Os02g0676500

From RiceWiki
Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0676500| Description = Zinc finger, RING-type domain containing protein| Version = NM_001054260.1 GI:115447890 GeneID:4330304| Length = 404...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0676500

Description

Zinc finger, RING-type domain containing protein

Version

NM_001054260.1 GI:115447890 GeneID:4330304

Length

4047 bp

Definition

Oryza sativa Japonica Group Os02g0676500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28489444..28493490

Sequence Coding Region

28489444..28489668,28491757..28491854,28492968..28493184,28493398..28493490

Expression

GEO Profiles:Os02g0676500

Genome Context

<gbrowseImage1> name=NC_008395:28489444..28493490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28489444..28493490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggggtcggggctgaatctggtgaccacggtgatcggcttcgggatgagtgccaccttcatcgtcttcgtctgcgcgcgcctcatctgcggccgcgccgcgcgggccgacgccgaggccgacgccgccgagggcagggtcgcggccgcgcgggccatggcggctggccccgcgccgttcgacttcgacgtcgagttccgggccacggatctcgaccgcacgattgagcatacccgtagtggattggaaccttttgttgttgctgcaattcctacaatgaagtacagctacgaggccttccaatcaaaagatgatgcccagtgctccatatgtttaggtgaatacaatgagaaagagattctgcgcatcatgcccaaatgccgtcataattttcatctttcctgtatagatgtatggttacaaaagcaaactacttgtccgatatgccggatctcattgaaggacctacccagtggaaaacctgccgagtcccctgtccgtagtctccctcaactattcagccaccctgaaagctcaaaacgccgtgcgttcttccagcagcagggcagcacgtacacggctttggcacagaattgcaaggaatttgtttacgacaggactggattttag</cdnaseq>

Protein Sequence

<aaseq>MLGSGLNLVTTVIGFGMSATFIVFVCARLICGRAARADAEADAA EGRVAAARAMAAGPAPFDFDVEFRATDLDRTIEHTRSGLEPFVVAAIPTMKYSYEAFQ SKDDAQCSICLGEYNEKEILRIMPKCRHNFHLSCIDVWLQKQTTCPICRISLKDLPSG KPAESPVRSLPQLFSHPESSKRRAFFQQQGSTYTALAQNCKEFVYDRTGF</aaseq>

