Os02g0611500

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Revision as of 02:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0611500| Description = Similar to Eukaryotic initiation factor-like protein| Version = NM_001053942.1 GI:115447254 GeneID:4329958| Length =...")
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Gene Name

Os02g0611500

Description

Similar to Eukaryotic initiation factor-like protein

Version

NM_001053942.1 GI:115447254 GeneID:4329958

Length

6393 bp

Definition

Oryza sativa Japonica Group Os02g0611500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24926200..24932592

Sequence Coding Region

24926812..24927834,24928301..24928543,24928773..24929123,24929204..24929291,24929646..24929743
,24930281..24930493,24930618..24930713,24931592..24931663,24932377..24932535

Expression

GEO Profiles:Os02g0611500

Genome Context

<gbrowseImage1> name=NC_008395:24926200..24932592 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24926200..24932592 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcaggcggatcaggcggtgatcagcctgcgcccgggcggcggcggcggcatcggtggcccgcgcgccggccgcctcttccccttcggcgcctccacaggctccctcgacttcctccgcccgcgcggcggcgcatcctccggcttcgctgccaagcttggagacttgcggtttgaacctctcgagcgggttcgttacactagggatcaacttgttgaactgcatgagattatcgacatacctgagaacatcttgaagcttaagcaagatattgacatagaactccatggtgaagatgaaccctggattaacaatgactcaagtgtgcaaactcagtcatataaccgctacgctgagacagacaaccgtgattggcgttcacggattgaacaacctgtgcaaactcctgctattggtggtgaagagaaatcttgggacaaatttcgtgaagcaaaagaatcatacatttcaagtggaaagcaagatcaatttaataatcaagacaaattgagctcccagttcagtgcaaaagctcaggttggtccggctcctgctcttgtcaaggctgaagtcccttggtcaatccagagaggcaatctctccaacaaagaaagagttctgaaaacagtgaaaggtatactgaacaaattgactccagaaaagtttgatcttcttaagggccagttaattgaagcagggatcactacagctgatattttgaaggatgttattagtctcatatttgagaaggctgttcttgagcctaccttctgtccaatgtatgctcagctttgctttgatctcaatgagaagttaccctcattcccttctgaagaacctggtggtaaagagatcacgttcaaacgtgtgctgttgaacaattgccaagaagcatttgaaggtgctgacaatctgcggtctgaggtcaataaattgactggtctagaccaagagatggagagacgtgataaagaaaggctagtgaagcttcggacacttggaaacattcgtcttgttggtgagctacttaagcaaaaaatggtccctgagaagatagtacatcacattgttcaggagctattaggttctgaaagcaacagatgccctgctgaggaaaatgtggaggccatctgtcagttcttcaacacaattggtaaacagttggatgagaatccaaagtctcgacgatttaatgacgtatacttcaaccggctgaaggatctaacaactaattctcagttggcatcacgattgaggttcatggcacgcgatgtccttgatcttcgttcaaaccaatgggtgcctcgacgtgaagagatgaaagctaagaaaatcagtgaaattcatagagaggcagaaaacaatcttggattgcgtccagggtcgactgcaagcataagaactggccgtactggtactggaggtggaggacccctttcaccaggagctttttctatgaaccaacctggtatagttggcatgttgcctggtatgcctggagcgagaaagatgcctggaatgccagggctaggtagtgatgactgggaagttccgcattctagatcaaagcccagagctgatccagttcggaacctcaccccatcattggccaataagccatcacctaataattccagactgcttcctcaaggcagtgcagcattaattagtggcaagacgagtgcacttgtgggcagtggtggcccactatcccatggtctggttgtcacaccatctcaaactacaggaccaccaaaatcactcatcccagctccatctgtagatcctatagttgagcaaccagctgctgcccccaagccaagctctacagagcttcagaagaagaccatatctcttcttaaggagtatttccacatacttcttctacatgaagcacaacagtgcattgaggagctgaagagtcctgattactacccagaagttgttaaagaagccatcaatcttgctcttgataaaggcaccaattccatcgatcctcttttgaggctgttggagcatctctacaacaagaatgttttcaaagcgactgacttggaaactggatgcttgctttacagttctcttcttgatgagcttgctattgaccttccaaaagctccagtacattttggtgaagttattgggcggctggtcttgtcacattgcctgagcatagaagtcgttgaggatactctaaagaaaattgaggacagtttctttcgtgctgcagtgtttgaagctatgatgaaaatcatgaaagcaaatccatcaggtcaggctatcttgggctcacatgttgctaagatcgacgcgtgcagcaaacttctatcctcggaataa</cdnaseq>

