Os02g0653900

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Revision as of 02:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0653900| Description = Similar to Avr9/Cf-9 rapidly elicited protein 14 (Fragment)| Version = NM_001054142.1 GI:115447654 GeneID:4330182| L...")
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Gene Name

Os02g0653900

Description

Similar to Avr9/Cf-9 rapidly elicited protein 14 (Fragment)

Version

NM_001054142.1 GI:115447654 GeneID:4330182

Length

1961 bp

Definition

Oryza sativa Japonica Group Os02g0653900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:27266507..27268467

Sequence Coding Region

27266620..27268254

Expression

GEO Profiles:Os02g0653900

Genome Context

<gbrowseImage1> name=NC_008395:27266507..27268467 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:27266507..27268467 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaattgcagcagccgcggtcacctcgccaccggccgccgcgcaggtgcacggtgtcgtgccaaggcatgcctcgccgacgccacagcagcgggcggcgccgcggcgggagcagtcgccgctgaacccgagctcgcagtcgatccggtcggcctcctccggcaccgagctcgcaggttccgcggcgacggaggcctcccgggcgcacatcgccaaccttgaccgggttctcgggaagccaccgcaggtgccgaggccggcgagccacgcggcggcgagcaagcaggagcggcagcagcaggacggggagctggagccgctcaacgtcaggcacggcctgctcaacgcgctcaacctgtccttcttcgtgcccatgcccgggatgcgggcccgcaccgccgccgacgagcacatgtcgcctcgcagcctcatgcacatgcagcagctcctctccgccgactccccgcgcgcctcgccgaggagcaccatcgcgccgcgctggcgcagcctccacggggaagacggctgggccggcctcctcgacccgctcgactccgacctccgccgcgagctcctccgctacggcgacttcgtccaggcggcgtaccaggcgttccactcgctgcccaccgcgtcggcgaggcaccgcgggctcatgctccccgaccgctcctaccgcccgacgcggagcctcttcgccacctcggcgctgtccatgccgccgtgggcgaagcgccccaacacccccgagtggctcacgcagcagtccaactggatcggatacgtcgccgtgtgcgagtccgagcgggaggtcgcccgcatgggccgccgcgacatcgccatcgtgctgcgcgggacggccacctgcctcgagtgggcggagaacctgcgcgcctcgctcgtgcctctcgacggcgagagcggcgaaggcggcgggcaggaggagcccaaggtggcacggggattccggagcctgtacaagacggcaggggagaaggtgaagagcctctcggaggaggtcatgggcgaggtgcggcggctcatggagaagtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcggcgccctggcgctcctcgtggccgacgagatcgccaccaccgtccccgacgcgccgcccgtcgccgtggtctccttcggcgggcccaaggtcgggaacgccgcgttcgtggacaagctccagaagaacggcagggtgaacgtcctgcgcatcgtcaacgccggcgacatggtcaccaaggtgcccggcgtggcgccgcgcctgccgctcaccaaggagcagtaccagcacgtcggcgcggagctgcgcatcgacagcaagaactcgccgtgcctccgccccgacgccggcccggcgtgccgccacgacctggaggcgtacctgcacctcatcgacgggttcacggggacgggccgcccgttccggcacgacgcgcgccgcagcgtgatccggctgctgcagttgcagagggggaacgtgaagaaggagtacgtgaaccgcgcccgggagctcggcgtcgacccctcggcgccggtggacgtcggccggagcatggcgtacgggaactgcgccgtcgcgagcccctcctcgtga</cdnaseq>

