Os02g0608300

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Revision as of 02:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0608300| Description = FAR1 domain containing protein| Version = NM_001053921.1 GI:115447212 GeneID:4329935| Length = 4754 bp| Definition ...")
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Gene Name

Os02g0608300

Description

FAR1 domain containing protein

Version

NM_001053921.1 GI:115447212 GeneID:4329935

Length

4754 bp

Definition

Oryza sativa Japonica Group Os02g0608300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24717700..24722453

Sequence Coding Region

24718149..24718223,24718999..24721026,24721155..24721190,24721294..24721407,24721626..24721694
,24721779..24721913

Expression

GEO Profiles:Os02g0608300

Genome Context

<gbrowseImage1> name=NC_008395:24717700..24722453 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24717700..24722453 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggaggcggaggaggcgttccctccgcagaggaatccccgccgcgcgcggcgccgcgacctcaacgcactggatcccagtttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcggccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaactgtccagccaagatcagagtaaagctatggggagataaattgttgcatgtagagttggcaatccttgatcataatcatcctgttagcccagcaatggcaaggtttttgaactcctataagcagctatctggccctgcaaagaggcgattacgtatgggtggccctggagctatgccagtggaagaaccaagcaagatgcctgttgataagttgggtgcacttgaggagcttttgtttggagagagcaagcaccatagttttgttgagaggggccgcttgaagttccaacctggagattcagaagcccttcggcttttctttactcgtatgcaagccaaaaatgcaaacttctttaatgtcattgacttggatgatgaaggctgtgtcagaaatgtcttctgggtagatgcacggtcaagatccatgtatgagttctataacgatgttgtcacacttgacacatcgtatgtggtcggtaaatatgatatgcctcttgcaacttttattggggtgaatcatcatggccaatctgttttattgggttgtggcctgctttcagatgaaacagcagaaacctattcatggctatttaaggcttggatagcatgcatgtatggtaatcttccaaaggctatcatcactggccactgcaggggcatccagagtgcggttgctgaggttattcctggagtccatcatagaatatgcctatttcatataatgaggaaggcgacagagcgattaggtggtctgtcggagtacgcagctatcagcaaggctttccaaaaagctgtatatgattctttaaccatagatgagtttgaaggaaattggaatgctctgattacatacaatgggcttcagggtaatgactggctaagatcaatttatgagtgccgatactcatgggttcctgtttttcttaaagatacattttgggcaggaatgtctgctacacaaagaaatgaaaatatcattcctttctttgatggatatgtagatttgaaaaccacattgaagcactttcttgggaagtatgagatggccttgcagagcaaatatgaaaaggaggcccaagcagattttgagacattccataagcagcgcccacctgtgtcaaaattctatatggaagagcaactgtccaaggtatacacccataacatcttcaagaaattccaagatgaaattgaagcaataatgtactgccatgtatctttcattaatgttgatggcctcatatccacattcgatgtcaaggaatggattttccttgaagatggtaaaaggactatgagcaagatctttacagtgacaaataacacagataaaaatgatttaacttgtatctgtggaggtttccagtttaatggaatattgtgtaggcatagtctctcagtcctcaagtttcaacaggttcgtgaaattcctccacactatgttcttgataggtggaaaaaggatttcagacagttgcatgtgatggggcgtccttcaagtgatgttgttccaaacaatcgtgtggatcgatatgattatttgtcaatgagatgtctgcagctagttgattcagcagtcctatcagataaatatcgtcttgctttgagattggtgagggagatggagaagtttatgttaaacagcaacacgcatgatgatacacaaccaaggatcaagtctcgcattcctaaagcaaataaaccaaatacagtggttggtcaaaatctggtaaacgttggcacttacaatggaaatgataggcccaaagcaacaacagaggcttcttcattaacacagggattggatgtccagaagggaggagcagaaaagggcatagttcctgctggttacattggactgccagctaatgttcagcaattcgtaggcagtcaaacagcgattcgcccaagcattgtgtatatggttccgagtggtgttgacccacaggcatttggaaatggtgttctgatgcctgttgtgtaccagcagatgttccaggtaccccagcagccaaatggaaccatgccagatacttcagcaaatggaaaaaggaagcggcctcgtgcccagaagccaacagaggcatctgaacagtcaaatggaaccccggcaacaggacccacatctgggtag</cdnaseq>

