Os02g0638900

From RiceWiki
Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0638900| Description = WD40-like domain containing protein| Version = NM_001054070.1 GI:115447510 GeneID:4330099| Length = 5644 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0638900

Description

WD40-like domain containing protein

Version

NM_001054070.1 GI:115447510 GeneID:4330099

Length

5644 bp

Definition

Oryza sativa Japonica Group Os02g0638900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26505983..26511626

Sequence Coding Region

26506357..26507430,26509373..26509463,26509546..26509703,26509799..26509850,26510496..26510560

Expression

GEO Profiles:Os02g0638900

Genome Context

<gbrowseImage1> name=NC_008395:26505983..26511626 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26505983..26511626 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcctctccggtgacccgtcgctcgcgcgattcgagaggggccgatcggctccatgcgacgccgtgggcccgctgccgtcctcgccggttgcgcggtccagatcgagcggcgccacgccggcatccgccgcgaaacccccgctcggaggaggccgcttgcgcggagcctcgtccgatgtgtcagatgccacgttggaggctgttgaggaggacccaaggtgcttgatcagaaacctcgacgacggcagcgagttcctggtgagagaggagttcggtctccgtgaggtcggtacggggcggcagctcaccatggaggagttcgagttgttcatcggccgctcacccatcgtccaagagctcatgcgccgccagagcgtggtcaattccaactcaaactccaattcccaaagtggcgcttccactcccattgagaggtccagctccggctccagcaatggtggggcgcgctacaagcggcgcaacagctggctccgcagcctccgcagtgcagctggctccatggttacatacactcgtgaccgccgcagcagcgacgagaaggatacatcctcagataagggtgggcatcgctccagctcggctacggatgacagccaagatggtgttgcaaaccatggcccggaccgtgttaaggttcggcagtatggtaaatcctataaggagctcagtggcttgttcatgaaccaggatataaaggcgcacagtgggtccatttggagcatcaagtttagtcctgatgggcactttctcgcaagtgctggtgaggattgtgtcatccatgtctgggaggtgttggagtggaagatgatagaggagaaggggttggaagaaaatggggtctttgatccagagtcgatgttggtatccacggcttcagagggaagccatcgggagaagaagctgcgggcaaaggcagtacacaatcagagatcagtaagctcagaccggttgatggtgccagaacatgtgtttgcactatcagagaaacccgtgataacctttgcagggcattctgaggatgtgcttgaccttagctggtccaaatctcagtacttgctttcatcttcaatggataaaactgtacggttgtggcacgtgtcaagcacttactgtttgaaaaccttctcccacagtgactatgtgacttgcatccagttcaatcctgttaatgataaatacttcattagtggttccctggataaaaaggttcgaatttggagtatacaagaacgcaaaattgttgactggattgatctgcatgaaatgatcacagctgcctgttatacccctgatggacagggtgcactcgttggctcccacaagggcaagtgccatgtctacgatatttctgtttgttccagggagttcttcaaaggtcatcatcacatctgcagattcacgaattcgagttattga</cdnaseq>

Protein Sequence

<aaseq>MGLSGDPSLARFERGRSAPCDAVGPLPSSPVARSRSSGATPASA AKPPLGGGRLRGASSDVSDATLEAVEEDPRCLIRNLDDGSEFLVREEFGLREVGTGRQ LTMEEFELFIGRSPIVQELMRRQSVVNSNSNSNSQSGASTPIERSSSGSSNGGARYKR RNSWLRSLRSAAGSMVTYTRDRRSSDEKDTSSDKGGHRSSSATDDSQDGVANHGPDRV KVRQYGKSYKELSGLFMNQDIKAHSGSIWSIKFSPDGHFLASAGEDCVIHVWEVLEWK MIEEKGLEENGVFDPESMLVSTASEGSHREKKLRAKAVHNQRSVSSDRLMVPEHVFAL SEKPVITFAGHSEDVLDLSWSKSQYLLSSSMDKTVRLWHVSSTYCLKTFSHSDYVTCI QFNPVNDKYFISGSLDKKVRIWSIQERKIVDWIDLHEMITAACYTPDGQGALVGSHKG KCHVYDISVCSREFFKGHHHICRFTNSSY</aaseq>

