Os02g0586800

From RiceWiki
Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0586800| Description = Tetratricopeptide region domain containing protein| Version = NM_001053804.1 GI:115446978 GeneID:4329811| Length = 2...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0586800

Description

Tetratricopeptide region domain containing protein

Version

NM_001053804.1 GI:115446978 GeneID:4329811

Length

2506 bp

Definition

Oryza sativa Japonica Group Os02g0586800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23475364..23477869

Sequence Coding Region

23475493..23475598,23475714..23475871,23476402..23476567,23476668..23476985,23477374..23477585

Expression

GEO Profiles:Os02g0586800

Genome Context

<gbrowseImage1> name=NC_008395:23475364..23477869 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23475364..23477869 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgcgcgcgcggcggcgctctcctgccgcggagtctccccgcacccccgcgcccactccctcctccctggccgccgccgccgccccgtcctccccttcgccgatgaggcggcggcggcgcccctacgtgtcagctccgtgccccattctcgggcttacggctgcggcggcggcggttacttcgtgcatctcgaagaccgcgatgacggagaggcgtctcggttgctgcgtgcccttcggcgagtccttcccgatcaccagaaatgggcacaacctgaccttctgaaagctgctgttatttcaaccatgtcaatacttgctgtgcctcttgaggcatcggcatcggcggagacatgtcagccagctaattctatggccaatatgcccatttttattgctgtggctctaataggtgctgctgttggtggattactagcacggcaaagaaaggaggaattaaagcgactgaacactcaacttcgccaaattaacacggcacttagaagacaggcgcagattgagtcatttgctcctggccttacttacgcgccagttggcagagcaacagaaactgaagttattgtagatcccaggaagcaacaactgacagtaaatttgagaaacgggaagacatttatgaggaatcaagatcttgatatggcagtaaaggaattcagggcagctctggagctcgcaaagagcgtaggagatcgctttgaggagaagaaagctgctcgtggattaggtgcatcgctacaaagattgggcaaatacagagaagcaatgaactgctactataaagtcctggagctttccaaggaaacgggcgaggattccgggtgcaccgaggcctacggcgccatagctgactgctacacggagcttggggatctagagcgagcggcgaagttgtatgacaagtacatatcaaggttgcagcccggcggtggtgagtaa</cdnaseq>

Protein Sequence

<aaseq>MPARAAALSCRGVSPHPRAHSLLPGRRRRPVLPFADEAAAAPLR VSSVPHSRAYGCGGGGYFVHLEDRDDGEASRLLRALRRVLPDHQKWAQPDLLKAAVIS TMSILAVPLEASASAETCQPANSMANMPIFIAVALIGAAVGGLLARQRKEELKRLNTQ LRQINTALRRQAQIESFAPGLTYAPVGRATETEVIVDPRKQQLTVNLRNGKTFMRNQD LDMAVKEFRAALELAKSVGDRFEEKKAARGLGASLQRLGKYREAMNCYYKVLELSKET GEDSGCTEAYGAIADCYTELGDLERAAKLYDKYISRLQPGGGE</aaseq>

Gene Sequence

<dnaseqindica>130..235#351..508#1039..1204#1305..1622#2011..2222#cacttccattccacgcacgcgcacttcacgtgacgagaccatcgccacccccctccgccatccttcccaccgccgccgccaacgccgacgccgcccgacgaccgagccaacgcgaccagccagccgcccatgcctgcgcgcgcggcggcgctctcctgccgcggagtctccccgcacccccgcgcccactccctcctccctggccgccgccgccgccccgtcctccccttcgccggtaagcctcatcctcgaggttcctctcttctcactcgcgccccgcctgccgcaaggctagccctagcgctctgtgaggattgattcgtcataccgtatcgtcgtggggggaacagatgaggcggcggcggcgcccctacgtgtcagctccgtgccccattctcgggcttacggctgcggcggcggcggttacttcgtgcatctcgaagaccgcgatgacggagaggcgtctcggttgctgcgtgcccttcggcgagtccttcccgatcaccaggtaaggccatttaggcttcgattttggattgctgcgaaaacaagccagactgggtcaacaatccaatccaaccgtggaatcggtttgagatttagcatgacgcgtgaattgagcctttcatttgtgaggtgacatgacatgataattgacaaccccgttgatgccgtacacgcagtgagataaagcctgtaattggaaggcatttgtaacctgattgttgctcggcggattacattatccttttgccacataaaggcctgataatagtttgtagattgtgattagagcaggataaatattacttttcgtgtgtacgactttaggtccgataagcttattacaatgttatctttgggggcgggttaccacttaccagtgaccaaaaactttgtgggagatcaatcatattattgttttgttcataatgtatatccttcacatatgagaatgcttctttctttccccttctactacgttctgcaactttttgctctttatttttgacctgtttgtgaaaattgttgctgcagaaatgggcacaacctgaccttctgaaagctgctgttatttcaaccatgtcaatacttgctgtgcctcttgaggcatcggcatcggcggagacatgtcagccagctaattctatggccaatatgcccatttttattgctgtggctctaataggtgctgctgttggtggtaagatatgcaaacctgtgtacttgcaagctcaactggatttatataattttgatgaagcgaaccacattttattttgctttccctatgtgatttgcaggattactagcacggcaaagaaaggaggaattaaagcgactgaacactcaacttcgccaaattaacacggcacttagaagacaggcgcagattgagtcatttgctcctggccttacttacgcgccagttggcagagcaacagaaactgaagttattgtagatcccaggaagcaacaactgacagtaaatttgagaaacgggaagacatttatgaggaatcaagatcttgatatggcagtaaaggaattcagggcagctctggagctcgcaaagagcgtaggagatcgctttgaggagaagaaagctgctcgtggattaggttcgtttctttctaataataaccatcatatagttatttcttcactgtcataatagaaagtacataatgtgatgttttaccgtactgttcgaaaaattagctacaaacaagaaagacaggtaggctctgggtcttatagttaggctatataatcactaaaaagtgtttatcgaattgaattgtgttattggtgtcgtatcaaccattaagcaccaagcctttggtttatggtgctactttccacttctgtgaaactcaattatagcgaacacagttcaaaaggttcatcgagtttcaagcttaagaagcaatcactgtcagatagaaagcaattatattatttgagttttcaactgtgatttgagtttttccttttgttttgcattaggtgcatcgctacaaagattgggcaaatacagagaagcaatgaactgctactataaagtcctggagctttccaaggaaacgggcgaggattccgggtgcaccgaggcctacggcgccatagctgactgctacacggagcttggggatctagagcgagcggcgaagttgtatgacaagtacatatcaaggttgcagcccggcggtggtgagtaaacgcttgggctttcctgacccaaacgatttggtttcttcctgttgcatggttgatgttcagcaaaacagtcaatttgttggcctcattttagctttgtgggagcgcttgaatcgctcaaggaaaaaaagctcaactcttgtatataaatgtcagtggtgcgtgctacttgagataacaatggcaaagcttggtctggtttgctgcctgttgcaagcggcaagcactgcgtacacacacggtgcacgcatctactgatcttcctaaaataactctgccaaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0586800, RefSeq:Os02g0586800