Os02g0638650

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0638650| Description = Pathogenesis-related transcriptional factor and ERF domain containing protein| Version = NM_001186163.1 GI:297721458 ...")
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Gene Name

Os02g0638650

Description

Pathogenesis-related transcriptional factor and ERF domain containing protein

Version

NM_001186163.1 GI:297721458 GeneID:9268771

Length

2030 bp

Definition

Oryza sativa Japonica Group Os02g0638650, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26482436..26484465

Sequence Coding Region

26482817..26484238

Expression

GEO Profiles:Os02g0638650

Genome Context

<gbrowseImage1> name=NC_008395:26482436..26484465 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26482436..26484465 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcggtggacagaggcggaggcggaggcggtggaggagcgcgcgggcacgggcggagatggaaggggaagggagtgagcgcggcgatctcctcctccgcggccgagacgcagcagccggtgccagttttagaagacgcgccggcggccgcagcattgctccgtccccagaagaagatccgcagccccgatcgtcgcctccagcgctccatctcctcgctgtcgtcggcccctgcttcccccgactcgtcctctgtctccaaccccatgtctcccccggcgatgtccttgccgaatcagccgccatcgtcgcgacatatatttccgttcgcgtacgatccgtctccgggcgcggcggcaccaaggctcctcccgctgctgcagtactccagcttgtacccgcagcctctgctgccgcagcagcaatcacccttgcagaatcagcaaatgatatcgttcggcagtagccagcagcagcagcagcagcagccgcagtttggggcggcgtctcctctgttcccgccgcagttcttgccgccggaggagcagcagcgcctgctgctgcgctactggagcgaggcgctgaacctgagccccccaggcgtgcgcggcggcgccctgccgccgtcgctgtaccagcacctgctgcgcgcgcctgggccgcccaaactgtaccgcggcgtgcggcagcgccactgggggaagtgggtggcggagatccgcctgccgcggaaccgcaccaggctgtggctcggcacgttcgacaccgccgaggacgcagccatggcgtacgaccgcgaggccttcaagctccgcggcgagaacgcgcggctcaacttccccgacctcttccttggcaaaggccgcaccggcgggagcggacgcaccagcgccagcgccgcggcctcctgctcctcctcctcctcttcggctccgcctacaccggacgagagccacacgcagcaagctcagccgcagccgcagcagcctacagaagagtcatccaacactgaaccgaagcctctgctcttcgtagcagagcaggacggcattccagaacccgagctgaatcctcagctccagacagctgaacaacatggcagcgacggcaacacggccatgttccagccgtcggtgacgtccggcggcatttggggtccggccgacgaggcgtggttcagcgcttgggggccaggaagctccgtctgggactacgacatggacagcgcccacggcctcctcctccagtctcgcttggccggtgagcagaccggcatggactacgcctacaccgcgccggaagtcctcgtggcaccggtgccggcggcagggacagccatggccactgccgcttcctcctctcttcctcctcgtcctccccctccttgccacagtccaaccttcgcatggaaggactaa</cdnaseq>

Protein Sequence

<aaseq>MDAVDRGGGGGGGGARGHGRRWKGKGVSAAISSSAAETQQPVPV LEDAPAAAALLRPQKKIRSPDRRLQRSISSLSSAPASPDSSSVSNPMSPPAMSLPNQP PSSRHIFPFAYDPSPGAAAPRLLPLLQYSSLYPQPLLPQQQSPLQNQQMISFGSSQQQ QQQQPQFGAASPLFPPQFLPPEEQQRLLLRYWSEALNLSPPGVRGGALPPSLYQHLLR APGPPKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGEN ARLNFPDLFLGKGRTGGSGRTSASAAASCSSSSSSAPPTPDESHTQQAQPQPQQPTEE SSNTEPKPLLFVAEQDGIPEPELNPQLQTAEQHGSDGNTAMFQPSVTSGGIWGPADEA WFSAWGPGSSVWDYDMDSAHGLLLQSRLAGEQTGMDYAYTAPEVLVAPVPAAGTAMAT AASSSLPPRPPPPCHSPTFAWKD</aaseq>

Gene Sequence

<dnaseqindica>228..1649#gaatcagaaccacgcgccccattggctcggcgcctccaccgcgcacacgcgcacaccggtcgcccgcccaaagcctttcccgccccgccgtctcgctcgttttaccgcagcattttgttgttgctctagcgggcggccgggtttactgcactcggtggaatcgcgaccggtggtgtgtgaggaagagagcgcgcggcgttgttgggtgtgttcgtgaatcgggcgggatggacgcggtggacagaggcggaggcggaggcggtggaggagcgcgcgggcacgggcggagatggaaggggaagggagtgagcgcggcgatctcctcctccgcggccgagacgcagcagccggtgccagttttagaagacgcgccggcggccgcagcattgctccgtccccagaagaagatccgcagccccgatcgtcgcctccagcgctccatctcctcgctgtcgtcggcccctgcttcccccgactcgtcctctgtctccaaccccatgtctcccccggcgatgtccttgccgaatcagccgccatcgtcgcgacatatatttccgttcgcgtacgatccgtctccgggcgcggcggcaccaaggctcctcccgctgctgcagtactccagcttgtacccgcagcctctgctgccgcagcagcaatcacccttgcagaatcagcaaatgatatcgttcggcagtagccagcagcagcagcagcagcagccgcagtttggggcggcgtctcctctgttcccgccgcagttcttgccgccggaggagcagcagcgcctgctgctgcgctactggagcgaggcgctgaacctgagccccccaggcgtgcgcggcggcgccctgccgccgtcgctgtaccagcacctgctgcgcgcgcctgggccgcccaaactgtaccgcggcgtgcggcagcgccactgggggaagtgggtggcggagatccgcctgccgcggaaccgcaccaggctgtggctcggcacgttcgacaccgccgaggacgcagccatggcgtacgaccgcgaggccttcaagctccgcggcgagaacgcgcggctcaacttccccgacctcttccttggcaaaggccgcaccggcgggagcggacgcaccagcgccagcgccgcggcctcctgctcctcctcctcctcttcggctccgcctacaccggacgagagccacacgcagcaagctcagccgcagccgcagcagcctacagaagagtcatccaacactgaaccgaagcctctgctcttcgtagcagagcaggacggcattccagaacccgagctgaatcctcagctccagacagctgaacaacatggcagcgacggcaacacggccatgttccagccgtcggtgacgtccggcggcatttggggtccggccgacgaggcgtggttcagcgcttgggggccaggaagctccgtctgggactacgacatggacagcgcccacggcctcctcctccagtctcgcttggccggtgagcagaccggcatggactacgcctacaccgcgccggaagtcctcgtggcaccggtgccggcggcagggacagccatggccactgccgcttcctcctctcttcctcctcgtcctccccctccttgccacagtccaaccttcgcatggaaggactaaacagcatcacacgccactcttacacgcaggaacacctaggttgtgagatgcacacaggttgcaaatttttgagacagcttgtggcatcgcacagtatgatcagcgatcacatcgcaggaatatctcaactcctcgagggcattcccattcccgaccttcctctctgaccaatctcctcctgaaaaccacaaggaaaaacccggctgcattttttaggctgggataaggatggccaaatattacaagcgtcatccttatcgatctttccatgatttttcaaagatggattcttttagacatttgactagctagtgatcgtatcagtgtctgtcacctgcaggatttgtagttgaatgtagcatgtaagggtttaaggattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0638650, RefSeq:Os02g0638650