Os02g0642600

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Revision as of 02:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0642600| Description = Hypothetical protein| Version = NM_001054091.2 GI:297599667 GeneID:4330127| Length = 7515 bp| Definition = Oryza sa...")
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Gene Name

Os02g0642600

Description

Hypothetical protein

Version

NM_001054091.2 GI:297599667 GeneID:4330127

Length

7515 bp

Definition

Oryza sativa Japonica Group Os02g0642600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26692912..26700426

Sequence Coding Region

26693094..26693210,26693295..26694821,26694964..26695701,26696080..26696287,26696823..26698777
,26699236..26699250

Expression

GEO Profiles:Os02g0642600

Genome Context

<gbrowseImage1> name=NC_008395:26692912..26700426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26692912..26700426 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaatccatttggatttcattgatattgagaccgacataaaaataagatatcaatctgatcttccagagtcagtgtatcaagtagaaaaggtccctgtaaaagacaatgatggcaatggccattcttctctgagagaagactgctgcttggagattgcagcactagatcatggtgcagtaatacctcgattggaagtaagtaggaattcttgggagctcgacgattgtctgactgagactgacagatacggtgtttttgataatgttgttagacacttggatgaagcacagattcagcattcagtgtttaaatcaaccgagttcttgagatcaactgacatggacatgctgacctttgtttgtgaagatgcaccatgccatgacattcaagtagataaaccagcagaaatcaaagctgcagtagaaatggatgttgtgaggatcaatggcaatattctgcttgagaaaaattcagcactctaccctctcaagcctgatggcacctgttcagacttgccttgctccattcttttagaggaggtacagatcattgattttccttcagataatgtattcaaaatgcttgttcagtcagagacaaataagatgaatatatctgatgaaatattcaaagatgattttgatccagcaagacgtttgtatgaatcaatggttagctgcgagttagcactggttgatgatacatttaggtcattgcctacacctattttaaatgatgatatagcagttaggtctagggtccctcccattcaagaaatactatgctccctaaaaccacaccctctatcagcatctgatggaatttatttggattggcatctcttactggaaggaccatgcaaccgggagatttgttgttcttatgcaagcatggttgaggaggcaaaaacttgccatttaagttctgagctgcaaaggagttgtcagagtacatcagtatttgttagcgattttctggaggattttcagagaagtccaaagcttcaagatgaggataaacatagcgatatttatgttcctgccccactgtctcatgatccacaaaaattggaagcaactcaaaaatgcgaacaagaaggtggtactagaaaccatagttccatgaaaagaccgagtccagaaaagtcatcttccttccctgagttaatatcacattctggtgacctaaatttttacttaaacgtcagaagtgccactaagagtggaaccaataatgagaatacttctactttagatgtcccgcattcagaagagcaagcattatctctttcaaccagggctaaggttgacaaactcatagaaattcatcctgtcagcccctcaaatcttattcaaggccttatagaacaaatccatgcaagctatacatctgctctgcaagaaagcacatattggaggcattctttctcagatgagcaaggtttaggaatctcaaagcagaaacttcttgaactgataacgggagaaggttcagaaggctcgtacaatcactgcgaacacaaagataagatggaactcattgtactgtatgcattaaagcaggttgcatattacttatgtttctttggtctgcatgcggcccatttgtacattagcaacctgactagaagcttggaaaacactcctgagaggttaaaacatattctatggtccatttctgaagcacagaggaaatctgagaggcaactgtttgaatctcatccgtcattgtcatgcattgagactatcctgagatctaataaacaaatcgaccaaaagatccttatagttgctgatagagctttctggctgccactgggtcaaaagctagcatccatgaggatgacatttgttgagtttggacaaaaccctgcaacaacttttgtggatctggtgaacaagacaaactctacagcttgggtgctggaagaattactgaaatcagattgcattctgctagataacaagaacattccagcttcattcccttttgacaagtttggcatcatactggaatatggaggcccgaataaatcatctaccttgttatctctcgctcctaaattagatggtttgccacctctgcatttcctctatgtcaaagttgatggcaaggactttccagctgctctagtcgaggacaaccataaagaccaggatttgaaatctacattggataaagttttgcttacacttcagaaggatttgcaggagaggatgaataaaatgcgtattgttgattcgttaaacttcataccagcaacaaatcaactgcaaggtcttcaagaaaaacggagcaaacattttgctgctgatgctacaaaagaactgcttccagatgatcaaccacacagattacaaaatcttaacaagaagaatacttttgattcacataacgttgtgcttgctgatgaacagctacatatacagcaaacactgagtaataaacctgttgtcaattcacaatgtgtacccacagttgagaagagtagctctacttcttctgtatctgccaatgtgctgaaagaccctcaagagaatcagtccactactgacttaccttcctgtgtgaaaaatgactgcatcatgccaggaagactgtccgtcccagatgtagtgatagttgtaaatactggaaatcatggaaagacgatgcttgtttcgcgaagatcatcttatcagcagatactagctctggagaaaggaggaatgcaggtcgtggagcgagatattgatctgcctgtggatctgatactcagtgctgctgtctgcctagtatggtatgagactgcgctctttgaggccaatgaactaacaacatcagcagagacatctggtataaaagaaaatgtagagaatattgcgaccaacattctgatgtcagttagtttctctttcactggctgcatcatgaacagtttccttgtacttttgcaggtctttgagggagaagctgacttcctttctgctgtaatggactcatctgattcattgtatactgcagctgctagtttggacatgaacttgcagctgttcttctcacacacacccaggtcaacagatgaaataattctcaattgcattacaaatgtgactagctgttataaagctcctcttccagatatacctgaatcagaaagcctggctgaatcatttctcacaagtttcccttccatcaatcccgtgtctgcatatatgttactttcttctggaggcagccttgtggagttcctcagttggccacatgagcgccgtattcaagcagttggaaagtatcttttgtctccaaagatcatttccctatttaatgctttgtgcaaatttggtgagttaggtgaatcaaggtctgtaatgactgaatgctcttcagtcgattcagatatcagtagtgcattcctgcagtctccgaggaaaaggaaacagcgttcattgcaggcttgtgcagtaccaactaataagctcctcttttctgattctctaaaccaaatacctggtgactatgcagaacatgctgaggtattctcaccttctaagttgaggaagttctctgacatggataatacaattcccgagctcccagatgtctttacattcgacgaaagtttgaatatgagaagtgagggattctcttatcaacaaaagaagcatgatgtggatgcaatacctggtaatcaagtcattaatgatgatttcagcaatggattgacaccaaataatcaagcatataacagaaggactggcaatatggtggacacattcgacttaccctggcaacctgaatttggtggtacgcatccaagcaaaagcacttttcacacaagcagaccatcttgcagcagaactcatagcaatccagtattttcaactgcatttgagatcaacgatgatcctggtgagtggaacatttcaggaggtacaaaacaaacatggaaggggcttgcacatggaggtactgtagacgactcttacagatatgatatggacaacagatatcatgaaccaagagatgaaattatgcaacatccagcaagttcgcttgcttttcagaaactagattttggtagccatgcaacttcacaggggtcatgctgggaaattgattatctaaggcaaatgagtgcaaagagaaaagcacgtcaggagagatctagatgtagtaattcaccaggtatgtcgatcccaagaatgagagatagcaactcaaagattctaaatcctccacctaaagaatccttcagataccgaggagatagagacactccttcgagggaccagagcccttcaattgggactcagcattatgggaaaggcaaggaaggagctaaagcacagaatcgcagagcaaggaaagatttcaatgtacaaccaacaagtcacaaaaagaggatagaaccgtccattgatccaacatggactcctattgacaagagagcaagacagaaactttcatttgttacatatgggaaggaaaaacagagcaagctggtctggcgaaaccagaacagccctggtgttgggtgtggcttccggaaaagattccgagaggaaggtacgtag</cdnaseq>

