Os02g0555900

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0555900| Description = Similar to MAP3Ka| Version = NM_001053660.2 GI:297599420 GeneID:4329659| Length = 5718 bp| Definition = Oryza sativ...")
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Gene Name

Os02g0555900

Description

Similar to MAP3Ka

Version

NM_001053660.2 GI:297599420 GeneID:4329659

Length

5718 bp

Definition

Oryza sativa Japonica Group Os02g0555900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21860354..21866071

Sequence Coding Region

21860354..21860612,21860695..21860813,21861149..21861388,21861532..21861639,21861740..21861799
,21862459..21862534,21862623..21862783,21863190..21863252,21863393..21863480
,21863983..21864483,21865674..21866071

Expression

GEO Profiles:Os02g0555900

Genome Context

<gbrowseImage1> name=NC_008395:21860354..21866071 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21860354..21866071 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctggggtggctgcggaggaagtggaggcggaggcgcgacaagcccgcgggggacgccgccgccgcctctaccacggcgacctcgccgagggactccgtcgacctggggggaacgtccgcgtacccgtccgcctgcgcgtctccatcctccaccacgccgacgccgacgcggtggggcgccggcgccagcgccgtgcccccgcgatgcccggggccacaggaccagcaccacgggctgccgctcccgcggccggtgtccaagtcggcgccgatgcccctggcgtcccccgccgcggcgccgccgtcgccgtcgccgccggcgtgcgcgtcggcggccgagtcggtctcgggcgggagctcgtcggacgacgaggcggatcaccggaattacaggtatacagatccagttgtccacactagcggaaggactgtgctacctgatggtcataatggcatggtagaagagaagcgttttgtatcatgtggtattctccaggagcatcaaaaattctttgaggttcctattgcaaatgtgaacgaagttcatcacatgcaaatctttgaaccttcaacaagtgaatctagttattctcggggcagaatgttgcctgaggatacatttgctgtaagaccaagaagtcattcccctggtccgagagggcatgcttattctgcttgctgcgcaagagattttgggtttaccccaaggtcaccagtgaaaaggatggatgatcctaggagtccatctcaacccttgcctctccctccagttcctgttgctagctcatccattccttcatcttccattacttctagtcaattccaatcacagtggaaaagggggaagctattaggtagcggcacatttggtcaggtttatcttggtttcaacagtgaaaatgggcagttttgtgcaatcaaggaggtgcaggtttttttggacgattcacattcaaaggaacgccttaggcaattgaatcaggaaatagatatgcttaagcagctctcgcaccaaaatatcgtgcaatattatggaagtgaactggctgatgaagctctgtccatctatctggaatatgtttctggaggttcaattcataaattacttagagagtacggtccatttaaggaacctgtgattcgtaattatactcggcagattctttcagggcttgcctacttgcatggtaggaatactgtacacagagacattaaaggagcaaacatacttgtgggccctaatggtgaagtcaaacttgcggactttggcatggctaaacatgtgacatctttcgccgaaatacgctctttcagaggaagcccatactggatggctcctgaggttgtaatgaataacaaaggatataatcttgcggttgatatatggagccttggatgtacaattattgagatggcaaccgcgaagcatccctggtatccgtatgaagatgtggcagcaatatttaaaattgcaaacagtaaagatataccagaaattccagattgtttttccaaagaagggaaagatttcctaagtttgtgcttaaagcgtgatccagtacagaggccttctgcagcttcgttgctgggtcacccttttgtccatgaccatcaggctgtaagagcaccaacatgcaatggtactcagttgagaaatggaatttcttcccctgcagcaagtcatagaaagccaaacagagaatcctcgtcaaggagaaacattgctcctctgcatggtatcgcaggactaagcgcaagggaattcgctggattttccacagcctatccttctcctcacaatacctccagcagcccaactgcagtgagagcaaacatgtctttaccggtgtcgccatgctcaagcccgctgcggcagttcaagcaatcaaactggagctgcctcccttcaccaacgcatccggcgctctcccctggattatcagcagcagcctacccaaacaatcccttgcagaaccagtcgaggcgaagcgccgcagttccagatccctggctggagttgagccagccgagacctccaagcccatatggctctccaaagagattctag</cdnaseq>

