Os02g0562400

From RiceWiki
Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0562400| Description = Ankyrin repeat containing protein| Version = NM_001053687.1 GI:115446744 GeneID:4329688| Length = 2978 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0562400

Description

Ankyrin repeat containing protein

Version

NM_001053687.1 GI:115446744 GeneID:4329688

Length

2978 bp

Definition

Oryza sativa Japonica Group Os02g0562400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22183309..22186286

Sequence Coding Region

22183568..22184359,22185549..22185984,22186070..22186284

Expression

GEO Profiles:Os02g0562400

Genome Context

<gbrowseImage1> name=NC_008395:22183309..22186286 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22183309..22186286 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gattatggtttgtccgttgctcttgatgccatttggttcttgcggacggagcaggatcttcaaggtctcaaccatctgataggtaagattgtagaatcaggggcgaaggattttgccagggcaatcctcaggacttcattgctcgcatcttgtgtcgttgcctgccaaagcaaggcgcttactttaggtgatagcaaggaaatcatagctcagagattacatgatcgtctacaagattgtcctggtggtgaacgtttacaaattgaggcaggtgccaaagtgcagaagtttatagaatgggcattgcagtgcattcatctgcatcgttgttctgaagatacagagtgttacaaagcaaactgcagcactcaccaagaggtacagttccatctatcagcgtttaaagccttcttggacatagctggtgacaatctcagtggcaagattttcactgaggcattcgatgcggcctgcttcccacttacactattctcaactttatttgaacctggatggtcttctgggagttcagcagttgccatacaagggcttttgtcattgctggtggaaggaggtgctgagaatgtaaatcagtgttttctagaagcttcacgttttggaagtactgagcttgtacgcattctgctaaagattgctcatcagaacagcttggctgtcgatgtcgatcttgctctagtctatgcttctcactactgcaaatttgaaacgatggcatgcttggtggatgaagggcatgccacatctttcctttgtcccttagtaaaagcttctgagcgtggttgcttgcaggttgtccagtggtttgtcaaccggcatgtttcagacattgagatgtgccttgctgtaacaaccgctgcctcttgcggccacttcgcagttgccacctacctgcttgcgcatatcccccggcatgtcctcgaagccctcagcccacagattctcaaagctgcgaggggacagggtagtgggtcttttgaaggtgtttccttccttctccgttcaaacttcctcaacgatgccgccgctacgtatgcagttgcagacagcattgcgaccacgagtacgatggatattccccaagacctggttgattttctgaaagagcagtggtctcaggccgcatttgctgaaggagtagaggctggggaagatcattttgtgaacatcaccagggttctgaggagaggggcgtctccgatccgcctgcatgacctcccggagcccatggcactcgctatcgcgtacctgccgctgtaccgggcatgcgcgagtgcaagagggcagctgctgccgcagagactgaggggggaactggtcgaggcggttggccggctcggcgttccggtcaacatggaaaacaacaggagagatttcctggcggttttggagcattacttcccatcattcataactggagcttga</cdnaseq>

Protein Sequence

<aaseq>DYGLSVALDAIWFLRTEQDLQGLNHLIGKIVESGAKDFARAILR TSLLASCVVACQSKALTLGDSKEIIAQRLHDRLQDCPGGERLQIEAGAKVQKFIEWAL QCIHLHRCSEDTECYKANCSTHQEVQFHLSAFKAFLDIAGDNLSGKIFTEAFDAACFP LTLFSTLFEPGWSSGSSAVAIQGLLSLLVEGGAENVNQCFLEASRFGSTELVRILLKI AHQNSLAVDVDLALVYASHYCKFETMACLVDEGHATSFLCPLVKASERGCLQVVQWFV NRHVSDIEMCLAVTTAASCGHFAVATYLLAHIPRHVLEALSPQILKAARGQGSGSFEG VSFLLRSNFLNDAAATYAVADSIATTSTMDIPQDLVDFLKEQWSQAAFAEGVEAGEDH FVNITRVLRRGASPIRLHDLPEPMALAIAYLPLYRACASARGQLLPQRLRGELVEAVG RLGVPVNMENNRRDFLAVLEHYFPSFITGA</aaseq>