Protein Sequence

<aaseq>MPIAAAAVTSPPAAAQVHGVVPRHASPTPQQRAAPRREQSPLNP SSQSIRSASSGTELAGSAATEASRAHIANLDRVLGKPPQVPRPASHAAASKQERQQQD GELEPLNVRHGLLNALNLSFFVPMPGMRARTAADEHMSPRSLMHMQQLLSADSPRASP RSTIAPRWRSLHGEDGWAGLLDPLDSDLRRELLRYGDFVQAAYQAFHSLPTASARHRG LMLPDRSYRPTRSLFATSALSMPPWAKRPNTPEWLTQQSNWIGYVAVCESEREVARMG RRDIAIVLRGTATCLEWAENLRASLVPLDGESGEGGGQEEPKVARGFRSLYKTAGEKV KSLSEEVMGEVRRLMEKYKGEELSITVVGHSLGGALALLVADEIATTVPDAPPVAVVS FGGPKVGNAAFVDKLQKNGRVNVLRIVNAGDMVTKVPGVAPRLPLTKEQYQHVGAELR IDSKNSPCLRPDAGPACRHDLEAYLHLIDGFTGTGRPFRHDARRSVIRLLQLQRGNVK KEYVNRARELGVDPSAPVDVGRSMAYGNCAVASPSS</aaseq>

Gene Sequence

<dnaseqindica>114..1748#gtagtcatctctcgctcgcacacaactaataaccaacgaaaccacgagcagcggctgatcggtaagcggtagtggtagtagtagtttcgtttgtacgttgacccaagcagcagatgccaattgcagcagccgcggtcacctcgccaccggccgccgcgcaggtgcacggtgtcgtgccaaggcatgcctcgccgacgccacagcagcgggcggcgccgcggcgggagcagtcgccgctgaacccgagctcgcagtcgatccggtcggcctcctccggcaccgagctcgcaggttccgcggcgacggaggcctcccgggcgcacatcgccaaccttgaccgggttctcgggaagccaccgcaggtgccgaggccggcgagccacgcggcggcgagcaagcaggagcggcagcagcaggacggggagctggagccgctcaacgtcaggcacggcctgctcaacgcgctcaacctgtccttcttcgtgcccatgcccgggatgcgggcccgcaccgccgccgacgagcacatgtcgcctcgcagcctcatgcacatgcagcagctcctctccgccgactccccgcgcgcctcgccgaggagcaccatcgcgccgcgctggcgcagcctccacggggaagacggctgggccggcctcctcgacccgctcgactccgacctccgccgcgagctcctccgctacggcgacttcgtccaggcggcgtaccaggcgttccactcgctgcccaccgcgtcggcgaggcaccgcgggctcatgctccccgaccgctcctaccgcccgacgcggagcctcttcgccacctcggcgctgtccatgccgccgtgggcgaagcgccccaacacccccgagtggctcacgcagcagtccaactggatcggatacgtcgccgtgtgcgagtccgagcgggaggtcgcccgcatgggccgccgcgacatcgccatcgtgctgcgcgggacggccacctgcctcgagtgggcggagaacctgcgcgcctcgctcgtgcctctcgacggcgagagcggcgaaggcggcgggcaggaggagcccaaggtggcacggggattccggagcctgtacaagacggcaggggagaaggtgaagagcctctcggaggaggtcatgggcgaggtgcggcggctcatggagaagtacaagggcgaggagctcagcatcacggtcgtcggccacagcctcggcggcgccctggcgctcctcgtggccgacgagatcgccaccaccgtccccgacgcgccgcccgtcgccgtggtctccttcggcgggcccaaggtcgggaacgccgcgttcgtggacaagctccagaagaacggcagggtgaacgtcctgcgcatcgtcaacgccggcgacatggtcaccaaggtgcccggcgtggcgccgcgcctgccgctcaccaaggagcagtaccagcacgtcggcgcggagctgcgcatcgacagcaagaactcgccgtgcctccgccccgacgccggcccggcgtgccgccacgacctggaggcgtacctgcacctcatcgacgggttcacggggacgggccgcccgttccggcacgacgcgcgccgcagcgtgatccggctgctgcagttgcagagggggaacgtgaagaaggagtacgtgaaccgcgcccgggagctcggcgtcgacccctcggcgccggtggacgtcggccggagcatggcgtacgggaactgcgccgtcgcgagcccctcctcgtgagacgacgagattgacgtcttcttccaagagcccttaattatgtaaatttttgtagaagcagaccaacaattctttcgttagtcaggggtgtcagcgggaaaaaagattttcccttgtcatttgacgtatgtatgtacagtacataaaaactattatacttgcaaaaaaaaggaaaaacattatgcaagtgaaagcttgttatatctttatcac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0653900, RefSeq:Os02g0653900