Protein Sequence

<aaseq>MPLGWLRRKWRRRRDKPAGDAAAASTTATSPRDSVDLGGTSAYP SACASPSSTTPTPTRWGAGASAVPPRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAP PSPSPPACASAAESVSGGSSSDDEADHRNYRYTDPVVHTSGRTVLPDGHNGMVEEKRF VSCGILQEHQKFFEVPIANVNEVHHMQIFEPSTSESSYSRGRMLPEDTFAVRPRSHSP GPRGHAYSACCARDFGFTPRSPVKRMDDPRSPSQPLPLPPVPVASSSIPSSSITSSQF QSQWKRGKLLGSGTFGQVYLGFNSENGQFCAIKEVQVFLDDSHSKERLRQLNQEIDML KQLSHQNIVQYYGSELADEALSIYLEYVSGGSIHKLLREYGPFKEPVIRNYTRQILSG LAYLHGRNTVHRDIKGANILVGPNGEVKLADFGMAKHVTSFAEIRSFRGSPYWMAPEV VMNNKGYNLAVDIWSLGCTIIEMATAKHPWYPYEDVAAIFKIANSKDIPEIPDCFSKE GKDFLSLCLKRDPVQRPSAASLLGHPFVHDHQAVRAPTCNGTQLRNGISSPAASHRKP NRESSSRRNIAPLHGIAGLSAREFAGFSTAYPSPHNTSSSPTAVRANMSLPVSPCSSP LRQFKQSNWSCLPSPTHPALSPGLSAAAYPNNPLQNQSRRSAAVPDPWLELSQPRPPS PYGSPKRF</aaseq>