Protein Sequence

<aaseq>MKIHLDFIDIETDIKIRYQSDLPESVYQVEKVPVKDNDGNGHSS LREDCCLEIAALDHGAVIPRLEVSRNSWELDDCLTETDRYGVFDNVVRHLDEAQIQHS VFKSTEFLRSTDMDMLTFVCEDAPCHDIQVDKPAEIKAAVEMDVVRINGNILLEKNSA LYPLKPDGTCSDLPCSILLEEVQIIDFPSDNVFKMLVQSETNKMNISDEIFKDDFDPA RRLYESMVSCELALVDDTFRSLPTPILNDDIAVRSRVPPIQEILCSLKPHPLSASDGI YLDWHLLLEGPCNREICCSYASMVEEAKTCHLSSELQRSCQSTSVFVSDFLEDFQRSP KLQDEDKHSDIYVPAPLSHDPQKLEATQKCEQEGGTRNHSSMKRPSPEKSSSFPELIS HSGDLNFYLNVRSATKSGTNNENTSTLDVPHSEEQALSLSTRAKVDKLIEIHPVSPSN LIQGLIEQIHASYTSALQESTYWRHSFSDEQGLGISKQKLLELITGEGSEGSYNHCEH KDKMELIVLYALKQVAYYLCFFGLHAAHLYISNLTRSLENTPERLKHILWSISEAQRK SERQLFESHPSLSCIETILRSNKQIDQKILIVADRAFWLPLGQKLASMRMTFVEFGQN PATTFVDLVNKTNSTAWVLEELLKSDCILLDNKNIPASFPFDKFGIILEYGGPNKSST LLSLAPKLDGLPPLHFLYVKVDGKDFPAALVEDNHKDQDLKSTLDKVLLTLQKDLQER MNKMRIVDSLNFIPATNQLQGLQEKRSKHFAADATKELLPDDQPHRLQNLNKKNTFDS HNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSSSTSSVSANVLKDPQENQSTTDLPS CVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRSSYQQILALEKGGMQVVERDIDL PVDLILSAAVCLVWYETALFEANELTTSAETSGIKENVENIATNILMSVSFSFTGCIM NSFLVLLQVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRSTDEIILNCIT NVTSCYKAPLPDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFLSWPHERRIQ AVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDSDISSAFLQSPRKRKQRSLQ ACAVPTNKLLFSDSLNQIPGDYAEHAEVFSPSKLRKFSDMDNTIPELPDVFTFDESLN MRSEGFSYQQKKHDVDAIPGNQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLPWQPEF GGTHPSKSTFHTSRPSCSRTHSNPVFSTAFEINDDPGEWNISGGTKQTWKGLAHGGTV DDSYRYDMDNRYHEPRDEIMQHPASSLAFQKLDFGSHATSQGSCWEIDYLRQMSAKRK ARQERSRCSNSPGMSIPRMRDSNSKILNPPPKESFRYRGDRDTPSRDQSPSIGTQHYG KGKEGAKAQNRRARKDFNVQPTSHKKRIEPSIDPTWTPIDKRARQKLSFVTYGKEKQS KLVWRNQNSPGVGCGFRKRFREEGT</aaseq>

