Os02g0596500

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Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0596500| Description = Snf7 family protein| Version = NM_001053857.1 GI:115447084 GeneID:4329866| Length = 3479 bp| Definition = Oryza sat...")
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Gene Name

Os02g0596500

Description

Snf7 family protein

Version

NM_001053857.1 GI:115447084 GeneID:4329866

Length

3479 bp

Definition

Oryza sativa Japonica Group Os02g0596500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24017726..24021204

Sequence Coding Region

24017891..24017916,24017997..24018165,24018304..24018387,24018963..24019115,24019266..24019418
,24020956..24021057

Expression

GEO Profiles:Os02g0596500

Genome Context

<gbrowseImage1> name=NC_008395:24017726..24021204 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24017726..24021204 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacatcttcgtgaagaagcccaaggtgacggacgtggacagggccatcctcaccctcaagacgcagcgccggaagctcgcgcagttccagcagcagcttgagaaggtgattgaagcagaaaaggaagctgcacggcagctagttcaacaaaagaagaaagacagagctttgattgcactgaagaagaagaaagcacaggaagagctgctgaaacaagttgacacatggcaaatgaatgtcgaacaacagctgtcagacattgaactagcaagtaaacagaaggctgtatttgacagcctaaaagctggaaatgctgctcttaagtctatccagaatgagataaatattgatgatgtccaaaagttgatggacgacacagctgaggccaaggcttaccaagatgagataaatgctgctctgggtgagcagctatctgctgaggatgaggaggctgttatggctgaatttgagaacttggaagcacagcttgccgttgagtctctaccagatgctccagttactgaagtacggcctgaggagaaatcagaaacacctgctgtcactgaggctgcagaagacattgacgaggttattgagcttcctgatgtacccactaaggcaccagagagaccagaagctgcagaaaaaacaaaagttttggaagaacccctacctgcatag</cdnaseq>

Protein Sequence

<aaseq>MGNIFVKKPKVTDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKE AARQLVQQKKKDRALIALKKKKAQEELLKQVDTWQMNVEQQLSDIELASKQKAVFDSL KAGNAALKSIQNEINIDDVQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFEN LEAQLAVESLPDAPVTEVRPEEKSETPAVTEAAEDIDEVIELPDVPTKAPERPEAAEK TKVLEEPLPA</aaseq>

