Os02g0610400

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Revision as of 02:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0610400| Description = Lupus La protein family protein| Version = NM_001053933.1 GI:115447236 GeneID:4329949| Length = 4297 bp| Definition...")
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Gene Name

Os02g0610400

Description

Lupus La protein family protein

Version

NM_001053933.1 GI:115447236 GeneID:4329949

Length

4297 bp

Definition

Oryza sativa Japonica Group Os02g0610400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24838449..24842745

Sequence Coding Region

24838659..24838770,24839178..24839256,24839485..24839632,24840172..24840568,24840656..24840736
,24841156..24841304,24841620..24841762,24842111..24842263,24842380..24842458
,24842581..24842643

Expression

GEO Profiles:Os02g0610400

Genome Context

<gbrowseImage1> name=NC_008395:24838449..24842745 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24838449..24842745 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccaccgcggcgccgtcgatcgacgaggccaaggcgaagagcgttctccgccaggtggagttctacttcagcgacagcaacctcccgcgcgataagttcctgagggagacggtcgagcagcgcgaagatggattggtaagcttggctttgatatgctctttcgcgcggatgaagtcgcacctcgggctggacgccgccgtgaagcccgaaactgtgccagaggagacagtgctcgcagtagcagaggtgctacgtcgttcccagatgcttcgtatctcggaggatggaaaaatggttggtcgagctagtgagctgttgaaggcagatgaaatcatcaagcaagtggactcaaggacagttgctgcgtcaccattgccttacaatgtaaagctggaagatgtccaatctttctttgcgcaatatgcaaaggtaaatagtgtcaggctaccacgccatatctcaaacaaaaaacacttctgtggcactgccttagttgaattttcagaagaggatgaagcgaaaattgttttggagaataatttgttctttgcaggggcaaatctggaaataaaactaaagaaggaatttgatgctgaaacagaatctaaaaaagaagcatatgaaaaggcacatcctaagaaggacgagcagaatgaaggctatcctaaaggcctaattgtggccttcaaattgaagagaatcacggttgatggtggggtgcaacaaaactgtgcagacaatgatactgccactgaagaagaaactccaaagtccatgaagaaaacatcaactggggaatctgaagagaggactaccgtgaacagtgatatggaggaacagaagtcatcagacgacatgactgaagcgaaagaagtgaatgctggggaagctacagaatctggtgacaagtgcacagttgatgccttgctagaaagtgaaaagaagggtgataatgaaacatcgatcaaagatgacagaggcctctctggcaaagcgaatagtccaatctcaagggaagatctaaaagaagcgttcaaaaaatttggaacagttcggtatgtggacttcagtatcggggatgaatcgggataccttcgtttcgaggattctaaggcagctgaaaaagcccgcatgtctgctgtattagctgatgaaggtggcttgatagttaaagaccacattgttaccttggagcctgtgactggtgaagctgagaaggattattggaatacaatacgtggcattcaagggaaatacaaggacaataggagttacaaaggaaggactggaaagagctacagaggaggaaagcagttcaatgggaagcgaggccgacattctgattcctccgaaaagggtgcgaataaaacacagaaggtcgaagctgctgcttag</cdnaseq>

Protein Sequence

<aaseq>MAAATAAPSIDEAKAKSVLRQVEFYFSDSNLPRDKFLRETVEQR EDGLVSLALICSFARMKSHLGLDAAVKPETVPEETVLAVAEVLRRSQMLRISEDGKMV GRASELLKADEIIKQVDSRTVAASPLPYNVKLEDVQSFFAQYAKVNSVRLPRHISNKK HFCGTALVEFSEEDEAKIVLENNLFFAGANLEIKLKKEFDAETESKKEAYEKAHPKKD EQNEGYPKGLIVAFKLKRITVDGGVQQNCADNDTATEEETPKSMKKTSTGESEERTTV NSDMEEQKSSDDMTEAKEVNAGEATESGDKCTVDALLESEKKGDNETSIKDDRGLSGK ANSPISREDLKEAFKKFGTVRYVDFSIGDESGYLRFEDSKAAEKARMSAVLADEGGLI VKDHIVTLEPVTGEAEKDYWNTIRGIQGKYKDNRSYKGRTGKSYRGGKQFNGKRGRHS DSSEKGANKTQKVEAAA</aaseq>

