Os02g0580400

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Revision as of 02:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0580400| Description = Dynein light chain, type 1 family protein| Version = NM_001053770.1 GI:115446910 GeneID:4329776| Length = 3963 bp| ...")
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Gene Name

Os02g0580400

Description

Dynein light chain, type 1 family protein

Version

NM_001053770.1 GI:115446910 GeneID:4329776

Length

3963 bp

Definition

Oryza sativa Japonica Group Os02g0580400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23197399..23201361

Sequence Coding Region

23197746..23197907,23200759..23201196

Expression

GEO Profiles:Os02g0580400

Genome Context

<gbrowseImage1> name=NC_008395:23197399..23201361 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23197399..23201361 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccggcgtccgaggagctcgagcagcgcagccgctacctcagctcgctcatccgccgcaccaagctccacgccgcgccggcgctcgccccgcccccgcccacgcctcccccggagcccgagacgaagctgcagctggagatggagccgcagccggagcgagtcgaggaggccgccaagaagccggcggcggtggccgccgtggtggagaagagggaggtcaagggagggggtggcggtggcggccaagctgggaaggggaaggggaaggagaaggagatggagaaggggaaggaggagaggaaggtgtcggtccgggtgcgcgcggccgacatgccgctggcgatgcagcggcgcgcggtccgcctcgccttcgacgccgtcgccgccatgccgcggctcgacagcaagcgcctcgccctcgccctcaagaaggaattcgacgcaacatatggtcctgcttggcactgcattgttggtacaggctttggttcctatgtcacccactctgtgggaggcttcttgtacttctccgtcgacaaggtctacgttcttctcttcagaaccgctgtcgagccattaggccatccacaatga</cdnaseq>

Protein Sequence

<aaseq>MDPASEELEQRSRYLSSLIRRTKLHAAPALAPPPPTPPPEPETK LQLEMEPQPERVEEAAKKPAAVAAVVEKREVKGGGGGGGQAGKGKGKEKEMEKGKEER KVSVRVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIV GTGFGSYVTHSVGGFLYFSVDKVYVLLFRTAVEPLGHPQ</aaseq>