Protein Sequence

<aaseq>MTQADQAVISLRPGGGGGIGGPRAGRLFPFGASTGSLDFLRPRG GASSGFAAKLGDLRFEPLERVRYTRDQLVELHEIIDIPENILKLKQDIDIELHGEDEP WINNDSSVQTQSYNRYAETDNRDWRSRIEQPVQTPAIGGEEKSWDKFREAKESYISSG KQDQFNNQDKLSSQFSAKAQVGPAPALVKAEVPWSIQRGNLSNKERVLKTVKGILNKL TPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPTFCPMYAQLCFDLNEKLPSF PSEEPGGKEITFKRVLLNNCQEAFEGADNLRSEVNKLTGLDQEMERRDKERLVKLRTL GNIRLVGELLKQKMVPEKIVHHIVQELLGSESNRCPAEENVEAICQFFNTIGKQLDEN PKSRRFNDVYFNRLKDLTTNSQLASRLRFMARDVLDLRSNQWVPRREEMKAKKISEIH REAENNLGLRPGSTASIRTGRTGTGGGGPLSPGAFSMNQPGIVGMLPGMPGARKMPGM PGLGSDDWEVPHSRSKPRADPVRNLTPSLANKPSPNNSRLLPQGSAALISGKTSALVG SGGPLSHGLVVTPSQTTGPPKSLIPAPSVDPIVEQPAAAPKPSSTELQKKTISLLKEY FHILLLHEAQQCIEELKSPDYYPEVVKEAINLALDKGTNSIDPLLRLLEHLYNKNVFK ATDLETGCLLYSSLLDELAIDLPKAPVHFGEVIGRLVLSHCLSIEVVEDTLKKIEDSF FRAAVFEAMMKIMKANPSGQAILGSHVAKIDACSKLLSSE</aaseq>