Protein Sequence

<aaseq>MMEAEEAFPPQRNPRRARRRDLNALDPSLEESDGEDIGVPEVGM VFNNHTEVNRFYRRYARRVGFGVSVRRSSFSQEGTCLYLELMCCKGGRPRYEPKFRKR ASSTTNCPAKIRVKLWGDKLLHVELAILDHNHPVSPAMARFLNSYKQLSGPAKRRLRM GGPGAMPVEEPSKMPVDKLGALEELLFGESKHHSFVERGRLKFQPGDSEALRLFFTRM QAKNANFFNVIDLDDEGCVRNVFWVDARSRSMYEFYNDVVTLDTSYVVGKYDMPLATF IGVNHHGQSVLLGCGLLSDETAETYSWLFKAWIACMYGNLPKAIITGHCRGIQSAVAE VIPGVHHRICLFHIMRKATERLGGLSEYAAISKAFQKAVYDSLTIDEFEGNWNALITY NGLQGNDWLRSIYECRYSWVPVFLKDTFWAGMSATQRNENIIPFFDGYVDLKTTLKHF LGKYEMALQSKYEKEAQADFETFHKQRPPVSKFYMEEQLSKVYTHNIFKKFQDEIEAI MYCHVSFINVDGLISTFDVKEWIFLEDGKRTMSKIFTVTNNTDKNDLTCICGGFQFNG ILCRHSLSVLKFQQVREIPPHYVLDRWKKDFRQLHVMGRPSSDVVPNNRVDRYDYLSM RCLQLVDSAVLSDKYRLALRLVREMEKFMLNSNTHDDTQPRIKSRIPKANKPNTVVGQ NLVNVGTYNGNDRPKATTEASSLTQGLDVQKGGAEKGIVPAGYIGLPANVQQFVGSQT AIRPSIVYMVPSGVDPQAFGNGVLMPVVYQQMFQVPQQPNGTMPDTSANGKRKRPRAQ KPTEASEQSNGTPATGPTSG</aaseq>