Gene Sequence

<dnaseqindica>3289..3314#3040..3208#2818..2901#2090..2242#1787..1939#148..249#agcttacggttaccgtgcccgtctcctcctcgacctcgagagtccacctttccccctccccttccacctcccctctccggccatctccgccgccgccgcgtcggaaggaagaagagggcgccgggtaggtagcagcagcacgcggccatggggaacatcttcgtgaagaagcccaaggtgacggacgtggacagggccatcctcaccctcaagacgcagcgccggaagctcgcgcagttccagcagcaggtgcgcccccgtccccacccggctgatctcctcccctgctgctcctgttcgatcgcgcgtgttggggggtttcgggatcgtgccagatttggtctccgctgcggccgcccatcgcggcgggttgtgcgagaggtggttggggattaggtttcgggtgaattcgcctgtcgccttgttagttttttttttttctcgtggcctgattcatgaagctcttcaatctatcatggattgatgggatcgtagtagcagcgagagcaccaggtgacaatcagtagtagtaaacagtaactagtaagagatgatttgatgatttcattatgcgtctagtacttctggtaaatgccactacacgttcgggttattgcagaaaccaggcttgcttctagtgcacgccagagtgcattgcagctatctcgtcctcgcaaatttggccacaaaacgactttattttctgcattagcatgttattgtcttgttcatgaaggaaaaaaattctccgcggcagtgccgcacgccacagcctgtgcaacactgcgtagaataatgatgcgtgtccaatagcacgctgcagcctgagcccaactctggagccgagccgatgtctggtctcctacacccacacatctgtcaactcgttgaaaatgctaccaagccgcatctaccagctacatgtgaagcctgaatgatttcaattttcaatagagcttttttaagcaaccgttgatgataatatacatggagattttctagtgtaatatataagtcctttacctagactttatcaagatgcctcgggtgctcggaaattacattttgatgacatagcaaatcacggaacatttaaggagtagctccgataatctttaattgtactagtgttgagctatacaggaataccaaccacatgaaggcctgaaagtttgcaaaacacaaccaattctaacactatacccaaccacttaagtaaaaattacaatgtgttcattgacaacttaaaaacacaactggtgttgaaaccaggttggcaggttcacaacatcatatttgtacagcatgtaaaatcatttggtctatattgcagaaataaaaagagagccaaaacaccatctttacataggaaacccgaaaacttcaggactaatacaagctaattagctatatatcggccatatgcaggatgtactcctgtctcctggtcagcttgactccaatcagcggcagcaagagatgggctcagctcgacaccaaagagggcttggcctgtagcaggagatcaaacacgtgtcactattctgcgcggtgttgcactggctgtgtagtgtggcactgccgcagagaatatttttctgttcatgaaatagcttcaggttgcatctgctgtgtgtagtacaataggactatgcatgattattgactgcgctagtgcacatatgtcgcattaaatcagttcaattcttttgtaccaacaatcatggaggtcctaatgagttttgcttatgatggtttcttttttttttgttttgccctcttccagcttgagaaggtgattgaagcagaaaaggaagctgcacggcagctagttcaacaaaagaagaaagacagagctttgattgcactgaagaagaagaaagcacaggaagagctgctgaaacaagttgacacatggcaaatgaatgtcgaacaacaggttcgtagtctattggacatattctgtctccttatgaattcaaaataatttgactgggtaatatctgttacttacaatcggaattgataatcagtgaaacgttcagttaagatgcatgattgacatcctctttttgtttgcttgttgtagctgtcagacattgaactagcaagtaaacagaaggctgtatttgacagcctaaaagctggaaatgctgctcttaagtctatccagaatgagataaatattgatgatgtccaaaagttgatggacgacacagctgaggccaaggcttaccaagatgtaagttgaataaactctacactcttgcttgttactacatttacagttgttttatccccttagttgtctggaagtcatggtctcaaattgttttactgtatcctcagttacacctttggtatcacatcgggttcctataaaagctgttttgatcaacttatgccagactaaatagactctgtaggttttctgaaagattatagcagtcttggttctggaatggcggcattattgtttacacccatatgcttcttgaatgtatgagttgtctcctgattttgtataggatgtgctctatttgtgtgcctataattggatttaattggaaacagttgtgcatgagtgtaacattggtctatgtagttaacagcttaagaatgaatggatctgacctgcataacatttgtagatttgcgagtttgtgatcgacgtgtcagattacacaaacagcgctatcgtttttcttttctattgatggtctatgcacttgccttaccttctgttgtgttggtgctccaactacaattgcatggacctccttatattgtttacttatcgaccaatattgattgcaggagataaatgctgctctgggtgagcagctatctgctgaggatgaggaggctgttatggctgaatttgagaacttggaagcacaggtttttattgattttcaggagcttttatgcattttccattttgagcaaactaccaacatgaaaatgctttaattctgaactttcatgagccataaacggtttatctcttctattgttgatcatgactgtctgttgcagcttgccgttgagtctctaccagatgctccagttactgaagtacggcctgaggagaaatcagaaacacctgctgtcactgaggctgcagaagacattgacgaggttattgagcttcctgatgtacccactaaggcaccagagagaccagaagctgcagaaaaaacaaaaggtatttttgtttctatggacatttaatgtgcattatgcaatttttttctgttctttttatgatactttatgatatcacagttttggaagaacccctacctgcatagggggatggaactgagttggatagggacctccaggttgccaaatctgcaggagttgtaaattatctgccatttcattgtaataccacacccgcaagttgtctcagaattttaatgtgtacagcatctaaatatgtttgcttcaaattttcagttatcaattcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0596500, RefSeq:Os02g0596500