Os02g0565500

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Revision as of 02:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0565500| Description = Similar to Pto kinase interactor 1| Version = NM_001053702.1 GI:115446774 GeneID:4329704| Length = 2897 bp| Definit...")
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Gene Name

Os02g0565500

Description

Similar to Pto kinase interactor 1

Version

NM_001053702.1 GI:115446774 GeneID:4329704

Length

2897 bp

Definition

Oryza sativa Japonica Group Os02g0565500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22332594..22335490

Sequence Coding Region

22333084..22333215,22333298..22333384,22333493..22333625,22333735..22334008,22334297..22334423
,22334516..22334769,22334890..22334974

Expression

GEO Profiles:Os02g0565500

Genome Context

<gbrowseImage1> name=NC_008395:22332594..22335490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22332594..22335490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttgctgcggaggcgccgaggaggacagctacggcccgccggcgaaccaggccgctccgccgcccaacgtcaatgctcccgggaatagaggcgggccgagagggccgggggcggcgcggccgggcgggccgccgaagccggtgaacatcgacgtgccggcgataccgttcgaggagctgaagaagatcaccagcaacttcagcgaccgcgccctcatcggcgagggctcctacggccgcgtctacaacggcacgctcagcgacggccgcgccgccgtcatcaagaagctcgaccccggcgcctcccaggagaccgactccgagttctccgcccagatagcgatggtgtccaagctcaagaacgagtacttcctggagctcttgggctactgcttggaagacggcaaccgcatgctggcctaccagtttgcaaccatgggttctttacacaacattcttcacggtaagaagggagtccagggcgcggagcccggcccggttctgaactgggcgcaacgggtcaagatagcttatggggcggcgagagggctggagtacctccatgagaaagtgcagccatcgatcgttcatcgagatgttcggtctagcaatgttcttatattcgacgagttcagctcgaagatcgccgatttcaacctgacgaaccagggcaccgacaccgctgcccggttgcattcgactagggtgctaggaacatttggataccatgctccagaatatgccatgacagggcaaataaatcagaagagcgatgtttacagctttggcgtgattctattggagctactaaccggaaggaaaccagttgatcacaccatgccaaaagggcaacaaagtcttgtcacttgggctactccaagattgagcgaagataaagttaagcagtgcgtcgatccaaagctcaacaatgattaccctccgaaggctgtcgcaaagctagcagcagttgcagcattgtgcgttcagtacgaagccgacttccgaccgaacatgacgatcgtcgtgaaggcaatccagcctcttctgaatacaaaaccagctgggcctgcagagccaccacctgcctga</cdnaseq>

Protein Sequence

<aaseq>MSCCGGAEEDSYGPPANQAAPPPNVNAPGNRGGPRGPGAARPGG PPKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGA SQETDSEFSAQIAMVSKLKNEYFLELLGYCLEDGNRMLAYQFATMGSLHNILHGKKGV QGAEPGPVLNWAQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLIFDEFSSKIAD FNLTNQGTDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVILLELLTGRKP VDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAVAKLAAVAALCVQYEAD FRPNMTIVVKAIQPLLNTKPAGPAEPPPA</aaseq>

