Os02g0604300

From RiceWiki
Revision as of 02:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0604300| Description = Nucleotide-sugar transporter family protein| Version = NM_001053903.1 GI:115447176 GeneID:4329914| Length = 5266 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0604300

Description

Nucleotide-sugar transporter family protein

Version

NM_001053903.1 GI:115447176 GeneID:4329914

Length

5266 bp

Definition

Oryza sativa Japonica Group Os02g0604300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24535211..24540476

Sequence Coding Region

24535717..24535887,24536078..24536194,24536760..24536816,24537007..24537084,24537190..24537234
,24537326..24537385,24537992..24538114,24538240..24538317,24538516..24538585
,24538785..24538892,24539011..24539144,24539224..24539300,24539495..24539543
,24539628..24539678

Expression

GEO Profiles:Os02g0604300

Genome Context

<gbrowseImage1> name=NC_008395:24535211..24540476 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24535211..24540476 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagcggaacggggtggtggaatgcagcgtgtgccggtcgcggctggtggtgccgagcccgcggagcgtgtccagggcgtacgacaagcaccgcagcaagatatcgtccaagttccgcgcgctcaacgtcctgctcgtcgtcggggactgcatccttgtcggcctccagcccatcctagtgttcatgtcaaaggttgatgggaagtttcagttcagtcccatcagcgttaactttttgacggaggttacaaaagttgtctttgctatcgtgatgctaataatccagtctagaaagcaaaaggttggcgaaaaaccacttctggcacgttcaaccttcatccaggcagcccgtaataatgcactactagcggttccggcccttctgtatgccatcaacaattacctaaaatttatcatgcagctgtacttcaatccgtcaactgtgaaaatgctaagcaacctaaaggtgctggtcattgctgttcttctgaaatttataatgaaaaggagattctccgtaattcagtgggaagctcttgctctacttcttattggaatcagcatcaatcaacttcgtactgtaccagcgggcaatactgcatttggccttcctgtcactgctattgcgtacatatacacactgatttttgtaactgttccatcattggcttctgtctacaatgaatatgccttgaaaagccaatatgatactagtatatatcttcagaatttgtttttatatggatatggtgcaatattcaacttccttggcattcttgggactgccttattccaagggccagagagtttcaatattcttcgaggacattcaagggctacgatgtttctcatatgtaataatgctgcgcaaggcattctttcttcattcttcttcaagtatgcagacacaattttgaagaagtattcgtcaactgttgcaacaatttttactggtctagcttctgctgccttcttggggcataccctgaccattaattttctactgggcatatcagttgtgtttatttcaatgcaccagttcttctctccactcgctaaagccaaagatgacaaaccagctgaattgttagagttggaagatacacagaatcatcggtcatctgaatcttcttttgtaaatatgactgctggcgctgctgaagatgccagccataggattggaactgatgagaggcaaccactattgccaacatga</cdnaseq>

Protein Sequence

<aaseq>MQRNGVVECSVCRSRLVVPSPRSVSRAYDKHRSKISSKFRALNV LLVVGDCILVGLQPILVFMSKVDGKFQFSPISVNFLTEVTKVVFAIVMLIIQSRKQKV GEKPLLARSTFIQAARNNALLAVPALLYAINNYLKFIMQLYFNPSTVKMLSNLKVLVI AVLLKFIMKRRFSVIQWEALALLLIGISINQLRTVPAGNTAFGLPVTAIAYIYTLIFV TVPSLASVYNEYALKSQYDTSIYLQNLFLYGYGAIFNFLGILGTALFQGPESFNILRG HSRATMFLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAFLGHTLTINF LLGISVVFISMHQFFSPLAKAKDDKPAELLELEDTQNHRSSESSFVNMTAGAAEDASH RIGTDERQPLLPT</aaseq>