Gene Sequence

<dnaseqindica>450..524#1300..3327#3456..3491#3595..3708#3927..3995#4080..4214#cagtctctcctctattctctctcctgtgtttccggcggaggcacgagcgcacggacagcctcctccccccgcctccacctccgcgcggtcgccgccggcgaggaggcggcgccggacgagctcctctccttccccgccacgccgtagcatcctcctcctcccccgcgcgcgcgccgctgggcgagcaagtctgggggccaggagcgagcagcgcggcgcggcgcggcccggccaggcctctcattccaccaccactggcgcccatctcggcggctcggatcgaattcagaggtgattcgagagagactcttctctcgtagcccctccgttcactccctcctcctcctcgttgtctcgtgttccggcgtggcgtagattggagacctgtattgattttttttttttgcgccttcgcacgcagtttcgtcgcttgctctccgacggcggcgatgatggaggcggaggaggcgttccctccgcagaggaatccccgccgcgcgcggcgccgcgacctcaacgcactggtttgatccgattgaccccctcagtttttttttttaaaaaaaaattattgttgttatataactccccatcggtttagcggccctgtggccctgtcattgtagacgtttgatgtatgcagggtttgaggttttactgtgaaatttgactctcgtttcgaggttttacctggaatggattgtctcgattttatggggggtttagggttccttacgtgaatgaatggctgtgtgtttgcagtggttcatgttctagtaaggaattgtgatttcgggtttatatatttacagcggcaggttgtttgtgagtaaaggactcgaaggttaggatttttttgtagttccaatttgttcgtatttaggctttactgttttatattggtgagttggagtgacattttagtttcctgaggcagtttagttcaacccattatactagttcatcctcgattggttttgtgtgttgcaacctctgactattaggatttagtacttaacatagatgactgctccagctcttttaatgggccaaacgaggtatcatgccgcgccatcctgatgatcttaaatttgccaaacaaagtatcatgctgtgccatcctgataatcctaaatttaggacattctatatgtgcaagttcaacgagtagtgattccatttctatgttgtagagaaggttgattttttagttgtcatcaatttgtataagctggaagacactttaggttttgaacatgttgcatttgctatgttctgatgattgaggtattatttcaggatcccagtttagaagagtctgatggagaggatattggtgttccagaagttggcatggtgttcaataaccacacggaggtcaaccgattctaccgaaggtatgctcgccgtgttggctttggggtgtctgttaggaggtcctcattttcacaagagggcacctgcttatatctggagctcatgtgctgcaaaggagggcggccacgttatgagccaaagttcaggaaacgggcctcttcaaccactaactgtccagccaagatcagagtaaagctatggggagataaattgttgcatgtagagttggcaatccttgatcataatcatcctgttagcccagcaatggcaaggtttttgaactcctataagcagctatctggccctgcaaagaggcgattacgtatgggtggccctggagctatgccagtggaagaaccaagcaagatgcctgttgataagttgggtgcacttgaggagcttttgtttggagagagcaagcaccatagttttgttgagaggggccgcttgaagttccaacctggagattcagaagcccttcggcttttctttactcgtatgcaagccaaaaatgcaaacttctttaatgtcattgacttggatgatgaaggctgtgtcagaaatgtcttctgggtagatgcacggtcaagatccatgtatgagttctataacgatgttgtcacacttgacacatcgtatgtggtcggtaaatatgatatgcctcttgcaacttttattggggtgaatcatcatggccaatctgttttattgggttgtggcctgctttcagatgaaacagcagaaacctattcatggctatttaaggcttggatagcatgcatgtatggtaatcttccaaaggctatcatcactggccactgcaggggcatccagagtgcggttgctgaggttattcctggagtccatcatagaatatgcctatttcatataatgaggaaggcgacagagcgattaggtggtctgtcggagtacgcagctatcagcaaggctttccaaaaagctgtatatgattctttaaccatagatgagtttgaaggaaattggaatgctctgattacatacaatgggcttcagggtaatgactggctaagatcaatttatgagtgccgatactcatgggttcctgtttttcttaaagatacattttgggcaggaatgtctgctacacaaagaaatgaaaatatcattcctttctttgatggatatgtagatttgaaaaccacattgaagcactttcttgggaagtatgagatggccttgcagagcaaatatgaaaaggaggcccaagcagattttgagacattccataagcagcgcccacctgtgtcaaaattctatatggaagagcaactgtccaaggtatacacccataacatcttcaagaaattccaagatgaaattgaagcaataatgtactgccatgtatctttcattaatgttgatggcctcatatccacattcgatgtcaaggaatggattttccttgaagatggtaaaaggactatgagcaagatctttacagtgacaaataacacagataaaaatgatttaacttgtatctgtggaggtttccagtttaatggaatattgtgtaggcatagtctctcagtcctcaagtttcaacaggttcgtgaaattcctccacactatgttcttgataggtggaaaaaggatttcagacagttgcatgtgatggggcgtccttcaagtgatgttgttccaaacaatcgtgtggatcgatatgattatttgtcaatgagatgtctgcagctagttgattcagcagtcctatcagataaatatcgtcttgctttgagattggtgagggagatggagaagtttatgttaaacagcaacacgcatgatgatacacaaccaaggatcaagtctcgcattcctaaagcaaataaaccaaatacagtggttggtcaaaatctggtaaacgttggcacttacaatggaaatgataggcccaaagcaacaacagaggtatctgttcaacctgtagttaacattgtaaagatgcctattatgttggaagcattatggtaaataactatgagaataatcatcttaacccactgcctatctgattgatcttattttgcaagatgcaggcttcttcattaacacagggattggatgtccagaaggtactacatttagctatggcatgagtaaattttggtgcattatcctctttataggtgacatttgttaataaggatattgatttctatttttttttaactatagggaggagcagaaaagggcatagttcctgctggttacattggactgccagctaatgttcagcaattcgtaggcagtcaaacagcgattcgcccaagcattgtgtatatggttccggtatgtcaaagttacaaatgactatatctgctcaactgtgccttgatagtatctacagcaccagaggaccaaattctaggatatttggttgcttttcttgcacaaacatatgtggattcatacaactcatctttatttgttaatgcataagccccaagtactcatcatttttcaggatatgtgctgtgaacttgattctttcttatttaatttttcagagtggtgttgacccacaggcatttggaaatggtgttctgatgcctgttgtgtaccagcagatgttccaggtttgtatatttttgtgttaggacttgagaagttaatccgttcgtcttgtaggatgatttcacgtttatcgctggtatatctaggtaccccagcagccaaatggaaccatgccagatacttcagcaaatggaaaaaggaagcggcctcgtgcccagaagccaacagaggcatctgaacagtcaaatggaaccccggcaacaggacccacatctgggtagattgaacagtttctcatttagtcagaactcagaacaggttttcttgaattctcacccctgttaaccttcattgtgcaatcgttcattgagtttgttagaatctgataaccacatttgccataacgttcacatattctccataactgcatcccaggtctttgtaaatatgcagaggaagtgaagagttgcctagagaacttcaaacggatgctagcactaacaaaagtacatcaaatccatcttggctgtgatctgaagcctttgtgctgcagagattgagcacggccaagcccaagcgccattcttcatttggatcatcctggagtgaagtccagggttgaaaaatagccttcacctcatttgactttagttgattccagcaacattagccgataatgtttttgtggctctgccatgatatacaagttctgaaatctcgctgtcgtttccatggtaatatgtaaatgattttttgatggactaacctggtcatttgactggatttttttagttcggaggcttaaagactcccttagcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0608300, RefSeq:Os02g0608300