Gene Sequence

<dnaseqindica>3455..3616#166..603#ggccacttccatttccattccccccaccaccgcgcagcggcgcaggcagcgatggtgaccaacgctcgccgccgccgccgcctcaggtgagcacgacgccccgcgcgcgtccccgcaccctggaaggaagagcagcagaagacgactccgacgcccacgcccgccatggatccggcgtccgaggagctcgagcagcgcagccgctacctcagctcgctcatccgccgcaccaagctccacgccgcgccggcgctcgccccgcccccgcccacgcctcccccggagcccgagacgaagctgcagctggagatggagccgcagccggagcgagtcgaggaggccgccaagaagccggcggcggtggccgccgtggtggagaagagggaggtcaagggagggggtggcggtggcggccaagctgggaaggggaaggggaaggagaaggagatggagaaggggaaggaggagaggaaggtgtcggtccgggtgcgcgcggccgacatgccgctggcgatgcagcggcgcgcggtccgcctcgccttcgacgccgtcgccgccatgccgcggctcgacagcaagcgcctcgccctcgccctcaagaaggtaaaaccatccgtctcgccattggctacagtttgttcaagctattcgagtacacgtagacagtggcacagtgcagtattggggtggtaaatttgtactccctccgtttcaaaatgtttgacgccgttgactttctagcacatgttagactttctagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcatatcatttgattcattgttaaatatatttttatgtagacatataattttacatatttcacaaaagtttttgaataagacaaacgaccaaacatgtgctaaaaagtcaacggtgtcaaacatttcgaaacggagggagtagtaaagaatatggttgggggattgagaaatttgggcaagaaatatgggccaattccctacgtgcccatgtaatttcacccaatcccttctacgtccctgagatttgtttgatctcttatatgcccctgagtttttatttggatcccttacatacccattccgtagttgaccattagtttgaccgttagttattgtagaaattactttgttgtccttggtatattgttaaaagctagaaatgttttatgtgtaaattatttgagttgtgaaaaccaataaggaaaattactaaatatttgttatgaatttttaaaaataaaaaattatttcattaaaataaaaaagatttattgtaaaaaaagttctgcataaaatttcaaaattacttttcaacaaatatttagtgaaaaaagatttgttgcgaaaaaacaaaggggatgtaattagtttatcacaaattagaaaacaaatttaaaatttaaacctaaataacatttagtttttgctcttaattttctggtgaaactaatgtatggatttaatcataagttttaaaaaataaaaaataataagttttattttttaagttgggcattaaatgattatattgcttgtattttgtataagttaattttttcatatgaaaatttattaggtaggtaccattgtataggatgggtaatatagttattttaaaatatttaacggtcaactaatgatcaactaacggagatgggtatagaggagatcaaaatgaaaactcaggggtatataagggatgatgtcaaattcaggggtattgaagggattgagtaaattttcaggggtatattgggaattttctcaagaaatatatagcctcacaactcaagcaaggaggtggctagtgatgggaaccttaaaaacaggaaaatgggaaaaggaaaacgatgtctttgaggctagtttagcaaaaatagatagacaggtgcaatgccagcatctctattataaataactggaagggatatcttgaagaaagtgactatggttgaaaattttctgtttctgttagagatgtgttatcatttggtcccaacattggataggggaaaagctactttagaatcatataccagaaatgcaattgtgacagcttagcctaacacatgtgacatccagcatttgttagctgtgacccgtgaagctcagaagctggcttttgttttacccctgtgttgtaagattcattcttcgccattcccctaacagaatttcccattcatatatgttgttgttcacaccatctgatccttttgctttgtctgattttatattttagccggagtagctcattacctgagcattaaaatgtggaacagatcttctagaaatttgttgattacaagaatctgagagcaatctagacttctgtgtgctcaatggtagattaactaaatgcatcctctaaagaggtacgcaaattggttgcttaaaaaatggatgcatgccatctaggtacacaatattttgctttgtagttagatggttttcattcaaggtttcaattttgtgaatgagtgctatttgttagcattggtcgtcaacatatggctaaaacaatgtaataatggatggtaaagtgcattccttgtgtagaagcctgaataaaaaaaatactttgtctagaagaagtaacagtattttgcttttacttatgactactttgacagttcgacttagaggtctgcctatccttcttaataacctcaacgtgctaacttatcaacatcttaactcttacctgtggatgtggtgcaaaagaatatttctgtgtttacttcgtcatattctgcagtcttttttctgagaatacacaaatgatttgcgcatcattgtattaagaagaagagttacttacaaaattgcagccctatctgaagtcagaagaccgcttgacccaacaagattttctgcagtcttacaccttttgtaggaatgatacttttatagcaaacctcctatgttaaataaatactcatgcccaaaggcacctgctacttgaaataattttttcatcaggcatttatgtatcacatgaaaaaaaaaactatatgaaatttagatatccctgaaaggcagatgaaaattagggcacatttttttagtcctaattgccaatcatatttcccagcaccttccatcgaattctgttgttcagcttgttcaaggttcacacaaaaaagttcagagtgcatgtctgtaagctctgattctcagtgctcctaaactggctatgtacaagtggttctcatatggatggttggttactacagaatgctaatgctcagaatatcggttgcacttgcacggttgcaccttaggttaaagtttgtagcaacttccctactgtattattatttttccttttgaacactacgttttacattatttttcactgagccaactaggatgaaatgtcttagccattgttaatgtggtttttcattttcttgcaggaattcgacgcaacatatggtcctgcttggcactgcattgttggtacaggctttggttcctatgtcacccactctgtgggaggcttcttgtacttctccgtcgacaaggtctacgttcttctcttcagaaccgctgtcgagccattaggccatccacaatgagatcaaaaatcgattcattacaaggtaaaaaattgctgtgtattatatgtatctgacgtccaagagccgtagaatgttaaggtgagtagaacaatcgtggctctccatggaaattaatctgcagccgatgtaaacatttggcatccaatccatgaactctggaagcttttagttgagtcacttctccagcatgaagaaaactagcttttgcttccgaccgtgccttgtatgttgtatctggttcttattgatcagagctagaaaacctgagctgcgagttgtggtacctgaaaaatcagggaaatatagcgagtctgatgatgcttcccatttggacttcttggctg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0580400, RefSeq:Os02g0580400