Gene Sequence

<dnaseqindica>1928..2719#303..738#3..217#tggattatggtttgtccgttgctcttgatgccatttggttcttgcggacggagcaggatcttcaaggtctcaaccatctgataggtaagattgtagaatcaggggcgaaggattttgccagggcaatcctcaggacttcattgctcgcatcttgtgtcgttgcctgccaaagcaaggcgcttactttaggtgatagcaaggaaatcatagctcagaggtaaccacaaattgcatactgtttcttccacgatattctgtttaccatcattgttgatgttagttcttttggttttcaaatttagattacatgatcgtctacaagattgtcctggtggtgaacgtttacaaattgaggcaggtgccaaagtgcagaagtttatagaatgggcattgcagtgcattcatctgcatcgttgttctgaagatacagagtgttacaaagcaaactgcagcactcaccaagaggtacagttccatctatcagcgtttaaagccttcttggacatagctggtgacaatctcagtggcaagattttcactgaggcattcgatgcggcctgcttcccacttacactattctcaactttatttgaacctggatggtcttctgggagttcagcagttgccatacaagggcttttgtcattgctggtggaaggaggtgctgagaatgtaaatcagtgttttctagaagcttcacgttttggaagtactgagcttgtacgcattctgctaaaggtaattgcaattgtttgtattgttttcggtgatctgaagacttaaaactgttttatttcatattgcggtaaatgagcacattagtggcattttatttttgctattctagaagcccttggtttgcaattgtggccaacatatccatctatgcactagtgttttctaattctggtctctcgttacagtgggaaatatatccgagcattcaaactagtgcgcttttaccatgggcaaatagttggagataatattttttgttcattgtatttagacatgattatagtgccactgcaaatattgggtcagttatttacttcttttgtatgacattggaaagtccccaggtccctgaaacgttgccacatactccctccattccaaattgatctatatatttcataggtacaccaagaccaagaaaagctaataactctcttatactatatttactctagcaacaaacttgatgcatgcaccatccccactatttcctagccaatagcaaatcaagatattgcatgtgggttataaatacttatgtgcatggatgcatgcatcaatgtccatttactccaatgcacaaataacgaatagacctaatgaataaacacaaatatgtagatcatttaggaataacctcaaaaaaactatatgtagatcaatttggaatggaggaagtaataagcattatcataactcatatatgctactaacgcaatgctttgccctgttatgctagtgctgtcagtttgtcaaactatcattgactcttctctcttatctattataccccatgatggcatcattaatatgggtaccttgttgttgattcctcccttgcattcgctgcttgcacatagagatattcaataagaataagcaatcaaatcggggcaacaattttggtacgactttagctagattttggaaggtagctggatttttatgaacaaaaagattatgatgcatttgttggattatcgaatttttgtaggatcttgacatctatgtttctatcaaaaaagctgtatctgtggttgtgctgttctttgctcttcagtactgattatattatagcagaatatactttcttactatctgctttattatatagtccttggcatgtgtgaataagaatttttgtagaagcatggtatgcaactatataacttttgcctattttttgcagattgctcatcagaacagcttggctgtcgatgtcgatcttgctctagtctatgcttctcactactgcaaatttgaaacgatggcatgcttggtggatgaagggcatgccacatctttcctttgtcccttagtaaaagcttctgagcgtggttgcttgcaggttgtccagtggtttgtcaaccggcatgtttcagacattgagatgtgccttgctgtaacaaccgctgcctcttgcggccacttcgcagttgccacctacctgcttgcgcatatcccccggcatgtcctcgaagccctcagcccacagattctcaaagctgcgaggggacagggtagtgggtcttttgaaggtgtttccttccttctccgttcaaacttcctcaacgatgccgccgctacgtatgcagttgcagacagcattgcgaccacgagtacgatggatattccccaagacctggttgattttctgaaagagcagtggtctcaggccgcatttgctgaaggagtagaggctggggaagatcattttgtgaacatcaccagggttctgaggagaggggcgtctccgatccgcctgcatgacctcccggagcccatggcactcgctatcgcgtacctgccgctgtaccgggcatgcgcgagtgcaagagggcagctgctgccgcagagactgaggggggaactggtcgaggcggttggccggctcggcgttccggtcaacatggaaaacaacaggagagatttcctggcggttttggagcattacttcccatcattcataactggagcttgagaaacctcatggaattttacccagaacccaaatggtttagctgttgacacagtagaatggagccaaatgagccttcactgtgttagttcactatgtcagagagaggagtttgttgtcgagattgtatagagcattttgcggttgcgatgtgagaagacataaatgcttggaaactttttttttttgttttttttttgttgctgtcataggtcagcgttggcactacaactgcaccataaaatgtgatggtatgtttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0562400, RefSeq:Os02g0562400