Gene Sequence

<dnaseqindica>7217..7333#5606..7132#4726..5463#4140..4347#1650..3604#1177..1191#agtagaacacacaaggcaatgcagcggaaacccaccgcaactccgcattccgcaagccaagatcaaaagttggcgtatcaaaacattttgaaaaccaaaaaattcgtcttcaacctcctgctcccctcgcttcgttctccgccgcgccattcgccatgaggacccgcttcctcgccaccgactacttcgcgccgtcctcctcctccgccgccggcaaagcgctagccctagagttcttcagcttcccctctctccccgtccccgcccttcctcccgatccccacttcctcccgttcacctccgccgacgaactcccagccgccacggtcgccgacgatggtctcggccctctccccatcgcctccgcgctctccgatttcctcgccgcggttatcccgcaggccctgcctgtgccgactgtgcccgcggccgacgaggtgagcgagccacctgcgaattcgggtttcgcgttctcgagtcgtgcggggcttggttgggggtggctcggggttgctgttgcttgctctgtgctgtttttggttgattgatatttctatgtgagaaaatcgtgtggcatctgtgagttgcaacagctcatctgctagattctgcttcacgcaggtattggacgacttcctgtacgacagaggcggatacggcgaggatttcagctcatgggagtttggtgcattcagaatccctaaggcaagtgaagtttttatgtttggattctgtaggctgaatttcctatggagcatttgcgaacacttttttgtttttctataggggtatggcgtgatcaaccgcgagaaggatgaaaagggggagggctctagatcagacggtctggagatctcctcagttatgaaggtgacatagtagttagtttgctagccttgtacatgctttgactgttcttagggaattgatgttcgatttatgcattatgtggtgctagaggtgggaacaattgaaggagcttagatttgaggttgtagaggtggatctcctaatggtgagcagcgtttcagtgatattggttgatattattatgttgtttccttttcaaattcaaactcgattgttctggtgtctaaggctttgcaagaagacattgcatcctttggtgaagaggagtctggtggtggtgtcacgttgttgcttcgtgttccagatatgaaaatccatttggtaactacatcatctcatcacaatatcaaataattcgctcctctatactcccaaaagatcaataatgcgcatggagctgcagttcagctatgggagacatatgaacatgttgtacttagagttaaatggttatgatacttccgttcttataccatgttgtatttcgattgtaatgcgcgcatcacccaaaatatatacttctacacaataacatgataagcggttatctcctaccttttgtgttaattgtggattcactagtaatatttgtatcctccctgtcatatttctgtattatgtaactatcactatcataccatcaaagttgcaaaaacataaatcagttgaagttgcttatgcctgctggtgaacatgttgatttgattcccttgtgttttattaactcaaacatattctttgatacatcatgctcacgttctcgtctctgtttctcacaggatttcattgatattgagaccgacataaaaataagatatcaatctgatcttccagagtcagtgtatcaagtagaaaaggtccctgtaaaagacaatgatggcaatggccattcttctctgagagaagactgctgcttggagattgcagcactagatcatggtgcagtaatacctcgattggaagtaagtaggaattcttgggagctcgacgattgtctgactgagactgacagatacggtgtttttgataatgttgttagacacttggatgaagcacagattcagcattcagtgtttaaatcaaccgagttcttgagatcaactgacatggacatgctgacctttgtttgtgaagatgcaccatgccatgacattcaagtagataaaccagcagaaatcaaagctgcagtagaaatggatgttgtgaggatcaatggcaatattctgcttgagaaaaattcagcactctaccctctcaagcctgatggcacctgttcagacttgccttgctccattcttttagaggaggtacagatcattgattttccttcagataatgtattcaaaatgcttgttcagtcagagacaaataagatgaatatatctgatgaaatattcaaagatgattttgatccagcaagacgtttgtatgaatcaatggttagctgcgagttagcactggttgatgatacatttaggtcattgcctacacctattttaaatgatgatatagcagttaggtctagggtccctcccattcaagaaatactatgctccctaaaaccacaccctctatcagcatctgatggaatttatttggattggcatctcttactggaaggaccatgcaaccgggagatttgttgttcttatgcaagcatggttgaggaggcaaaaacttgccatttaagttctgagctgcaaaggagttgtcagagtacatcagtatttgttagcgattttctggaggattttcagagaagtccaaagcttcaagatgaggataaacatagcgatatttatgttcctgccccactgtctcatgatccacaaaaattggaagcaactcaaaaatgcgaacaagaaggtggtactagaaaccatagttccatgaaaagaccgagtccagaaaagtcatcttccttccctgagttaatatcacattctggtgacctaaatttttacttaaacgtcagaagtgccactaagagtggaaccaataatgagaatacttctactttagatgtcccgcattcagaagagcaagcattatctctttcaaccagggctaaggttgacaaactcatagaaattcatcctgtcagcccctcaaatcttattcaaggccttatagaacaaatccatgcaagctatacatctgctctgcaagaaagcacatattggaggcattctttctcagatgagcaaggtttaggaatctcaaagcagaaacttcttgaactgataacgggagaaggttcagaaggctcgtacaatcactgcgaacacaaagataagatggaactcattgtactgtatgcattaaagcaggttgcatattacttatgtttctttggtctgcatgcggcccatttgtacattagcaacctgactagaagcttggaaaacactcctgagaggttaaaacatattctatggtccatttctgaagcacagaggaaatctgagaggcaactgtttgaatctcatccgtcattgtcatgcattgagactatcctgagatctaataaacaaatcgaccaaaagatccttatagttgctgatagagctttctggctgccactgggtcaaaagctagcatccatgaggatgacatttgttgagtttggacaaaaccctgcaacaacttttgtggatctggtgaacaagacaaactctacagcttgggtgctggaagaattactgaaatcagattgcattctgctagataacaagtaagtccatttgataaataaaccaagccaattttctttccaattccttgcttttcattttcttattacaaatcaacttcaacaagcagataggctggttcttgggggttagctagttatttgctgtacctttttctactgtacaagaattagtgcaggatttattgaattcattctggtgagctaaatgaatgtgttacattaacagtccctccatgtttgccacaactttcatttcttagtgcatggagtcatggacatattacaagacgatcatgtttttagaagtagcttgccctttaagaaggatcaattgccttgtgagccactgagtcatcttgcactggttgttcatattgttgatcaactgtggttagagtttagacatatttttggggtcttttttacaataacttaaatgtaccagaagttcattggctctttttgtcaaaaaaattgtttctatgcacagtttagtttttgcttgtctgatattaaatattatgccatatccattcttgtcatcattttgaaggaacattccagcttcattcccttttgacaagtttggcatcatactggaatatggaggcccgaataaatcatctaccttgttatctctcgctcctaaattagatggtttgccacctctgcatttcctctatgtcaaagttgatggcaaggactttccagctgctctagtcgaggacaaccataaagaccaggatttgaaatctacattggtgattatcactcactccatgctgccatttattctgttgtcatatgccaatcatgttgtttattattaagccagcctttgtatgtgttggggaggggggcactacatgaaaatttttatatcttgtacacacagctcattgtaatatgaaacacttagtctcagctctgtaatcataacttctatccattgtagttgagtacttcaattgagcatgagtttcctgcatgatcttgttagagggaaaaccatacaaatgagttttttccccacatatttgtttttgagggcctacacttagtaatagggcagtaggtgtttgtagcaaatgatcaacatggaacatcctaacttcctaagaatgcttcactatttgcaggataaagttttgcttacacttcagaaggatttgcaggagaggatgaataaaatgcgtattgttgattcgttaaacttcataccagcaacaaatcaactgcaaggtcttcaagaaaaacggagcaaacattttgctgctgatgctacaaaagaactgcttccagatgatcaaccacacagattacaaaatcttaacaagaagaatacttttgattcacataacgttgtgcttgctgatgaacagctacatatacagcaaacactgagtaataaacctgttgtcaattcacaatgtgtacccacagttgagaagagtagctctacttcttctgtatctgccaatgtgctgaaagaccctcaagagaatcagtccactactgacttaccttcctgtgtgaaaaatgactgcatcatgccaggaagactgtccgtcccagatgtagtgatagttgtaaatactggaaatcatggaaagacgatgcttgtttcgcgaagatcatcttatcagcagatactagctctggagaaaggaggaatgcaggtcgtggagcgagatattgatctgcctgtggatctgatactcagtgctgctgtctgcctagtatggtatgagactgcgctctttgaggccaatgaactaacaacatcagcagagacatctggtataaaagaaaatgtagagaatattgcgaccaacattctgatgtcagttagtttctctttcactggctgcatcatggtaattaattttgtatccctctagaagtatttactttttcgtatatagttagcatcacaggccattgctatgttattgatgcaaatgcacctgtctgttttggtttggtgtgaatgtgataattcttgatctatcataagagaacagtttccttgtacttttgcaggtctttgagggagaagctgacttcctttctgctgtaatggactcatctgattcattgtatactgcagctgctagtttggacatgaacttgcagctgttcttctcacacacacccaggtcaacagatgaaataattctcaattgcattacaaatgtgactagctgttataaagctcctcttccagatatacctgaatcagaaagcctggctgaatcatttctcacaagtttcccttccatcaatcccgtgtctgcatatatgttactttcttctggaggcagccttgtggagttcctcagttggccacatgagcgccgtattcaagcagttggaaagtatcttttgtctccaaagatcatttccctatttaatgctttgtgcaaatttggtgagttaggtgaatcaaggtctgtaatgactgaatgctcttcagtcgattcagatatcagtagtgcattcctgcagtctccgaggaaaaggaaacagcgttcattgcaggcttgtgcagtaccaactaataagctcctcttttctgattctctaaaccaaatacctggtgactatgcagaacatgctgaggtattctcaccttctaagttgaggaagttctctgacatggataatacaattcccgagctcccagatgtctttacattcgacgaaagtttgaatatgagaagtgagggattctcttatcaacaaaagaagcatgatgtggatgcaatacctggtaatcaagtcattaatgatgatttcagcaatggattgacaccaaataatcaagcatataacagaaggactggcaatatggtggacacattcgacttaccctggcaacctgaatttggtggtacgcatccaagcaaaagcacttttcacacaagcagaccatcttgcagcagaactcatagcaatccagtattttcaactgcatttgagatcaacgatgatcctggtgagtggaacatttcaggaggtacaaaacaaacatggaaggggcttgcacatggaggtactgtagacgactcttacagatatgatatggacaacagatatcatgaaccaagagatgaaattatgcaacatccagcaagttcgcttgcttttcagaaactagattttggtagccatgcaacttcacaggggtcatgctgggaaattgattatctaaggcaaatgagtgcaaagagaaaagcacgtcaggagagatctagatgtagtaattcaccaggtatgtcgatcccaagaatgagagatagcaactcaaagattctaaatcctccacctaaagaatccttcagataccgaggagatagagacactccttcgagggaccagagcccttcaattgggactcagcattatgggaaaggcaaggaaggagctaaagcacagaatcgcagagcaaggaaagatttcaatgtacaaccaacaagtcacaaaaagaggatagaaccgtccattgatccaacatggactcctattgacaagagagcaagacaggtacgtgctgaaacattttctgatattgtgaattttctagtgtttgagatgcaatgaagataaaacctgaataattttgtgcagaaactttcatttgttacatatgggaaggaaaaacagagcaagctggtctggcgaaaccagaacagccctggtgttgggtgtggcttccggaaaagattccgagaggaaggtacgtagattatcatgtcaggtcagataagctccctgtgccctatcctcaaatagatttcgagaggaaagtacgtagattttcatgtcaggtcagataagctccctgtccctgtatcctcaaatttaagttgctggtgttttattttgtaaagatattccatgaagatatgtctaaactcttaacttac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0642600, RefSeq:Os02g0642600