Gene Sequence

<dnaseqindica>3976..4087#3490..3568#3114..3261#2178..2574#2010..2090#1442..1590#984..1126#483..635#288..366#103..165#gtcggcacgctgcacagtacgcgcgctgctcctaaacccaaaccctaaagccgccgattcctctcctctcctctccacaccagctcgatcgcgatcggggtcatggccgccgccaccgcggcgccgtcgatcgacgaggccaaggcgaagagcgttctccgccaggtgtccgatcccgccttcttgttgtttgttcacggcggatttctcccccttttggcgattttgtttgagcatttatttttgggggggaggtttgagcttttgatttggtttggttgtcgcaggtggagttctacttcagcgacagcaacctcccgcgcgataagttcctgagggagacggtcgagcagcgcgaagatggatgtaaatgatctctcgcgcagtacattttccacgcggattgcttttctccggcgcgatgattgagtgctgaacttagcgtcttttttttttcttctcattttgttggaaatgtgcagtggtaagcttggctttgatatgctctttcgcgcggatgaagtcgcacctcgggctggacgccgccgtgaagcccgaaactgtgccagaggagacagtgctcgcagtagcagaggtgctacgtcgttcccagatgcttcgtatctcggaggatggtgattcctctctttcctcttaattccagttattcgtgattcactagcaacgagcacaaattgctggcaattgaatttcaaaaggagttggtaaataccagtgaaacatgtgaagtgtacatttttagataacgatgtaaagtgtacatatactctgctttgtgacctgctattcaatgttgtcaataaacttttgttttccttctttagtaatgataaatatgccatgttctcaaatacagtgttagtttgggaactagagctggtctacttttatgtgagttaagtttctctagtaaattggtttcttttttatcattgctgatttgctgtatttttcaaatgcaggaaaaatggttggtcgagctagtgagctgttgaaggcagatgaaatcatcaagcaagtggactcaaggacagttgctgcgtcaccattgccttacaatgtaaagctggaagatgtccaatctttctttgcgcaatatgcaaaggtgtgtccaagtactgaacacttatagtgcacaacaagcttgcagttagtttgaaatgaaattgaaatgtaatgcaaagagaaaaggtggcatggctaggctgcataaattcgattcaaagttcaacagaacaaaggaagttttttttctcgtgaacctttttcataattaggattttgagtatcatgaacataattaccagttatgcatgctggctatctggagcttttccagtgttatgattacatgtgcaatactatactgcaaatatcaatgaattaacattttcttggtgtacttgtgtctgaattgtaggtaaatagtgtcaggctaccacgccatatctcaaacaaaaaacacttctgtggcactgccttagttgaattttcagaagaggatgaagcgaaaattgttttggagaataatttgttctttgcaggggcaaatctggaaataaaactaaagtaagccactaacatatcctttttgcatgataatcatacatgtggaatgtgcagataaaatgcttgctttagtactatcaccataaatttctatgttaattccaatatattcccctctagctgtactgccataccggtaagttgttagttatcaaacctcatttcattgccaacattgctttcttttctattaagtgcaatttgaatgaaatgtgcgaaataagctgcattaattttgtacttcttttgtttagtttggtgtcagatcatgcaagcatttccctctagcaagttccttgtcttgcatgtttacctcttttagtgatacttgaattaatgatgcctttcacatatttgcgttcattctgttgctgtatgtgacattatgtaacttataattcgttgcctgaatcatgaaggaaggaatttgatgctgaaacagaatctaaaaaagaagcatatgaaaaggcacatcctaagaaggacgagcagaatgaagggtgacatttttacaggctgtctgttcaattacttttccttcctttagagttcaaatcaagaccattttcctggaatttgtgttgcagctatcctaaaggcctaattgtggccttcaaattgaagagaatcacggttgatggtggggtgcaacaaaactgtgcagacaatgatactgccactgaagaagaaactccaaagtccatgaagaaaacatcaactggggaatctgaagagaggactaccgtgaacagtgatatggaggaacagaagtcatcagacgacatgactgaagcgaaagaagtgaatgctggggaagctacagaatctggtgacaagtgcacagttgatgccttgctagaaagtgaaaagaagggtgataatgaaacatcgatcaaagatgacagaggcctctctggcaaagcgaatagtccaatctcaagggaagatctaaaagaagcgttcaaaaaatttggaacagttcgggtattttaatccacaccactttctagctttagtttttcttggtataaacaccagtaacagttctgtttaacattatggaatgaaaattatgaaacatatagcattcttctagattcaaatatggtccacagagagctcagattttaactcatgggtcatatggcattatctttgtactttcatttgtccttaaagatctggtgggatattaagcatgacgagttgtaaaattattaagatcaattaactatggaatgggaaatgcctgaaaatgttcttgatacacaccataaaatcgtggtaatagactaatagctagtcctaattgtaaattcatatttgtaaaagtttatttatggtccttggaggagcacagttatgaggtagtggtatgacataatgttaattatctatatctttggtacctggcatggctgtggtggtgaactgttcatattgtatgtcactatgtcacaaattcacatgacactttttaattccgttttttactttcattgcacatgtttttcttcctgaagtatgtggacttcagtatcggggatgaatcgggataccttcgtttcgaggattctaaggcagctgaaaaagcccgcatgtctgctgtattagctgatgaaggtggcttgatagttaaagaccacattgttaccttggagcctgtgactggtaattgacaatttgacatgtgtttattagagtttttttaataccattactgcttgcattgtatcatgattaataaatgtagaatatccattatagaaaatttttagttccatttaatgatacttaggtggaatcgactcctattattgtttgacgctgtaaattaattcctcaaatctggatgcaattaaattggtttgtggggtcttactttttttgtttttgcaggtgaagctgagaaggattattggaatacaatacgtggcattcaagggaaatacaaggacaataggagttacaaaggaaggtattcaatgaattaacagtttaattttatttgtttatgtcctgtttggtactacgtacaatattatctctagaagtaattgcagacaattatcaggaaaggcacactacagcattcagtaattttgtggcaaattagaccgaaataactttgtgtgccttttgagaatgttatgactttttcatttgcaattttcgagctagatgacctgcgctaattgcaatttatttgtgcattgcagtattgtggttaccacaaatatgctccttaattccttgtatatatatgtcgaatagatacttccttgcacgaaaattgatcatctcgtatgcccatgtttaatgttctctgcagaatataatgtgtctttgccccttgtcatatatatgttattgctctttttctaggactggaaagagctacagaggaggaaagcagttcaatgggaagcgaggccgacattctgattcctccgaaaagggtgcgaataaaacacagaaggtcgaagctgctgcttaggctaattttaacgtcttcactcgaccgagaagtaacatgctacgcttactatcggtggtcttgtatatttattatatcagagaccatttattaccatattttgtgactgttattgtccattttttatgctaaccttgttccaaggtatacttccgtaatgattagcctttagtaacggctttgccgtttacttttgaatggctttggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0610400, RefSeq:Os02g0610400