Gene Sequence

<dnaseqindica>4759..5781#4050..4292#3470..3820#3302..3389#2850..2947#2100..2312#1880..1975#930..1001#58..216#accccgcccccaatccgcgcctccgtctctccgcctctcttcttcgataggcggatcatgacgcaggcggatcaggcggtgatcagcctgcgcccgggcggcggcggcggcatcggtggcccgcgcgccggccgcctcttccccttcggcgcctccacaggctccctcgacttcctccgcccgcgcggcggcgcatcctccggcttcgctgccaaggtgagaccgctccatttggggatggtgggggtgatggtcctagggttcgatcctcgcggaaggggacatatggggggggggggggtctgcggggtgcattgcgagtgctggctgatgggtgtgacatttcactggttttttggtttgatactcccctttgatttgcttgaaggatatacttgatttagaatctgtatttctgatagcatttgtgaacaataatgattgacattatcaaaagagtgtgttttactattcttagtgcagtgcttctactctttatcaacaactagctgtgcaaatcaaaaagcaatgtagatgaatggaggagcaaatcggcccctctatttgccccaacaattgcacttctcccttcgctttattcacagggaaagtccctcaatgttctaacagcaaactaaaagaggcttcgagccttcgatattgtagtttgtactaactgcaataaacccagtgttagagaacttttacccaaagaaaacaattagctagaatacaatccatcctagatcgttacatgctccgctgggccaatcaaatggcgagattcttgagttgcaacttgttggcttgtttcaaatgcattttgtctagactgtgtttctggtctggttcatttaatatgagccaccagatatgaatatatagtttattaacctctgcttggttggcatttgccgaatctgttacagcttggagacttgcggtttgaacctctcgagcgggttcgttacactagggatcaacttgttgaactgcatgaggtatttatctgttgctacttatttacttactgtatttcacatgatgaaattaatcattatggaacatttagtatagctgtcttctataatgatggagctgctcatattttgaaatattgataaaccaatagtgcggtttcactgaatctatttgcttggtttatgaaacacactgctcagttgctcacctttgttttgcacatattctgcgttttacatattatatttaatatatgtgcattgagaactgaagatttggaagtgagataacaatctagctatccaaaattcacttcaagctttaggggtgattcagttgcttgcacttgtctatgttgaatatgacaaaatgattagagaaattgactttggtactcagaaaatctgtctccttttattttttctgttgatcttttctgctatctgatgtatgaaacttgtataacaaaattagttttcctctggtgttctatggctcttcatttccctgtaaagggaagttgagcatgccatcatgttgtgccttcagttccacatatatatcatttttgtgttatggacaatgactaagttgtacatgaaatggcctttgtgccttgaataattcccaatcatgctaaatcttttcccctacatacataatggactctcctgcagtaattctgttctaaaaccactcgaattttaattgtaacattgataggagtgaagcaaagttgtggaacaacctatgtttcagagaagtttaaatggataaaacaacatatatttgcaacagttaccactggttcttgtattcataaccaaatattcttgtcttctgctttatttccctcgacatctttccaattacatgctttgattctatggttttgcagattatcgacatacctgagaacatcttgaagcttaagcaagatattgacatagaactccatggtgaagatgaaccctggattaacaatgactcaagtgtgagaactcttcctttacctttcaactgttcctatgtgttgcaaactgtatctgctcagtaagactggtgcagtttcacgtttactgattactacctgtttgatgttttatcatatctggcaggtgcaaactcagtcatataaccgctacgctgagacagacaaccgtgattggcgttcacggattgaacaacctgtgcaaactcctgctattggtggtgaagagaaatcttgggacaaatttcgtgaagcaaaagaatcatacatttcaagtggaaagcaagatcaatttaataatcaagacaaattgagctcccagttcagtgcaaaagctcaggtatcttgaggataaaagagtatcaatgggctgtcttctaagctctcttgttctgcatatgtgccaatatattttttttttacaattattgtgctgaactttttctcacctgctcctaactcctaagcttgttgttgtgccatatatattgttggtagaaaattgttccatcgagggggcaatatacgcttgtgatgggtgcacattatcatatacctggttgcaagtagtgattgatattgtggcaattcttgcatttatgaattacatcatagcaacgcaatgatgtatggactttatggctttatctaattctagtcctttggaggcaattagacatctgtcaatgcaccaagtgaaatgattgcttcaaattcatactataattttggcatgtataattacgaattactagaatgtttgctttggtggctgtatgctgatgctgcataagtaaagctacatgcaaaagtaatctgatcattttgatttgatacacgacaattatctaacattctcattcgtggtaaacatcaggttggtccggctcctgctcttgtcaaggctgaagtcccttggtcaatccagagaggcaatctctccaacaaagaaagagttctgaaaacagtgaaagggtattgtttgatttgtatcatccttcctcatcatttttatattttcatatttaggaaatataatttatttactctttttcgtctagtccctaatgtgctgttttagacatacctgcagccaaaccttttgaatgttgagcactaatgcttctttaaatattttgatttgacacatgaaacttgtggagaactcactatatcgagctttattgatgtcctttaatagaaattagttgtcatagttttgcttttgggactgtactgatgtccaaagcggtatttatttgtggctggagagagtaaccaaacattatgttttttcttgcatatatttatttgttatttgtttcacagtatactgaacaaattgactccagaaaagtttgatcttcttaagggccagttaattgaagcagggatcactacagctgatattttgaaggtatgttcttgttgttcattcaactggctttgcctttcgacagttccttgtgatttacatctggtctgtttttgtttcaggatgttattagtctcatatttgagaaggctgttcttgagcctaccttctgtccaatgtatgctcagctttgctttgatctcaatgagaagttaccctcattcccttctgaagaacctggtggtaaagagatcacgttcaaacgtgtgctgttgaacaattgccaagaagcatttgaaggtgctgacaatctgcggtctgaggtcaataaattgactggtctagaccaagagatggagagacgtgataaagaaaggctagtgaagcttcggacacttggaaacattcgtcttgttggtgagctacttaagcaaaaaatggtccctgagaagatagtacatcacattgttcaggtgcgcatgcaatctttcgcgtttagttgaatataccatcaaatgaaaatcattaagtcaagaatacgcatgtgccagaagtgcacctaatcgggatgttaagactgactttttatcagtttgtttgaacacccttcatttgatgacacaagacatccttgtttgcactttacagacctattgatttacctatcaactaaatattttcttacccattttctgtaaacaggagctattaggttctgaaagcaacagatgccctgctgaggaaaatgtggaggccatctgtcagttcttcaacacaattggtaaacagttggatgagaatccaaagtctcgacgatttaatgacgtatacttcaaccggctgaaggatctaacaactaattctcagttggcatcacgattgaggttcatggcacgcgatgtccttgatcttcgttcaaaccaatgggtgcctcgacgtgaagaggtacaggtcctcaacttctctttatatttgtattactctccagaatttttatctgcccagtactctctactagttgctaatagctatgcagtggttattaataacagaaatgaaaccaaattagattactaagaaccttcatatatatggtgagatactatgttgagtcttttgaatgcattgttttttggaaattgcccaagtattgccctggtaatatatacatggttacaccacaagagttagtcatgatggtctgtttcacacgcttacaatacttctacctgacattagttcacttcaagtcctatgtaccttttgcaatacaccgagtggcactcattctagtagtcactgagcatgataaacatttagatcttggattctgttttactgtttctatcaaagcaatatgatattattttgctatatgaattgctctgagattctgttaattctttctcagatgaaagctaagaaaatcagtgaaattcatagagaggcagaaaacaatcttggattgcgtccagggtcgactgcaagcataagaactggccgtactggtactggaggtggaggacccctttcaccaggagctttttctatgaaccaacctggtatagttggcatgttgcctggtatgcctggagcgagaaagatgcctggaatgccagggctaggtagtgatgactgggaagttccgcattctagatcaaagcccagagctgatccagttcggaacctcaccccatcattggccaataagccatcacctaataattccagactgcttcctcaaggcagtgcagcattaattagtggcaagacgagtgcacttgtgggcagtggtggcccactatcccatggtctggttgtcacaccatctcaaactacaggaccaccaaaatcactcatcccagctccatctgtagatcctatagttgagcaaccagctgctgcccccaagccaagctctacagagcttcagaagaagaccatatctcttcttaaggagtatttccacatacttcttctacatgaagcacaacagtgcattgaggagctgaagagtcctgattactacccagaagttgttaaagaagccatcaatcttgctcttgataaaggcaccaattccatcgatcctcttttgaggctgttggagcatctctacaacaagaatgttttcaaagcgactgacttggaaactggatgcttgctttacagttctcttcttgatgagcttgctattgaccttccaaaagctccagtacattttggtgaagttattgggcggctggtcttgtcacattgcctgagcatagaagtcgttgaggatactctaaagaaaattgaggacagtttctttcgtgctgcagtgtttgaagctatgatgaaaatcatgaaagcaaatccatcaggtcaggctatcttgggctcacatgttgctaagatcgacgcgtgcagcaaacttctatcctcggaataaatatttgtcgcaagtttgactaggccaacttctaccttattactgatgtcctaactgggaatgttacattggttatttgttactcggtagttggcaggttttgccctttcagttcgagaaactacaacactgaagttgaggaacagctttttgtgagctgtatttttttgcaaggtcagatgactgataatgaagtaaagaaaagctatagatttagctctgataacaccgtaacaatacctcgatggtggtttacgcggctactcctcttgtaacaggtactgctgcgtgttggcaagcatacttgttagcgttgggtacaactgagttcataatttagtcgaaagttgagatctgatgtaattcttccagccaatctcatgacaatttattcgagatttgtttggttcaatttaacctgtcaatgcagtcttatcttctcatctgaggctgtgaggtaggatatgggaattcgtactgtttgcatttcgcgctcttgcgtgtcatgaatctgatggcctcattgtttcgcttatttatgaaataagccaaacgatatatttgtaaacgaaagtagtttatgaataaagcaaatgttgaaaaatagacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0611500, RefSeq:Os02g0611500