Os02g0595500

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Revision as of 02:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0595500| Description = Similar to NAD-dependent isocitrate dehydrogenase precursor (EC 1.1.1.41)| Version = NM_001053849.1 GI:115447068 Gene...")
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Gene Name

Os02g0595500

Description

Similar to NAD-dependent isocitrate dehydrogenase precursor (EC 1.1.1.41)

Version

NM_001053849.1 GI:115447068 GeneID:4329858

Length

3301 bp

Definition

Oryza sativa Japonica Group Os02g0595500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23964872..23968172

Sequence Coding Region

23965180..23965454,23965746..23965824,23966167..23966406,23967600..23968142

Expression

GEO Profiles:Os02g0595500

Genome Context

<gbrowseImage1> name=NC_008395:23964872..23968172 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23964872..23968172 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggcgatccgcccctctcctccagcgcctcctctcccccactccctccccctccccctccccgccccatcctctcgccgccgccgccgtctcccgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctcatcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggccatgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccccccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccaccccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctacgcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgacattgtcgtcatcagggagaacaccgagggcgagtactccgggcttgagcacgaggtcgtccctggcgtcgtggagagccttaaggtgatcacaaagttctgctctgaaaggattgccaagtatgcttttgagtacgcgtacctcaacaacagaaagaaagtgactgccgtgcataaagcaaacatcatgaagcttgctgatggtttattcttggagtcttgccgtgaggttgcaacaaagtatcctggaattcaatataatgaaatcatcgtggacaactgttgtatgcagcttgttgctaagcctgaacaatttgatgttatggtcacgccaaatctttatggcaatctggtggctaacacggctgcaggtattgctggaggcactggtgtcatgcctggaggtaatgtgggtcaggaccatgctgtcttcgagcaaggagcttctgcaggaaatgttggaaacgtcaaagttgtggagcagaagaaagctaaccccgttgctctgctcctctcatctgccatgatgttgcggcatttgcaattcccatcattcgctgaccggctggagacggcggtgaagcgtgtcatcgcagaaggcaagtacagaaccaaagacttgggcggcagcagcaccacgcaggaagtcacggatgcagtgatcgcgcatcttgattaa</cdnaseq>

Protein Sequence

<aaseq>MARRSAPLLQRLLSPTPSPSPSPPHPLAAAAVSRRTVTYMPRPG DGAPRAVTLIPGDGIGPLVTGAVRQVMEAMHAPVYFESYEVRGDMPTVPPEVIDSIRR NKVCLKGGLATPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIREN TEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKL ADGLFLESCREVATKYPGIQYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAA GIAGGTGVMPGGNVGQDHAVFEQGASAGNVGNVKVVEQKKANPVALLLSSAMMLRHLQ FPSFADRLETAVKRVIAEGKYRTKDLGGSSTTQEVTDAVIAHLD</aaseq>

