..2326#2976..3230#gccgtcgtcgtctctctgctcgccgcttgcctcctcctcctcctcgccggaagctccagccctcctcctcctgcagcagcagcgagcagcgcttccaggcttgatcggtgagtcctccgccagccacccgcggcaccctccctcaaccccatgttgtgatatgatgttgcagccgccgcgaggccggtctgtctctcggccggcgagcggattcttgttgttccaggcgcgcgcgcggcttgtcccgctgttttgcctagcgatctttggtcagtgcagtgctgctcgcctctgtaggcttgagtgagtcggtggccgcaccgcgcacaacttgtttgatgatatgcttgcatgcacaagagcatctccaatcaacagattcccaaaaagagaaccattccctatgtcctcattggtcgtgcttgcctctataacccgttctttttctaattaagatgcagtttcaagttgctctaaaatattaaatatatatatttctcaagtttgtaataattaaaacttaattaattatacactaatggttttcttgttttgtgtgcccttaagttcatcttggttcgaacggggcctatgtgtgtttggtttaattcttcactcctttcaatataattgtttcagatatgctaatggagtagtaattgtgatttgaataaatttgggtttttcatgaaacctttgtaccattaaaaaaatccgtggttgtgtgcaagtatgtgcggttttccggaactttaaccacaaaaaatggggttctctgcaatctactcttcaaattatttattccgagtggctatttttcttatctctacatatttgctcttcatgatggttttcttcctctagcacatcacaatgagaggctttcttatgcatcaactcttggattcgtcatcatcagatgatgatgatgaactcattctggcagcagcactcatagcacaacatcaatatgacattgacaatgcaccacggcgccgtggtggttctgtacgcaggtttgtgttcaggacatttgttttattcgcatttgttgttgctcgtttccattggttcattcttcttctattggcaagtttaaaatgacttgttctctgcatacatgtatatagataccttataacatagtaccaaaaatcactggttccacaagccttcacaatggcacacaacatagcaacttccaatcactcctcttgaacacatttcacagaaaattgcaggttcttaaacttatcccctttttaaaaggaaaaattacattctctaaacaaaagctaacagctcgtgcgaaaatcaaattacgtatgactgtatcccagagctaacagattgcaggcatattctttttcacacctatcagctaacggcaaaaatcacattttccttctgtgcttcatgtgtttttctacaaagattaaccattgctgccaatgtttttccacaaagatcacatgcatatatttctttttcacgacgtatgagaacaaatatatagcaatctgaaagaattgatcacttgccaatctaaatgaattcccaaaaaattgactatagggaatttggtttgggtacctgttggagatgctctaagaggctaacactggttcatcttctgactttagaagttagtagtttgaagttgtcttcatgaatggaggcctatgcgatatccatacgcaaatgggacgaattttataatcagcttgactgcttgagcttgtctcaggtctttagcagtccttttttggttgtgctgcagcctacagataagacaggtgttctattcaaacttgttttctactaatatcaagaacctaagtccaatgcttcaacagatgcccactggtcggagatgttgaaagtattgatgtgtatattatttatagatcagtatggtagtgtgtcactttagtatgagcactacatggaatctgtaggactgttttttctggtgtttttatgtttccctacttaatttgctatgtttttgtagaaatatgggtgttttttttccttcaatggttgagtacgtgaaaggaatgttgcttttctagttaaagaaactgactcctgtcagcccatctcatgtaacagttccaagatgaaaataacttggggtaagaatgctaagacgaataggcagccctcagtggcaccatctaagccaggcctaccttttggggtggacagtgacaatgatgagacagaaaaggaggaaacaagagtggttaccacggactgtcctggaacaaagccatctgataatgctgagtccctcaagcaccaggggaacaggctagctgaggtatctttcttttcttttattttcttttattttcttttcttttcttttaataatcagccaaggtatcctctactctccttatctatgttacatggacaaacttatttatttacttaatattgaaggactcaagtattcattgttttcactgtccctacaaccaaaccaagctctctaggtcattagtcaatatgtcatagactcatagttcatggatattatattggcagttattgatgccctttcattttagaaacacatagtaaagcaaaaaaatgaactgggccgtcccaggtatacacaagatagtccttgaagcctcatacctttttcaatccatatactttggttactaggattctatgaagaaatactccttttctttgtagagaaatatgaagaataatggatctccgtagtccatacttctattcttatagaatatgcaatcagttatcttggatgcacaatttacacttgaaagggacagctggctgtatttcattttttacatcaaattccttttgacagtatgtactagattttatttgcagttggggcctgcacctgcagggttacctaacattcagcacacgctaaacgataatttaaaaggcagataatggttatcttattgttattgttttaggaagggaagtaccatgaagcacttggtaagtgggaggctgcacttaccttgatgcccaataatgcaatacttcatgaacagaaagctcagattctacttgagctgggagatgcatggcgtgcactgacagcagcaaccagtatgtatgctcttgttcagtttacttgcccttttaaggattctaatgataacgacctactaggatgccatgagttgggaacagtaccatccttcctaattggattatcattttagcaccgatttgcggtatctaggatttactcaatccatgttcttttttcccgtcaaaagtgtgttttggtggtacttttaacaggtcattgcaaaatgcataaaacatctataaatagtagggcctcaatcaagaacaaagaagaattactgcattccatacataaaaatgaagaataattttaatttgtgaatgaattactgcgcagttgcctattttggtcacatgtgaagtctatattagtatatgatcccagcagcatatttgtgtcatttccatttctccacttctggtatattaattactctatgtcgggtatgcaggggcaacagaattggatccattatggcctgaggttagtaggcatccccagggcagaaacactactcctggagtattacttaatgcgtgaatcctatcagttctcagcccttatatttatcagcggcatgaatgagatatgttcatatatattgacttgcagggttgggttacacttggcagagcacagttaaattttggggagccagattcagctatattatcttttgacaaggcgttagcaatcgaggtatccattttgctttgcaaccaactgcctgttctgattaccatccatgcatccgttagctgcgatatatatttctaaaacaacaagctatcatatataagtatcttattcccctcaaaaaaaattatataagtatcttacttttcctatttgtttccacagcctgacaacaatgaagcaaagtctgatcgtgaaactgcagcacgtcttgttaagaaacgagggcagctacattcatcaggtctgagtgccaacaaaagacgattcacagttggagaggatagcgaaaaggagaaagacgattcacagatggaggatgtagagaagtgtaaagaggatgaagaaaaggagagagatgattcacaactggagaatgtagagaagtgatttaagtcagatcggggctctcggcctaatttgttagatcgaggcattgtctgaagtagaaatttcgtaggaaaactttaaattcctacattaagacaggtctagatgtatatatatgtagacggacagaaacaatgaaaatgtgctgatcctccagtttaatccagttctttgggttttgggat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0553500, RefSeq:Os02g0553500