Gene Sequence

<dnaseqindica>375..1448#3391..3481#3564..3721#3817..3868#4514..4578#gtcctcttctcttctcccctcctcccacacctctcccctacctcgtctcatcgtgctcttcgcacccgcgcgattccgccccacgagcgccggcctccgcttcgatctccgcgacgggggccaatgccggcggcgcgatgagcgtggaggaggaggtggtgggggaggaggaggaggaggagctgttctacgagtcgctcgatcgcatcctctcgtcgtcgggctcctccacctcggcctcggacgacgatggggaccacccgcgccgccgccgcgggtacgacgcgggggcggcggccgcggccgcggcgctcgacctgtggacctccgagccggcgcccatccaggagcgacggcggcggctgctccagctgatgggcctctccggtgacccgtcgctcgcgcgattcgagaggggccgatcggctccatgcgacgccgtgggcccgctgccgtcctcgccggttgcgcggtccagatcgagcggcgccacgccggcatccgccgcgaaacccccgctcggaggaggccgcttgcgcggagcctcgtccgatgtgtcagatgccacgttggaggctgttgaggaggacccaaggtgcttgatcagaaacctcgacgacggcagcgagttcctggtgagagaggagttcggtctccgtgaggtcggtacggggcggcagctcaccatggaggagttcgagttgttcatcggccgctcacccatcgtccaagagctcatgcgccgccagagcgtggtcaattccaactcaaactccaattcccaaagtggcgcttccactcccattgagaggtccagctccggctccagcaatggtggggcgcgctacaagcggcgcaacagctggctccgcagcctccgcagtgcagctggctccatggttacatacactcgtgaccgccgcagcagcgacgagaaggatacatcctcagataagggtgggcatcgctccagctcggctacggatgacagccaagatggtgttgcaaaccatggcccggaccgtgttaaggttcggcagtatggtaaatcctataaggagctcagtggcttgttcatgaaccaggatataaaggcgcacagtgggtccatttggagcatcaagtttagtcctgatgggcactttctcgcaagtgctggtgaggattgtgtcatccatgtctgggaggtgttggagtggaagatgatagaggagaaggggttggaagaaaatggggtctttgatccagagtcgatgttggtatccacggcttcagagggaagccatcgggagaagaagctgcgggcaaaggcagtacacaatcagagatcagtaagctcagaccggttgatggtgccagaacatgtgtttgcactatcagagaaacccgtgataacctttgcagggcattctgaggatgtgcttgaccttagctggtccaaatctcaggtaacactcaaaatgctgctatatgcttgtcaattcgaatatgcaaatatttgttttttttggtatactcctgtgatacatactctgctggattgtagtatgtgtgccatcagacatcaggataatagtcacaataattaggtcttaactctttaaagttaaaaacttatgaagctattgccaaattagcagtaccaatgtctcatctaaccttgagaagtcatctagatctctggtatactgcaatgctactgaaaagggaaaaaaaggatgttggagatttgaacaaattggaattacacaaattgattgctcgcaatgttctgttattcgcaaataattctgttagatggttgtttataatacatcagtgcaattgtaccctttccaacctctaagtcatgttttataaagcatgcaacttttttgctgcttcatggtgacttaagtttttcatgttgagaacatctagaaaatccagcacctgttggtcaaaggataaaacattttgaatgtcagttcattcagttccatataactactaatctgttgatttaggtctctctttcactgcagtattaaaaacttttccattgataaatagattcaagttttttgatcatcaggtcaaaggagatattaagtttttcaatagattctgtagtctacagtgtactccaatcaacagaagatatttattccatcactaattagtatcacccagaagtgattgaatgtcatgagctaagtagctaactattttatgtgttgacatgacatgaggtcagtctttattgttcaaaggtgtgatttaatattcattatgtttttagtggagtttcaaaaggtgaaaaaaatagtgcacaagaatatttatgcacggttctttgaaaagaaatatgtccagcccccaaatgctagatgcatgattacagtgtataacttcagcaaattttgttaagcaacataaagagttaattgaagtttgtcgcctgccagattattgatgccaatctaccaagctagaagtcaatttcaatgtgttgttttaccttttgcattagacaagtgggcgcatatagtattaacgcagtaacattccttcaagatattgtatgacgttcataaggcttctgtatgctgttttaagctaccagtacatgacttgtgacatgctcttatactggtcccctaattaggtggacatttaacaggttgctgttgggtatgaaattattgctggtgggtttaatggagataaagttcatctagtactacaaacttaaagcgagtacaaatgggcatctcttcatgtaccttgtataaacttgtctgcctccaattctgcacaagaaatataaagtaggatagaagaggtctctcttggaaacagcattaaggtggatgtagctaattaagaattaaccatcttactgaaaaacttaaggccttaaactgttaaaaggtggacaatctacttatagtataaaacttgaactcagtccacatgcaaggccaatcaactctccaaggtttagaaatctaaacttatgttattgcttatcaggctccgtcactaaactttaggagtctctttggcagcaaaactccgtgctagtttggcagtctgttcaatttgtatttctgattatgtaggcctgtccaactatttattagtggaaataggttaaggagatgatttgtaccaaattttaacactagcatattccacctacaaatgttacgatggactcatttgtcttcaaagtgcagtttttcacaacccaaagctaaatttgtagctcagggacctcatcagacgttcatgaaagctttaagggtgtaggaatatattagcataattcattcattttattatgattttgttgtatttaacagttaccccagcaccccttatctccacttttcaatttctgtgcagtacttgctttcatcttcaatggataaaactgtacggttgtggcacgtgtcaagcacttactgtttgaaaaccttctcccacagtgactatggtaagagcatcgctttcaatagatcaatatctcttcctcaccccatgtattgtccttctctcatatcaatttcttgattcagtgacttgcatccagttcaatcctgttaatgataaatacttcattagtggttccctggataaaaaggttcgaatttggagtatacaagaacgcaaaattgttgactggattgatctgcatgaaatgatcacagctgcctgttatacccctgatggacaggtttaacttgcttcttgttctacaatttttcagcaggggtttgcttgctttttttcatgttcattcaaacaccttgttttttactctttgtgaagggtgcactcgttggctcccacaagggcaagtgccatgtctacgatatttctggtaaccctcctctctcattacttaattgctgcacatgtaatctcccacatctttaacttatttattccaagacctggtactgatagttggtactccctcctttccaaaaatataaacacatctagcatttgaaattcgtaccaatatttaagcatttctagcactttttagtattacttgtcccattaatcaccttcaattcaattttttcccatcttatttcttaccccccaagcatccctcatttactgggaggcactaaagtctcttgtccttaaccttattatgtactaaacaacctagaaatgcttatattttggaaacggagggagtatatgctatgttaagcttccatctactgccattgtcatattatataaattgcctcctataccttgcaaacttattttatttttgtcttttgcctagataatatgcttaagcacaagaaacagattgatctacatattaagaaaaggaaatctagccagaagaaaatcacaggaattcaggtgcttactctgaagtagcattttaaatatgatactacttgtagatcaatctgagtatgaatcaaatcgcaccagaattggtttttcattttacttgttttgtaccattacttattagtcgttcttcaaatagtttgttccagggagttcttcaaaggtcatcatcacatctgcagattcacgaattcgagttattgacagttttgaactagtttgcaaatttaaaggtaattagtgttgatcttattaatcctggccacactatttgttattaaatcgtctcgtattcagctggtggttgttttcatttccatgtttgtaactcatcttgtttcaggctttcgtaacaccaacagccaaatttctgcttgttcagctgtgaaagggagatatcttatctctgcaagtgaggattcccatgtatatatgtggagatgtaatgatgattccgaaccaaacacaaagaagggcattgtttctatcacaaatacccatgaacacttccactgcgagggtgtgacagttgctgtttcttggccttgtgccagcagcacaatgacatctagagaatggcctgagaatggcctgtctggatctgagcttgataaagatcaggagatgcctgatgctcagcaccagagcaacatcatcagaaacaccaacccaaatcataatggtgatacatctgcgacttggtctgaagaactcatgacaccaacaaaacagagcccgcggtctagtgccagccatcctatggagggagatcaagctccgagtcattcggcctggggcttggtgattgtcacagcaggccatgagggtcatatcagaacatttcagaacttcggctttcccgttagagtatagcatatggacctggatgctgagtcatcctgcaggagtgtagttttgtgtatagaatacacggaaatatatattcaatgagatgcacagcattgggttgggggattggatttggttgctccttggtgcgcctgcttcagaatttggaatcttcgactaacacatggtcagtactcaggtacttgtggtatgacattcattttagatattacctcaaattgtacatgaaagtgaatccctagaaagagtaatgctgtccgctggttggagtgacatctttcgccctcatcttcaacctttgctccacttttttttaatactccctactatgtattcttgtaaggggaaaaaaatcagtgctacagaaaagagatgcaaaagaaaattacgtattgtgggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0638900, RefSeq:Os02g0638900