Gene Sequence

<dnaseqindica>2719..2993#2349..2427#1767..2006#31..573#atccgcctccaaaccctagacgcggcggccatggcgcggcgatccgcccctctcctccagcgcctcctctcccccactccctccccctccccctccccgccccatcctctcgccgccgccgccgtctcccgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctcatcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggccatgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccccccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccaccccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctacgcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgacattgtcgtcatcagggagaacaccgagggcgagtactccgggcttgagcacgaggtcgtccctggcgtcgtggagagccttaaggtatggcgaattccgcttgctgctaactcacctagttgatgtagtgtttgccagggtgcttgggttaatgcgtgtgccgagagaaccccaaatgcaacttaggtttgccacttatcgagcaatttcgtctatatacttaggactgtttgttttacctactgcttgttactttactggattggtaggtttattgtccacatctagtaaccttagtattcagttgaattgatgaaacttaccatgtgtattgacgcttttctgagatgttagtggtttgcataatgagtattcgagatccatgtattgctgggttgtgcataaaacactttaggcatatgtaactggtaagttgtttgttgcaatgaagcatgcttgctgtagttgagatagtggttatgatcgaattatgtggactattcaatacagatttcgatggatgggcttcaaaatatcctcaaattaagtcagttttacaaaatttatgtaatcacctgtgtagaaattgataaatctctgagatgatccagaaggacttatgctaataagcaccaaatgaagcataaaaataatctgataacttgcggtatccaattatccatcctttgagaaagctataaaattattaggttaactatcattggtgtagttctgatttgaagaggaaacaagttccttttgggtcctgtgacaattttcttaggtgaatggatctcacagttgaagttttggttgctagctgcacattaggagcagtgctttgatttcaaacggctcttgatgttggttagatcctatattgttggaacagatgctatggtatgcgttagcattaacaattgacctgaatgtgtaaacagtttaatacttgatacatgttatattgacgcatgatgtatatctacatagtttatatctgatattgctaatctggtcactagtccatggtgatctgagtcaattagttatatttttaacacttttgcctccataaatggcctgttgatggcactctagctgattaggtcttggcaggcagtcctttactgcacatattcttttatactcctattttgcaaatttgcgtgagtaccgatttctgaaatagaacgtatgtaaatgtttttgtcacttttcatttcatcatctaaaggaatttttttctatatggtactgttactaaatggatttactaggtgatcacaaagttctgctctgaaaggattgccaagtatgcttttgagtacgcgtacctcaacaacagaaagaaagtgactgccgtgcataaagcaaacatcatgaagcttgctgatggtttattcttggagtcttgccgtgaggttgcaacaaagtatcctggaattcaatataatgaaatcatcgtggacaactgttgtatgcagcttgttgctaagcctgaacaatttgatgttatggtaagtatgttagttctatcattactatgcatcttaacaaatgcattctgtttgtaacgtcaccatattctatactcacctactgatctatgcttttatcatgtcataaaaacaaaaacaaagtaaagtttttagtttctgcttgatgtttacatatattgatcaaatgcacattatcagagtacttagtagattatctgcaatgaatgtgatagaatattaattccctttgcacttctgtctgaaggatgttttcttgattgtcacagagttttcagatcaagtttgtttgattaactaggaacttttgatttagcatgctcttgttttgtgtgtttgtaggtcacgccaaatctttatggcaatctggtggctaacacggctgcaggtattgctggaggcactggtgtcatgcctggaggtaaattttgaactatcgcttgtaattctgtacttttacctgcacaaatagtcaatacggctatcaggagctggaaaccgacaggcttgcttttgcagttgtctgttagttacaggctatgtgttgtgtgatattttgtgttgcattttatacactttcttggacccactcaattttgtatgctgccagaacctcttacaaatgtgttaactctcaacttgtgcatatttcatatttgtgcatatgcaaaaaacaaatacatacaatcctcatgaaatgcacaaattttaggtaatgtgggtcaggaccatgctgtcttcgagcaaggagcttctgcaggaaatgttggaaacgtcaaagttgtggagcagaagaaagctaaccccgttgctctgctcctctcatctgccatgatgttgcggcatttgcaattcccatcattcgctgaccggctggagacggcggtgaagcgtgtcatcgcagaaggcaagtacagaaccaaagacttgggcggcagcagcaccacgcaggaagtcacggatgcagtgatcgcgcatcttgattaattgctggccggctgcgttcttttgaaacaaaattttccctttggactaggtgtctagtcccgactgattttcgtttcttatagcgttagatcatcatttcgttcgtcacagccttgtacaatcttcaggtgtcttgtgtctggtggattttgcttcggaatgatggagcaaatcaccaggaatccaggatcgatttttaacgcaatgtttttgcggtcttaactggaaataagagagaacgattctcttaactgtaacactattgcgttgattacttctacttattattacatattctgatctttact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0595500, RefSeq:Os02g0595500