Os02g0581300

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Revision as of 02:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0581300| Description = TRAM, LAG1 and CLN8 homology domain containing protein| Version = NM_001053779.1 GI:115446928 GeneID:4329785| Length...")
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Gene Name

Os02g0581300

Description

TRAM, LAG1 and CLN8 homology domain containing protein

Version

NM_001053779.1 GI:115446928 GeneID:4329785

Length

4576 bp

Definition

Oryza sativa Japonica Group Os02g0581300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23265591..23270166

Sequence Coding Region

23266027..23266058,23266251..23266432,23267222..23267407,23267593..23267748,23267834..23268057
,23269858..23270007

Expression

GEO Profiles:Os02g0581300

Genome Context

<gbrowseImage1> name=NC_008395:23265591..23270166 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23265591..23270166 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtcgcggcggcggcgggccggctcctggcggcggtggactgggagcgggaggcctacccggcgtaccgcgacttcttcgcgctccccttgttcgccgtcttcttcctcgtcgtccgctacctcctcgactgcttcgtcttcgagtggattggaagaaaacttatatttggaaaggaaaaggttgattatgagaaggaggaaacaagaaagaagataagaaaatttaaggaatcagcttggaaatgtgtctatttcctatctggagagattttatctttgtcagttacatataatgagccttggttcacaaacactaaatatttctgggttggacctggtgaccaggtttggcctgaccaaaagataaaatggaaacttaaggctgtctatatgtatgctgctggattctacacatattccatatttgcacttatgttttgggaaacaaggcgttcagattttggcgtgtcaatgtcacatcatgttgcaactgttgcgctgatagttttatcttatgtgttcaggtttgctagagttggctcagtagtattggcaattcatgatgcaagtgatgtgttcctggaagtagggaaaatggccaaatatagccattgtgatttgcttgccaatgttgcatttcttcttttcgtcgtttcatgggttcttctccgtctcacatattttccgttctggattctcagaagtacaagctatgaagtcttgttgaccttggacaagaagaagcacaattttgatggtcctatatattactatgtgttcaattctctcctattttcactacttgttcttcacatatattggtgggttctgatatatcggatgcttgtgagacaaatcaagacaagaaatgttggagatgatgttcgatctgactctgaaggtgaagacgagcatgaagattga</cdnaseq>

Protein Sequence

<aaseq>MGVAAAAGRLLAAVDWEREAYPAYRDFFALPLFAVFFLVVRYLL DCFVFEWIGRKLIFGKEKVDYEKEETRKKIRKFKESAWKCVYFLSGEILSLSVTYNEP WFTNTKYFWVGPGDQVWPDQKIKWKLKAVYMYAAGFYTYSIFALMFWETRRSDFGVSM SHHVATVALIVLSYVFRFARVGSVVLAIHDASDVFLEVGKMAKYSHCDLLANVAFLLF VVSWVLLRLTYFPFWILRSTSYEVLLTLDKKKHNFDGPIYYYVFNSLLFSLLVLHIYW WVLIYRMLVRQIKTRNVGDDVRSDSEGEDEHED</aaseq>