Gene Sequence

<dnaseqindica>5460..5718#5259..5377#4684..4923#4433..4540#4273..4332#3538..3613#3289..3449#2820..2882#2592..2679#1589..2089#1..398#atgccgctggggtggctgcggaggaagtggaggcggaggcgcgacaagcccgcgggggacgccgccgccgcctctaccacggcgacctcgccgagggactccgtcgacctggggggaacgtccgcgtacccgtccgcctgcgcgtctccatcctccaccacgccgacgccgacgcggtggggcgccggcgccagcgccgtgcccccgcgatgcccggggccacaggaccagcaccacgggctgccgctcccgcggccggtgtccaagtcggcgccgatgcccctggcgtcccccgccgcggcgccgccgtcgccgtcgccgccggcgtgcgcgtcggcggccgagtcggtctcgggcgggagctcgtcggacgacgaggcggatcaccggaattacaggtgatttgcttcgtactggctgctccgttttacagctaccgacctgctatttttttttcatttttgtttttgtttttgtttcggtttggtcgggtactccaattatgggcgtagctgctacaactccaaaccgtgatcgcaacgaattcgacgcgattaccctttttccagttcgttagtagtaatcacgaagtgtgccgagtgatagtgtgatttaggggtcttgagttgacttctaaaagaccaaactgtgtggagactgaggcttcgcaacaactgccatacggccgttgacctcgtctcttctctcaccgcctatagcgtacaaaaccgtattcctttgtttattactagtataattcggtggacttggggagtcaggctaccaaagcgcgtcaaaagttcaacccatccttcttttttattcattcaattgtatttaagatattttatgctaggatatttatgatattgttaactaacagaatttcccgcgtaatttgtttgcgtggaattcccgcgcaattttgcccagatagaattggatttgatatacaactattcctgctttgataagaacaagtttgtcttatgtaaacctttatcaataaatctgcaccgttgtaatctaaaacagcgcaaatctttctcatctttcgttaacgtggaaattttttaggcatagaacaaacatggcggctacttatagatagatagaatgtctaatgtattcctaacaatcattctatggaaatgaatgctttgttccacttggagacgcaaatctttctcatctttgattagcgtgggaatttcttggcgtagaacaaatacggtggctacttatagataaatagaatatctactgttttcctcacgatcattctatggaaatgacgccgaggtgtttctatgctaggagtagcattatctgttccttcaagaatgatgccagagcataaaagaatgcatctttttatggcgtcaagctaaatttcaacacattgatggttcttttctttctgcctgtagttatagtgcgtgtttcatgcctttgccctttctgatagtgtccctgtttggctctattttgttttctattgaaagatgacctattttgtttttcgacaatctgttcctacagtcctggaagtcctctgatatttcctgtttgttgttggaatctgtaggtatacagatccagttgtccacactagcggaaggactgtgctacctgatggtcataatggcatggtagaagagaagcgttttgtatcatgtggtattctccaggagcatcaaaaattctttgaggttcctattgcaaatgtgaacgaagttcatcacatgcaaatctttgaaccttcaacaagtgaatctagttattctcggggcagaatgttgcctgaggatacatttgctgtaagaccaagaagtcattcccctggtccgagagggcatgcttattctgcttgctgcgcaagagattttgggtttaccccaaggtcaccagtgaaaaggatggatgatcctaggagtccatctcaacccttgcctctccctccagttcctgttgctagctcatccattccttcatcttccattacttctagtcaattccaatcacagtggaaaagggggaagctattaggtagcggcacatttggtcaggtttatcttggtttcaacaggtatggaggtttatcttatagaacattaaaagaataatatggtttcgaagttcacccaaagaagttactatgaatgtgactcattttttcatgtactttgcatccatgcaggttcatctttgaagtttatatagaattttagttctatggctagatcgcagctaaatcctttgtttttctgtctaaggctgtatacccaaaatgttgctatgtgtaatttgattacgtacatgcacaaaagtttgatatttatgtggacccacatgttcaattcggtaggctagaacatagaaaaaggaggagagggggtatgtgaagtcataattatcacatgtatacatggttctatttaatttccttaaacaaaagttgctacacaacacacttttttggcatcacatgagagcatgaaagaaaatcttagaactatttctatgaatctatttcactcttgactcttattgttgccatcttgtgattgatcttaattggcgttgtacagtgaaaatgggcagttttgtgcaatcaaggaggtgcaggtttttttggacgattcacattcaaaggaacgccttaggcaattgaatcaggtcatttgattgccctatacaattgataggctgtgtgtcattttgaacaatttatttttattgtaacacaaacacttttccaacctgtctctgactacatcctgttttggtttattaacttgtccatcttgtaatgacaggaaatagatatgcttaagcagctctcgcaccaaaatatcgtgcaatattatggaagtgaactggtaggttcaatatgattattgactaattgttcaataagcatgtcatgcagccacataattttattctttctcatcttagcatatttgtattgtgcgttgctcattacaagatggatctgtgagggaaaattataacattttttttggtgggaactaatctgatgatgcatagactcactctctggtgcacagagcataaatttatgcatcaattttggttctaatgcttaatcgtgcatgctttgtccttttcctcttttctaaaatcagagggtatacgccctggttccagtttccaccaagaaaggagacaccatcagttttactaattttgtgtgattgttcacttattttctgaaagttctcattaagctttggcttgcctaatttaaacaattttgagcaggctgatgaagctctgtccatctatctggaatatgtttctggaggttcaattcataaattacttagagagtacggtccatttaaggaacctgtgattcgtaattatactcggcagattctttcagggcttgcctacttgcatggtaggaatactgtacacaggtaatgtaaattatcctacactgttagtgattttcatggtaggcactgaatacaatgatcactttgtaaattttatttttgtggacagagacattaaaggagcaaacatacttgtgggccctaatggtgaagtcaaacttgcggactttggcatggctaaacatgtatgcagttatattttcgttcttcccggggttttgcttgtttggttgtgtagaagcatcattaaaacctcactgagaccacagaaagcatttagtagtcatctaactgaatactctctccatactcgtaaaggaagtcgtttaggacaatgtttaagtcaaaccttggaaatataaatcatgaataactctcaagttgttgagtttgaaaatataaaaattatatgtatagatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaacaagaagtcaaaattgtattttggagaccgtgtcgctgtcctaaacgacttcctttacaagtacggagggagtattaagttcctcctctgacagaatgctagatgcaactcagtaaaatgtctttaacattgagcataaacactggcttcctctaagtttgagacttgggagtgataaagatctgtactatgtctataaacttccctttatgttgtgggctggtgatgtcatttctacatgatttaaaaaagatgtctctgatggctatggaagggcttcttcaattcaacaacaaaatgaattccttttgagctttggttgtctcttttatctcatttcaatgcttatgttgaaacaggtgacatctttcgccgaaatacgctctttcagaggaagcccatactggatggctcctgaggtatacggtttcctgtttacaacacttggagcactgtgtcatatgttatgtaatttacttcaccaagaacggtttgtccaactaaatgtaaaacgtgcaggttgtaatgaataacaaaggatataatcttgcggttgatatatggagccttggatgtacaattattgagatggcaaccgcgaagcatccctggtatccgtatgaagatgtatgctacttcgtttaatatttaccaaaatgctttgttccacttggagatgctattctgcctcttttagtgaaaataactggaggactcttgatacttcttttatagttggtgagcctcatgtcagattcttggtcttgcaggtggcagcaatatttaaaattgcaaacagtaaagatataccagaaattccagattgtttttccaaagaagggaaagatttcctaagtttgtgcttaaagcgtgatccagtacagaggccttctgcagcttcgttgctgggtcacccttttgtccatgaccatcaggctgtaagagcaccaacatgcaatggtactcagttgagaaatggaatttcttcccctgcagcaagtcatagaaaggtgagatttctgctcatttgtttttttcagagtcaatgtcgagctcttttactcttttgaagtaccaacaggacatagtagattatatatttctagatgtttacaagatcagaagacctttgtgactgtccattttatttgtatcatcgcatcagatgatggggggcagtagggctgattcatgtgttgcacataattctttttaggaagcttgctttacatatctgttgttgataaattaattacgtgaaaccaggtttaaagactggattacacgacgtaattcccatgtccggacatccttgtcatgtcttcaattttttccccttttgcagccaaacagagaatcctcgtcaaggagaaacattgctcctctgcatggtatcgcaggactaagcgcaagggaattcgctggattttccacagcctatccttctcctcacaatacctccaggtataccattctacctcctgcccatcctttgtttccaagttcatcttgtaacctacttctcaacatggccgtgcacgtgcagcagcccaactgcagtgagagcaaacatgtctttaccggtgtcgccatgctcaagcccgctgcggcagttcaagcaatcaaactggagctgcctcccttcaccaacgcatccggcgctctcccctggattatcagcagcagcctacccaaacaatcccttgcagaaccagtcgaggcgaagcgccgcagttccagatccctggctggagttgagccagccgagacctccaagcccatatggctctccaaagagattctag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0555900, RefSeq:Os02g0555900