Os02g0640700

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0640700| Description = UBX domain containing protein| Version = NM_001054083.1 GI:115447536 GeneID:4330112| Length = 1732 bp| Definition =...")
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Gene Name

Os02g0640700

Description

UBX domain containing protein

Version

NM_001054083.1 GI:115447536 GeneID:4330112

Length

1732 bp

Definition

Oryza sativa Japonica Group Os02g0640700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26617383..26619114

Sequence Coding Region

26617438..26619006

Expression

GEO Profiles:Os02g0640700

Genome Context

<gbrowseImage1> name=NC_008395:26617383..26619114 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26617383..26619114 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaacgccgctgccgtcgccaccttcatggagatcacctcctgcggatcccaggaggccgccgtgcagcacctcgcctcctgcaggtgggacctcgacgccgccctcaaccgctacttcatcttcggcggcgtgttggccgccgctcccgctcccgctccggtcgccgacgtcgcgccgcccgctgcgctggatgacggggtgcgcgctcccatccccgcccgctccgacacgctgtacggcgacatgtacggcggcgccaggcgccgtgaccgtgattcccgtcccgccccgtccgtttgggaggacgagccgccggcggtgacaccctcggtggcgccggtgtatatacagatgccatctgcgaatcccgcggtggcgccggtgcaaatacagatgccatctgagacggcggcctcggtgcccgctgcgccggtgcccgtacacgctccatctcagccccccgtggttgcaatcgccgtcaagaaagaacaaaacgagaaagacgaggaggaagacaacggccgcgacgacgacgacgacggctacagcgacagcgactacggcatggacacggacgacgacgacgaccgctacgacgagtgcatagagaaaacgccatctccaccacccaagtcgacgcagcaacaggcgacgacgctcgccgagatgtaccgccgcccgcgcgagctcatgcacgacgcggacttccacagcaccaaggtgcacgcggcgcgtcaggaccggtggctgctgctcaacctgcagtccgccggcgagtttgcgtcgcagatgcacaaccgggacctgtgggccgaccaggtgatcgcccgggtcgtgagagagagcttcgtcttctcgctgctcgagaacagttacggcgacgatgacgacgaggccagcaaagtttgctgcttctacaagctccatgaccagcttcccgccgtgctcgtcatcgaccccatcaccgggcagatgctggccaagtggagcggcgtcatccagcccgaaaccttcctggtggacatcgaagaatacagcaaatcgaagccgagcatgcgttccaaaccctatatattccaaagaaagcccatgccggtaaggtcagcacctgcagccagcgagcagcatcatcaagaaccggcaatggttgacactgctgcgcctatggatatccacaatgttcaagaaccagacactgctgcgcctgcacctgcacctgtggtcgaacacggtgttcaacaacctgcgactgccggcgccggcgcacagcaaccagcagatgaacaagatgatgatgaccagccgatggaaggtgagaagatgtacaggatgagggtacgattccccgatggctctgtggtcaccaaagagttcggctgcaagcggagggtggcagtgctcttcaattactgcagatcggtgctccatgacaagccgcaggcgttcaagatcaagaggttgctcggcgtcggcggagctttccacgagttgccccaaggtgaccactcgtttgaagatttgggcctgaactgcgcgactgtctcagtaattttggatacttag</cdnaseq>

Protein Sequence

<aaseq>MDNAAAVATFMEITSCGSQEAAVQHLASCRWDLDAALNRYFIFG GVLAAAPAPAPVADVAPPAALDDGVRAPIPARSDTLYGDMYGGARRRDRDSRPAPSVW EDEPPAVTPSVAPVYIQMPSANPAVAPVQIQMPSETAASVPAAPVPVHAPSQPPVVAI AVKKEQNEKDEEEDNGRDDDDDGYSDSDYGMDTDDDDDRYDECIEKTPSPPPKSTQQQ ATTLAEMYRRPRELMHDADFHSTKVHAARQDRWLLLNLQSAGEFASQMHNRDLWADQV IARVVRESFVFSLLENSYGDDDDEASKVCCFYKLHDQLPAVLVIDPITGQMLAKWSGV IQPETFLVDIEEYSKSKPSMRSKPYIFQRKPMPVRSAPAASEQHHQEPAMVDTAAPMD IHNVQEPDTAAPAPAPVVEHGVQQPATAGAGAQQPADEQDDDDQPMEGEKMYRMRVRF PDGSVVTKEFGCKRRVAVLFNYCRSVLHDKPQAFKIKRLLGVGGAFHELPQGDHSFED LGLNCATVSVILDT</aaseq>

Gene Sequence

<dnaseqindica>56..1624#acacgaaaccaacactcgtgcggccgtgcagttccaatctccgcgcctagcgaacatggacaacgccgctgccgtcgccaccttcatggagatcacctcctgcggatcccaggaggccgccgtgcagcacctcgcctcctgcaggtgggacctcgacgccgccctcaaccgctacttcatcttcggcggcgtgttggccgccgctcccgctcccgctccggtcgccgacgtcgcgccgcccgctgcgctggatgacggggtgcgcgctcccatccccgcccgctccgacacgctgtacggcgacatgtacggcggcgccaggcgccgtgaccgtgattcccgtcccgccccgtccgtttgggaggacgagccgccggcggtgacaccctcggtggcgccggtgtatatacagatgccatctgcgaatcccgcggtggcgccggtgcaaatacagatgccatctgagacggcggcctcggtgcccgctgcgccggtgcccgtacacgctccatctcagccccccgtggttgcaatcgccgtcaagaaagaacaaaacgagaaagacgaggaggaagacaacggccgcgacgacgacgacgacggctacagcgacagcgactacggcatggacacggacgacgacgacgaccgctacgacgagtgcatagagaaaacgccatctccaccacccaagtcgacgcagcaacaggcgacgacgctcgccgagatgtaccgccgcccgcgcgagctcatgcacgacgcggacttccacagcaccaaggtgcacgcggcgcgtcaggaccggtggctgctgctcaacctgcagtccgccggcgagtttgcgtcgcagatgcacaaccgggacctgtgggccgaccaggtgatcgcccgggtcgtgagagagagcttcgtcttctcgctgctcgagaacagttacggcgacgatgacgacgaggccagcaaagtttgctgcttctacaagctccatgaccagcttcccgccgtgctcgtcatcgaccccatcaccgggcagatgctggccaagtggagcggcgtcatccagcccgaaaccttcctggtggacatcgaagaatacagcaaatcgaagccgagcatgcgttccaaaccctatatattccaaagaaagcccatgccggtaaggtcagcacctgcagccagcgagcagcatcatcaagaaccggcaatggttgacactgctgcgcctatggatatccacaatgttcaagaaccagacactgctgcgcctgcacctgcacctgtggtcgaacacggtgttcaacaacctgcgactgccggcgccggcgcacagcaaccagcagatgaacaagatgatgatgaccagccgatggaaggtgagaagatgtacaggatgagggtacgattccccgatggctctgtggtcaccaaagagttcggctgcaagcggagggtggcagtgctcttcaattactgcagatcggtgctccatgacaagccgcaggcgttcaagatcaagaggttgctcggcgtcggcggagctttccacgagttgccccaaggtgaccactcgtttgaagatttgggcctgaactgcgcgactgtctcagtaattttggatacttagaacgaattactcctcctactactactatatggttcattggtccttgtatcagattctcggattcatcactatggagtagttgttaaatttagtgattgcttttgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0640700, RefSeq:Os02g0640700