Gene Sequence

<dnaseqindica>507..677#868..984#1550..1606#1797..1874#1980..2024#2116..2175#2782..2904#3030..3107#3306..3375#3575..3682#3801..3934#4014..4090#4285..4333#4418..4468#cactccctcctcccacccaccttccccccttctccccttccccctcacacctttcgccttcacctacacacaccggaatccgagatcccggtgaccgcgtctcgcacgcgtccccctcccttccccgccgccggatccagcccccgcgcgctcgccggagtcgccgccgagctaaaccgcgcacccgtcccccgcccccgcccaggccgagcccccgggtctccgcgcgcacgtgggggggacggcgccgacgccgacgccgcgccagatctgagagatccgcaccgacgccccccatcctcgccttccccgaggcgtcacgccagatcccccagatctggaatggtggtggtgttgttgctgctgctgctgccgtaggtatgcttaggtgagtccgtgatcctcgggactcggtcgccgcggcccgcgggtagtgggagggaggcaaacctcgtcgtcggcggcggcggcgtgaggtgctgcggagaggtggtcggggaaggaagatgcagcggaacggggtggtggaatgcagcgtgtgccggtcgcggctggtggtgccgagcccgcggagcgtgtccagggcgtacgacaagcaccgcagcaagatatcgtccaagttccgcgcgctcaacgtcctgctcgtcgtcggggactgcatccttgtcggcctccaggtgtggcttcaccctccttgtagctatatatttcattcaagtatccaaccgctaggtgtctgtgttacatgtttagccaatcccaaatactcggtagtttggtgaaatggtctgacgaaaattcctgtttatgcttaataatcatcctgagcctggagagctgtactaatgatttgctttgtatctgcagcccatcctagtgttcatgtcaaaggttgatgggaagtttcagttcagtcccatcagcgttaactttttgacggaggttacaaaagttgtctttgctatcgtgatgctaataatccaggtgtgtacttttgctgatgtttcttggtgtgcttgcattctgatgatgagtaatttaacccctataaaatgatatgtagagtacacttatagtttgtcttgatggctttggattggtaaaatactctgttagttcattagatcacttgtactcttacatgagcagcctactgaattcttctggtacaattcttctgcgtccaatttcttatagtacattcgtgtatcagaagtgattgcacatttaaaaaaaatggaaggagcagcaaatttgtgctaatcttccaaattgataagctcaactaatgcagaactaaagatcacaacaacagcctttcaagatgtgaaagcagtttcggttgatattctatgtgctacctgcacttcattatctttatgcgcaatttagcttgtcagcatgttcactgttccttgaaaatttgaagtcctacagattcgcaattgctatgctgcaacagatgtacattttatgccttctatatactttccattatgatcctacctcttacttgtttaccttctcgatgctgctttctgtgtggcagtctagaaagcaaaaggttggcgaaaaaccacttctggcacgttcaaccttcatccaggtgatttgttttctgctttcatgacttatatgaaccaccagtagaacttttttacatactcatttttaaataccttttttctttaccaataatttgtttccgctacctatgttctaacataatactgcttgttgcatgtctttttgtgacattgtctgatcatctgactctccatcattttcatatgtaggcagcccgtaataatgcactactagcggttccggcccttctgtatgccatcaacaattacctaaaatttatcatgcaggtgaatctgaagccatagttgtcgcccttctatatacccctctattgtcatcatccatgaatatatatttttatgttgtctgacatttttgagctgattatgcagctgtacttcaatccgtcaactgtgaaaatgctaagcaacctaaaggtacatattttatgcactactcaggtgttgtgcttttcttattagtgtgtatacgcatatatcataccttttgtaatccaaatttctctaggtgctggtcattgctgttcttctgaaatttataatgaaaaggagattctccgtaattcaggtaagcttgaggttgtgttgcagttatttctgactttatatatataggttgcattttgggggtaaatataaccaaatttttgtgctatataccatctgttagtcttctaccactatagtgcaatttaaagattactgggtcatgtgttcactgctttgtgttacatatcctctatagaatcatattgccagtattcggctactttgtacatagagatgctttaggagtattagtaaactcttaaataaaatcaagtgtgagagaattttgtaagtgattttgcatagtaaagctgagtctcaataaagctagcagtgatagtgaatgtttgtctattgtctttgtgtcagtttccactggtcttatggtatgtttcaaataagtctgcatcacaatgctaggttcaacttgtactttactagaattgccatgttttatcatttaatgttgatgaccataatcttcaatctggattacttgtaactcactatgttactgaggtatattacatgacaaagtgccttttgcatagctcttacgcaacattctagcatcatcaatcatgctgattttctcctgctctcttgccccccttaattttgtcagtgggaagctcttgctctacttcttattggaatcagcatcaatcaacttcgtactgtaccagcgggcaatactgcatttggccttcctgtcactgctattgcgtacatatacacactgatttttgtaagtagcttccacaccatttgacctcttaggatttccattttctttcacttcattttctcagctctctcaacagacaatatgctttaaaattatttatattctcttgcaactgtgcattgtaggtaactgttccatcattggcttctgtctacaatgaatatgccttgaaaagccaatatgatactagtatatatcttcaggtaaattacgtagtattggaaatttattgagtaatgatctttattcttctatccaactatctacttatttcgtattagctattttgtttagttgtccaagattgtattttgtagtataaggcatatgatgattcttttttttatccgcattattcttgtcttttgtttgcttcactgttctttttatatactttgcagaatttgtttttatatggatatggtgcaatattcaacttccttggcattcttgggactgccttattccaaggtacaattattttttttggagtgttatcatgcatgatcaatatttttatcagtaatcagcgtcagattctacaataagacaaccattaactgtcttatgtggtcatattcatataatctttagtgaacgccatgttgtctaatgttttgacaatcaaagcaccatttctttgacataatcatctcctgtctatttgcagggccagagagtttcaatattcttcgaggacattcaagggctacgatgtttctcatatgtaataatgctgcgcaaggcattctttcttcattcttcttcaagtatgcaggtaaattccgtgcgtacttttttttagtttcctgtgtaaacactatcatttgctgttccgcctatattattctataaatttatatcttcaaattgttaatgttataatcaatttgcagacacaattttgaagaagtattcgtcaactgttgcaacaatttttactggtctagcttctgctgccttcttggggcataccctgaccattaattttctactgggcatatcagttgtgtttatttcaatgcaccaggtgagtttgcctgcttaactaaatttcattgagacgacattttttgtcttccatatacataactgctatctgttctcagttcttctctccactcgctaaagccaaagatgacaaaccagctgaattgttagagttggaagatacacagaatcatcggtacgtttctaccttgttttaaatggttggatcatggtacttgttgccatatttttttggttttcaccttcgttctaatcaacaaatgacaaacaaggttatagtgactttaatatgtactgtgcatctagatatgtgctaatttccaaatatttcttgttgcattacctcataagatacatattatgttgcaggtcatctgaatcttcttttgtaaatatgactgctggcgctgctgaagatgtatgtgactcatttatttctaaagaaaaaaagattaatttgtgttagaacaattacattattagttgcacattatcatttcaggccagccataggattggaactgatgagaggcaaccactattgccaacatgaagtatttttttgaggtacgcatggcttctttaaccagaacttttagtttgtttgatgtggcttgtttgctttagtgactagtaatatggcacaagctaagatatgaaattatggacaagtaaacagagacgtgcttgtgcccacaaactggtggatagaataactagattgatttgcgggaattaggcagagacagactctccgcatagattaatagcggcatcaaatgtgtgacctgaatatctgatataaaaccgaagctcccattgtttgggtattgggtcataagttttaagaccaaagtgacctgataaattttacctgtaagttagtctgatatgggttccagaattagctttttgttcctaaaatggaaggaaatcatgaaatagtcagataccttgtgggtgtgatactttatctaattcatctgtccagaactaagtttctgaaaatgtatgttcttttgtttctgcaggtagtgtagaggacaattctttttgccatccaacttggaggcagcagagtttatatagcgtggcgagtgaaataaactattgtacactgtaaaggcaaagaaagaaacatcgatgtatttttcccctttgtcatttttattatcttttgtgatagggagggttgtcagctgtggcctaacgagtgtggcacaacattttttggataggcaaattccacatgaatccccagatacgatactagtataaagcaattttttccctggatatgtatactcaaatgtatcaatgagttactgttgttatatggaacttttgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0604300, RefSeq:Os02g0604300