Gene Sequence

<dnaseqindica>2276..2407#2107..2193#1866..1998#1483..1756#1068..1194#722..975#517..601#gtggctcctttggcgcggaaagagggggagctcccgccattccccaccattaacctcttctcccggggaacaaaacaccgctgttcttccctttgccccccctcgatcgatcgccatcgatcgatctcgtgcgggaagcgatcgatctcgtgcgggaatctttgggggaggtaagaatttctaccgttttctgcatgccgatccagatcgcatatggagcatgcatgcatcctctgttttcttgatccacgatcccctcattgcttccgatgattgcttgatcatctggaaattgtgcgttgattttaatttcttttcagttaattttctgttcctcggaaagagattgatccgtttcgtgaattgattcttcagggatttaatctgttggtgtgcacgcgaggaattaatcgaaaatggtttgcaggtcgtgcgcgatgatccgctgagcggggggcggccaccagatcagcccgcgcatccaactccggcgagaggaggaggaggaagaagaagatgtcttgctgcggaggcgccgaggaggacagctacggcccgccggcgaaccaggccgctccgccgcccaacgtcaatgctcccggtgcgtctccacattcctcttctccggcggcggcggcctcctacattcctctcctcctttgctgaccgatttcgtgaccgtctcttggtcttcttctccggcgacggcggatggaagcagggaatagaggcgggccgagagggccgggggcggcgcggccgggcgggccgccgaagccggtgaacatcgacgtgccggcgataccgttcgaggagctgaagaagatcaccagcaacttcagcgaccgcgccctcatcggcgagggctcctacggccgcgtctacaacggcacgctcagcgacggccgcgccgccgtcatcaagaagctcgaccccggcgcctcccaggagaccgactccgagttctccgcccaggtgtgccccaaaacaccccacttcttcttcttcctcctcctcgcgacatgagccatcttagctttttgctcatcttcatctcgtcgccatagatagcgatggtgtccaagctcaagaacgagtacttcctggagctcttgggctactgcttggaagacggcaaccgcatgctggcctaccagtttgcaaccatgggttctttacacaacattcttcacggtaataagtcttttccatttcactactaccttatgtttttcttacataatggaatagaaaaccatcccagtcattactcaacgaactacagccgattattacaccaaatcactcgaagcaagtgtacttcaaagtaaacttaaaaaaacactcccaaatttaaagcaaacacgagataaagagcaacagtaaaatcccgacaagtttacgcccatgtgatcagggggcggagccaaaaaatctccacacgtagggctaagctaattaatggttttggatgtgatgcaggtaagaagggagtccagggcgcggagcccggcccggttctgaactgggcgcaacgggtcaagatagcttatggggcggcgagagggctggagtacctccatgagaaagtgcagccatcgatcgttcatcgagatgttcggtctagcaatgttcttatattcgacgagttcagctcgaagatcgccgatttcaacctgacgaaccagggcaccgacaccgctgcccggttgcattcgactagggtgctaggaacatttggataccatgctccagagtaagggagagaatgattgatttctcgcgtatcagactgtacagcatgctttgccttttgcaggatttacttgctgacgatttgttggtctgattatggtgatgttcagatatgccatgacagggcaaataaatcagaagagcgatgtttacagctttggcgtgattctattggagctactaaccggaaggaaaccagttgatcacaccatgccaaaagggcaacaaagtcttgtcacttgggtaaggagaagttttatccttcaacaaaagataacttattacaatatatcctatttcaatctttccatttccaatgatcttacatataccatgatctttgtgaggcaggctactccaagattgagcgaagataaagttaagcagtgcgtcgatccaaagctcaacaatgattaccctccgaaggctgtcgcaaaggtagctatactgtagcaaatctgacaaaattcagaaagcagcagtgagtgccattgttttttctttcatgattttttttcagctagcagcagttgcagcattgtgcgttcagtacgaagccgacttccgaccgaacatgacgatcgtcgtgaaggcaatccagcctcttctgaatacaaaaccagctgggcctgcagagccaccacctgcctgatcagattgtatgggagttctgctctaggcagacaggggaaaaaaaaccacacaaactttgcatggtttcctgtgttttcacatcaggcagtgtatgttttaagaagccatgcaacttggaggagcaccaattcggcatgattttttgtaaaacactgatccattggtaccacagggtatattacatatagagggggtattttgctaactggtgtaatgaattaagttattctttgtcgtgtcatggtgtaattttaaggtccttcaaaagcttgcatagaaccaaggattgcatgatgcattcccaagaacttccatggctgcctctttttcttatatttgtatagaactttggaattaatagtagtttttcttcttctttttttctgttggaactacaaagctggggctaaaatcctgttcctgaattcaggttttggccaggatggagattaaatggtgcacattgcatagatgtacacctaagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0565500, RefSeq:Os02g0565500