Os02g0626600

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Revision as of 02:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0626600| Description = Phenylalanine ammonia-lyase family protein| Version = NM_001054018.2 GI:297599629 GeneID:4330037| Length = 2588 bp| ...")
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Gene Name

Os02g0626600

Description

Phenylalanine ammonia-lyase family protein

Version

NM_001054018.2 GI:297599629 GeneID:4330037

Length

2588 bp

Definition

Oryza sativa Japonica Group Os02g0626600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:25879688..25882275

Sequence Coding Region

25879991..25882132

Expression

GEO Profiles:Os02g0626600

Genome Context

<gbrowseImage1> name=NC_008395:25879688..25882275 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:25879688..25882275 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtgcgagaacggtcaggttgctgccgatggcatcaacggcctctgcatggcggcgccccgcgccgacccgctgaactgggggaaggcggcggaggagatgtcggggagccacctcgacgaggtgaagcgcatggtggccgagtaccgccagccgctggtaaagatcgagggcgccagcctgaggatcgcgcaggtcgccgcggtggccgcggccggcgaggccagggtcgagctcgacgagtcggcccgcgagcgcgtcaaggccagcagcgactgggtgatgaacagcatgatgaacggcacggacagctacggtgtcaccaccggcttcggcgccacgtcccacaggaggaccaaggaaggtggtgccctgcaaagagagctcatcaggttcctcaatgccggcgccttcggcacgggcacggacggccacgtcctgtccgccgaggccacgcgcgcggcgatgctcgtccgcatcaacactctcctccagggctactcaggcatccgcttcgagatcctcgaggcgattaccaagctgctcaatgccaacgtcacgccatgcctgccactcaggggcacggttaccgcgtccggcgacctggtcccgctctcctacattgccggcttggtcaccggccgcgagaactctgtcgcggtcgctcctgatggcagcaaggtgaacgccgctgaggcgtttaagattgctggcatccaaggtggcttcttcgagttgcagcccaaggaaggtctcgccatggtgaatggcactgccgtcggctctggacttgcctccacggtgctctttgaggcgaacattcttgctgtccttgccgaggtcctgtccgccgtgttctgcgaggtgatgaacggcaagccggagtacaccgaccacctgacacacaagctgaagcaccaccctggacagatcgaggctgctgccatcatggagcacatcttggaaggcagctcgtacatgaagctggcgaagaagctcggtgagctcgacccgttgatgaagccgaagcaagaccggtacgcgctccgcacgtcgccgcaatggcttggccctcagatcgaagttattcgtgcggccaccaagtccattgagcgcgagatcaactctgtcaatgacaacccactcattgatgtctcccgcgacaaggcgcttcatggtggtaacttccagggcactcccatcggtgtgtccatggacaacactcgcctcgcaattgctgccatcggcaagctcatgttcgcgcagttctcagagcttgtgaacgactactacaacaacggccttccctccaacctgtccggcgggcgcaacccgagcttggattacggcttcaagggcgccgagatcgccatggcttcgtactgctccgagttgcagttcttgggcaacccagtgaccaaccacgtccagagcgcggagcagcacaaccaggacgtcaactccctcggcctcatctcctccaggaagacagccgaggccgtcgaaatcctgaagctcatgtcctccacgttcttggtcgccctgtgccaggccatcgacctgcggcaaatcgaggagaacgtcaagagcgccgtcaagagctgcgtcatgacagtggccaggaagactctgagcacgagcgccaccggcggtctccacgccgctcgcttctgcgagaaggatcttctccaggagatcgaccgcgaagccgtgttcgcgtacgccgacgacccgtgcagcgccaactacccgctgatgaagaagctccggaacgtgcttgtggagcgcgccctcgccaacggcgcggccgagttcaacgccgagacctcggtgttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgccagcggcggtgttggccgcacgggcagctgtggagaacggcacggcggcaacgcccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctcggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtggaacggcgcgcccctgcccatctgctaa</cdnaseq>

Protein Sequence

<aaseq>MACENGQVAADGINGLCMAAPRADPLNWGKAAEEMSGSHLDEVK RMVAEYRQPLVKIEGASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNG TDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDGHVLSAEATRAAMLVR INTLLQGYSGIRFEILEAITKLLNANVTPCLPLRGTVTASGDLVPLSYIAGLVTGREN SVAVAPDGSKVNAAEAFKIAGIQGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANIL AVLAEVLSAVFCEVMNGKPEYTDHLTHKLKHHPGQIEAAAIMEHILEGSSYMKLAKKL GELDPLMKPKQDRYALRTSPQWLGPQIEVIRAATKSIEREINSVNDNPLIDVSRDKAL HGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDYYNNGLPSNLSGGRNPSLDY GFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLM SSTFLVALCQAIDLRQIEENVKSAVKSCVMTVARKTLSTSATGGLHAARFCEKDLLQE IDREAVFAYADDPCSANYPLMKKLRNVLVERALANGAAEFNAETSVFAKVAQFEEELR AALPAAVLAARAAVENGTAATPNRITECRSYPLYRFVREELGTAYLTGEKTRSPGEEL NKVLVAINQGKHIDPLLECLKEWNGAPLPIC</aaseq>

Gene Sequence

<dnaseqindica>144..2285#aggaagagccacacatcccagttagctcttctccacagctctgaacacaccgctgcctgcatactcctctgatcaatctctctagtatcctcctgctcatttagcacaatcatcagttctctccggccgtctagctaactgcaatggcgtgcgagaacggtcaggttgctgccgatggcatcaacggcctctgcatggcggcgccccgcgccgacccgctgaactgggggaaggcggcggaggagatgtcggggagccacctcgacgaggtgaagcgcatggtggccgagtaccgccagccgctggtaaagatcgagggcgccagcctgaggatcgcgcaggtcgccgcggtggccgcggccggcgaggccagggtcgagctcgacgagtcggcccgcgagcgcgtcaaggccagcagcgactgggtgatgaacagcatgatgaacggcacggacagctacggtgtcaccaccggcttcggcgccacgtcccacaggaggaccaaggaaggtggtgccctgcaaagagagctcatcaggttcctcaatgccggcgccttcggcacgggcacggacggccacgtcctgtccgccgaggccacgcgcgcggcgatgctcgtccgcatcaacactctcctccagggctactcaggcatccgcttcgagatcctcgaggcgattaccaagctgctcaatgccaacgtcacgccatgcctgccactcaggggcacggttaccgcgtccggcgacctggtcccgctctcctacattgccggcttggtcaccggccgcgagaactctgtcgcggtcgctcctgatggcagcaaggtgaacgccgctgaggcgtttaagattgctggcatccaaggtggcttcttcgagttgcagcccaaggaaggtctcgccatggtgaatggcactgccgtcggctctggacttgcctccacggtgctctttgaggcgaacattcttgctgtccttgccgaggtcctgtccgccgtgttctgcgaggtgatgaacggcaagccggagtacaccgaccacctgacacacaagctgaagcaccaccctggacagatcgaggctgctgccatcatggagcacatcttggaaggcagctcgtacatgaagctggcgaagaagctcggtgagctcgacccgttgatgaagccgaagcaagaccggtacgcgctccgcacgtcgccgcaatggcttggccctcagatcgaagttattcgtgcggccaccaagtccattgagcgcgagatcaactctgtcaatgacaacccactcattgatgtctcccgcgacaaggcgcttcatggtggtaacttccagggcactcccatcggtgtgtccatggacaacactcgcctcgcaattgctgccatcggcaagctcatgttcgcgcagttctcagagcttgtgaacgactactacaacaacggccttccctccaacctgtccggcgggcgcaacccgagcttggattacggcttcaagggcgccgagatcgccatggcttcgtactgctccgagttgcagttcttgggcaacccagtgaccaaccacgtccagagcgcggagcagcacaaccaggacgtcaactccctcggcctcatctcctccaggaagacagccgaggccgtcgaaatcctgaagctcatgtcctccacgttcttggtcgccctgtgccaggccatcgacctgcggcaaatcgaggagaacgtcaagagcgccgtcaagagctgcgtcatgacagtggccaggaagactctgagcacgagcgccaccggcggtctccacgccgctcgcttctgcgagaaggatcttctccaggagatcgaccgcgaagccgtgttcgcgtacgccgacgacccgtgcagcgccaactacccgctgatgaagaagctccggaacgtgcttgtggagcgcgccctcgccaacggcgcggccgagttcaacgccgagacctcggtgttcgccaaggtcgcccagttcgaggaggagctccgcgcggcgctgccagcggcggtgttggccgcacgggcagctgtggagaacggcacggcggcaacgcccaacagaatcaccgagtgccgctcctacccactgtaccggtttgtgcgcgaggagctcggaaccgcgtacctcaccggcgagaagacgcggtcgcccggcgaggagctgaacaaggtgctcgtcgccatcaaccaaggcaagcacattgatccgctgcttgagtgtctcaaggagtggaacggcgcgcccctgcccatctgctaaacccctgtatcagaacctcacaggagatgatgagatgagtacagaggtggtggtttgtttcgagtagtgtggattataccagtacaagtagctgatcaaactttttttatacatttgttgtgttaaggattcttcaatgtacacctgcaataccacaacctggtagggaataacctggcaagcggctaaagtaattgttttgtaagttttgaagtataatttacgattctttttgtgtttggactagtaaacattttttcctgtttcaaatgctccggtagtgtatttaaaaacacaacttct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0626600, RefSeq:Os02g0626600