Gene Sequence

<dnaseqindica>4109..4140#3735..3916#2760..2945#2419..2574#2110..2333#160..309#gaagaggaacagaggagggaagtccaatcggaatccaccccggccccaaccggggtcgcctcccctcccctctcgatccttcttcatccagcttcgcggccggcgcggcggaggagagatcgatttcttgctcctactcgattcggcctccggcggcggatgggggtcgcggcggcggcgggccggctcctggcggcggtggactgggagcgggaggcctacccggcgtaccgcgacttcttcgcgctccccttgttcgccgtcttcttcctcgtcgtccgctacctcctcgactgcttcgtcttcgaggtgaatctgttactgttgacctgttgggtgcggaaagcagcgaagcttttgttttgctggtgtgtgtgtgttttcccttcttcttctccgggctggatttcgcgttggaggaatcaccaaccaatccgatcgcgttggatagctagctagctgggtttagtttatgtgtgtggggggaaacaaaggcgctgctagctttttagcgttttaatgattgcttgtcgggctagcttggcatgcgtttcgcgtttcctggaattgtggggggagagatcaaacgctcggattctcaggagagatgtgctggtacatcatggcattgctgtattggagagtcgtcctcttctcttgtctaatgattatctggtactctgaatctgattttttgttacggaggggcccctgttgtgttgcgctgcagtggttagtcagggagtataatggtttaagatttaaggtttgttctttggtgatgaatagtgtgatctctgaggcataggcgcatcaactataacaataatggtatacagtttcaacatcttaaacaataagaatttagtgatttagctatcaagatccatatatgattccctgggttagtttgtcttccattaagaaaatacatatataatgtatttttcgaggcgaacaatgacggacttactgggccagcctgaacacaagtttattaaggtaaaagttcatgcaaggagaagggttttgcgagcagagaaatggattgcaagttgagttgatatctctcataacctatcacacgactatacaatttactgtttatcagtggcataaggcagcgatgtgctgcgaatttgaggttgtcagcagctcagtgcagcaacagaccacgagtagatctgagtggtttctggcataaagagagcagtatttctctcgtgtgagcatcttgagcaaggttaatgtaatttatatccctcaaaaactagaaatacctcgcggttataaatttgcaaattgcaaccatctcattgcagtaagaatagttgcaaccgccacatttattgtatgagtagtatacctttccactgggctatctgtaaccaggaaaacatttgtgtcgtgatgttttcttgagattttttttagataatcttgatatgtatgttgaggtatatgttagcatgctattcatctttatgttacataccattatgttatttaaaaggtaattctgatcattacaagtcatcaggacggagaactaagacactagtgagggagagttctttcacttctaatatggatggacttaagcacaagcacacaatgatgccttctttatgaacatttactaactcaaagtctaggttggagtgcgatacctaagttgattacatatagcttttttcacaagaaaattatttagacagatgcatgactacaatatacagacatcacagggtactgcaattatggcacatggccatctggttaccatttgttctgtatttgtttgagacattttttttgtttgctagatgagatcatttgcttcactatgagggttattatgattctaaagtaatttatgcttcttaaatacatgattggtgaaaggttgagcacaacagctactttaattctgtattccgaacccaccagaaaattactcttgttcctgtatagttctaatagattctctcaggctccacgttgtatcatagatatttttactttaaataattaacattttcaattgttaatgtaattctaaagcttaatgttgacactttcattgtttttcttttattttcgtttcagtggattggaagaaaacttatatttggaaaggaaaaggttgattatgagaaggaggaaacaagaaagaagataagaaaatttaaggaatcagcttggaaatgtgtctatttcctatctggagagattttatctttgtcagttacatataatgagccttggttcacaaacactaaatatttctgggttggacctggtgaccaggtttggcctgaccaaaagataaagtaatacgaattggtcctttattgcttcatgttcttactagttctcaggctggtgtatatctaacaattttccccttatctacagatggaaacttaaggctgtctatatgtatgctgctggattctacacatattccatatttgcacttatgttttgggaaacaaggcgttcagattttggcgtgtcaatgtcacatcatgttgcaactgttgcgctgatagttttatcttatgtgttcaggtctctttttgtctaacttttaatttttgttgtttcttgaatatgaactttttttaccttgattcaagcattactctatgagttagtagcacagggccttaatattttatcttcactgagtttatttcactcatttttattaacacttaactaatttatttctgaaatttttcttcatgaaccaggtttgctagagttggctcagtagtattggcaattcatgatgcaagtgatgtgttcctggaagtagggaaaatggccaaatatagccattgtgatttgcttgccaatgttgcatttcttcttttcgtcgtttcatgggttcttctccgtctcacatattttccgttctggattctcagaagtacaaggtaaatgtgatgtactgaccttgttgagatatgcctagaaaagtcagccagaattttgtgagaaagaagtttttttgaaaactagcctagaacccgtgcattgcaatggaaaacaaattgagtttttagcttattaaatcaatcaataagcacttatttgttctaagtaatactatgatttttcttattgaacaagtgattttgaaatttaggggagccaatagtgaaatgggggatgacttgttgaaaggtggtgtaatagttgtggggttcagatgttagtggtaggggtggtgtggggatggacaccaccacttctaacattttaagtactatagatgttgtgaattgtcaaaagcaagcatattatttactatgcgaaatttgtaccatatgaactttggatggtgaattctgctgttcttgccaatgccttcattttaaggggagaaaagaaacccaagccaacaagtaattcagttagaaaacagtaattgtatccagtaggaaaaagacctttgaacatagcacagtatcttatgcctcttgaaaacaaacttatctagatcatgccaccgcatgctgaaattaattttggattttatttccgatcctttctatgccatgataatcatacttatattgtacaaaatatatgtgtgatagcagactagaatactatgtacaatagtatcttgctgtcccattgtcccagcatgtaacaaaatggtgttttcattccttatttattagaagttacatgagctgactaagtcccgattgcttcagctatgaagtcttgttgaccttggacaagaagaagcacaattttgatggtcctatatattactatgtgttcaattctctcctattttcactacttgttcttcacatatattggtgggttctgatatatcggatgcttgtgagacaaatcaagacaagaaatgttggagatgatgttcgatctggtaagctctgcccccttagaatcttgtttttgcacaggatgagcatgcaaaattgcatggtcttattttcagtcccatctgcattgggacaagacaaagtctgcttataacatgcattactccaaccaccattgtgagttgaaaattattttgagtttgctaccatctaaaactgttctgctttatgtgcagactctgaaggtgaagacgagcatgaagattgattgctgaaccatctggtttctatcttctcatgatgctaggaacgccaatatctcagcttatgatgaattcttttcctggatgagggaacatgtgcagattgtttggatatgagtattattgttcatgcgaattcgctacagagccgagcaatcatttcctctgtcccggtaggatatttgtgtgttgatgcattgtatgcacgagaggtcgcactccgaaccttccctctggctgatcatcacagaagatattctttgacttctcagttcttgtagagattgaaatgtaccgaaaggtgtaccagtagcgaaaatgtagtatataattccagaaatgcagtctacatatactaaaaccctttcttggtcatttgtgtaagatacgtataccatatgaccattatatgaaattgtgtactattactatcgttctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0581300, RefSeq:Os02g0581300