Gene Sequence

<dnaseqindica>1..225#2314..2411#3525..3741#3955..4047#atgctggggtcggggctgaatctggtgaccacggtgatcggcttcgggatgagtgccaccttcatcgtcttcgtctgcgcgcgcctcatctgcggccgcgccgcgcgggccgacgccgaggccgacgccgccgagggcagggtcgcggccgcgcgggccatggcggctggccccgcgccgttcgacttcgacgtcgagttccgggccacggatctcgaccgcacggtaagatttctgtgctctactccggtaataacatcatctagcgtttagctggttggcgtgggatggctctgtgcgcattgctgcgtggtgaattgttgatgctgtgccgcttgaattgctttttaacatgactccataagcgatgggtccaatagttcgcaatttctacgggtatggcaaccagttcacggaaatgacaaatcgccacgcctcacactgatttaatttgttccagcagtggaaaatctaaaaaaaaaaacgaatggttcctccatttacttccaattatctggatacaaattagacaacaattcaaggcttcaagcttgtttatgaatggctccttcatttgatttcagttataaccagggtttaatctttcggtttggacgtttctatcagagggtgctgatatactgaaattgcagaaatttcgttctgaaattttgaagacattttagtcaaagttgaataaaataattccaaattcacaaaaaaaaattcggccaaaataatatcattgggggggggggtccgatatgatcgaaatttcgttccggaattttgaaccctggatatacctggatacaaattagacaacaattcaatgcttcaaacttgtttagttgtgcatgacgtgcaaattctgttatatagcaattgagcaataaatgcacatcacactttaactcaggattgatgcatactatttgcaatgcaagctattctttctaacagaaagatagatgggcattgcctttttaaaacctaactaagcttcaaatgtggaaaaaatgcttgctccaaatgcgtctgaaaaatcctagtaacaatgaggtgataaaatggagaaggaaattatgtgtctgaattgagcaaggagtgataacttgggaaccaaaagtactactaatcctactaataaaaactattaacttgagtaaacatcgtaataaaaaagattttgtagttatattaaaaagagagagagaagacatggtcttgttccaaaataaatgcagttcgtgttggccatatagttatgccaaagatttcctttgctaatcaaaccagccatagaaatttcaagttacttaacataatgtaaacttgttttttcttctgatgtatgtctaatgcttggtcacaatataatcgagttgtcatagtgtattttttctcttggttgttgtgagagtgtctgaattactctcatcaccaatttatgtcaatatcacattattttctataactcaatagaagattagacatctgcgctgtctgtttcaactgtgaatatgacatgataggttaatatgtaatatatcacttcacaaacatgcaagttcaaattcgacttctacaagttataacaaaaagtcaaaaaataacaaatttgactgtgaatatacgtatactagttagagtttgatttgttatttttgttacaacttgtagaagtcgaatttgaacttgcatgtttgtgaagtgatatattacatattaacctatcttgtgaatttttttggaattttttcataatcatttaggtggcatgcaagaaacgggtggacgtccacccaagagattagaatccatcctccatatataaagcatcttttatattgcttacggacaacctagaggcctaggaccagattcttgccagttttgtgcccattgatcacctttacagacatgctaacttccacttgttcatgacaataatattttcagtgagtagccttttgggaagataaacttctaatctattgagagttttgaattcttcatgcaaactatcgtagtattgtatatatattgataatataacaatattactgaaaagttacacaacaattaccagattccaaattccaaatgtaatggcacactaaggtgctcctgttgtatcttttgatgggctcccttttgtccttatttacttgttgcatcattcctaattagaaaatgatgcttgaactgctaaaatcagatatttgtaatactaaatggaaaaccactgtgctaattaggtatgtgcttgtgttcggaaattaacttggtcattcctttttttttcaatagattgagcatacccgtagtggattggaaccttttgttgttgctgcaattcctacaatgaagtacagctacgaggccttccaatcaaaagatgatgcccagtaagtgtactgtatactgtagagctacttacgtgcttccatcttttggtctcctgtctatcatgtttgcctgttctggattggcagcaaacttcatgaggtagtatctgcaactgtccagttacctgcatcaaactttctttgctctgctggaatgcctgtacagtttttcttttcgacaattgtcagtgaaattcactgaaaagaatattcaagaagtttgttagtgtgcataatatgttaatattagatgaacaattgcaaacaactccattccaaaaatgatgatccgatgctgatagcctgaaaaatatttcatatttaatattggtgatctcatgtgttgtgaagcatgtggtacagctggctaagaaactgaaatatgttggaacaactcaccagccagactagctctctagttgtgatttacaagctatatagcatactagtgcttttgggaacaagaattgcatgagctatctgttgttattcttttatcccatttttgaatggaggaaaggaaaacaagcagacctgataattgaacattgacccatgcttgctaatctaacatgactattgaagatagtgagcaatcaatcaaataaaactactggtagcctaaaaaaaacaccggtgaaattgatacagataatcatcagagtttttgtgtgtatgtgtgcttgtgtttcatgatgtatcggatatgcataacatgaattatgtgtggaaaagagggcagttgaatagaattatatttttgattaaaaacggtctctagcacttatttggtgaacagaatagcactggacctgcatatgcttcgctgtcttttcttttttatcttggatctgtgtcttcatggcaagaagttactttcttgtccaacagatatcatttgtaaccgagtcttccctgccaaaaaatggaataatcaagagaaaataccattttgtgttaggatttatattactgggctgactatcatgtcaaaaataatattactggttgatgattatggttccttatttgtgctgcgacatgctcggagaaagttaccatcttgcagaaataatgttataagctatttgaccttttttttttgtttaacaggtgctccatatgtttaggtgaatacaatgagaaagagattctgcgcatcatgcccaaatgccgtcataattttcatctttcctgtatagatgtatggttacaaaagcaaactacttgtccgatatgccggatctcattgaaggacctacccagtggaaaacctgccgagtcccctgtccgtagtctccctcaactattcagccaccctgaaagctcagtgagtcgatcacctcattggatacttcctatccatcgtgatcgtactggaggtagagaaagcagcccggcttcacaagaaacagtagaggtggtcattgaaatccaacaagaaatgcactgaggacatggatgtatagaggcgagatatcgatagaagttgatgaaactattttgtttttcggttgagcaacaaagatatcttctattgcagaaacgccgtgcgttcttccagcagcagggcagcacgtacacggctttggcacagaattgcaaggaatttgtttacgacaggactggattttag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0676500, RefSeq:Os02g0676500