Os02g0680600

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Revision as of 02:46, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0680600| Description = Similar to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-s...")
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Gene Name

Os02g0680600

Description

Similar to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor (EC 4.6.1.12) (MECPS) (MECDP-synthase)

Version

NM_001054276.1 GI:115447922 GeneID:4330320

Length

2014 bp

Definition

Oryza sativa Japonica Group Os02g0680600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28660358..28662371

Sequence Coding Region

28660495..28660728,28661650..28661780,28661902..28662364

Expression

GEO Profiles:Os02g0680600

Genome Context

<gbrowseImage1> name=NC_008395:28660358..28662371 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28660358..28662371 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgtctcgccttcgccttaccgcaaatacttcggggcttccggcgcacgcaaaaaaaccgcaggttttcttagcattccacagccgaaaaagcccccaaacaaaacagccaagcttgctcggtcgctgcgcgctatctcgcctcgcgacgacgccatggccaccgcctcctcactcttcctcgcctcccccgtcgccaccgcgccgacagcccgcgcccggtccacaccctcggcttcccctgcccggccgtccctgcgcctccggcggccgtcgacgttggccgcggccgcggtccaggccgagcaccagcccgcggtcgccgcggcgccgaagccgccggcactcccgttccgcgtcggccacggcttcgacctccaccgcctcgagccgggcctccccctcatcatcgggggcatcgacatcccccacgaccgcggctgcgacgcccactccgacggggacgtgctgctgcactgcgtggtggacgcgattctcggcgcgctcgggctgcctgacatcgggcagatcttcccggactccgacccccgttggaagggcgccgattcgtcggtgttcatgagggaagctgtgaaactgatgcatgaagctggctatgagctggggaacctagacgctacattgatcttgcagaaacccaaaattagcccattcaaggagacaatacggtctaacttgtgtgacttgctgggggcggatccatccgtcgtcaatctgaaggccaagacgcacgagaaagtcgacagtcttggtgaaaacaggagcatagctgctcacactgtagttcttctgatgcggaaatag</cdnaseq>

Protein Sequence

<aaseq>MLVSPSPYRKYFGASGARKKTAGFLSIPQPKKPPNKTAKLARSL RAISPRDDAMATASSLFLASPVATAPTARARSTPSASPARPSLRLRRPSTLAAAAVQA EHQPAVAAAPKPPALPFRVGHGFDLHRLEPGLPLIIGGIDIPHDRGCDAHSDGDVLLH CVVDAILGALGLPDIGQIFPDSDPRWKGADSSVFMREAVKLMHEAGYELGNLDATLIL QKPKISPFKETIRSNLCDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK</aaseq>

Gene Sequence

<dnaseqindica>1644..1877#592..722#8..470#gtgccagatgctcgtctcgccttcgccttaccgcaaatacttcggggcttccggcgcacgcaaaaaaaccgcaggttttcttagcattccacagccgaaaaagcccccaaacaaaacagccaagcttgctcggtcgctgcgcgctatctcgcctcgcgacgacgccatggccaccgcctcctcactcttcctcgcctcccccgtcgccaccgcgccgacagcccgcgcccggtccacaccctcggcttcccctgcccggccgtccctgcgcctccggcggccgtcgacgttggccgcggccgcggtccaggccgagcaccagcccgcggtcgccgcggcgccgaagccgccggcactcccgttccgcgtcggccacggcttcgacctccaccgcctcgagccgggcctccccctcatcatcgggggcatcgacatcccccacgaccgcggctgcgacgcccactccgacggtacgggcgcggtggtggtggtggtggtggtggctattgttgctgcttggttctcttctctatgtgcttccgcttccgctccttgactcgttccgtcgctggcctttctttgtgcgcgcaggggacgtgctgctgcactgcgtggtggacgcgattctcggcgcgctcgggctgcctgacatcgggcagatcttcccggactccgacccccgttggaagggcgccgattcgtcggtgttcatgagggaagctgtgagtttctcgagctctggaaccacttttcagttcattgttttaaggcaattcgattttgtttctgcaagcatgttagactatttgtgtgctattaggactgtttagacttttaggagtccatggaatgcttcacctaaacaaatttgctgaataaatttgcagtttcagatattattgaattcttatgtctagttaactagtttgcctacttgaattagagataggaaatcaagtttgaagtctagactccaaacatccaaagtgtctgtactcgcactctcgcaatgcggtgtgttgcattggtcaaaactaacgcaagtcctccccggaaaaggaagaatttccccttaatgttgttgttgtgggtggaggacagacagttcatttttaccattttatttgttgcatctgaaagaatgaaacaccataaacatcggcggctgcttctgtcttgattatgttagctcctgattgcataaggtgcacgtgagtctgactttcaaattaggtcttggactttttgtactctaccagggcaaaaggtattccacgttttagaatttgagcaaggtgcttatcatgtgcttggaatgctgactgcatgtttccccttggacttttggatggaaagtatccccatgctttagaatttcaactcaacatgtgatcatttctctacatgacctcatggaacattgagaactgaaattagcttatttcctctttgattttgcattaaacagcatttggtcctgtcttagtcatcaggcaattgtatagtgtattatccaactggcctgatatttcgtgtgcactttctctttggtgctatatcattaaagtcaaaacatatgctagttgatgcagctttaggtggcttcatctgtctctgatcatagtgcaaatgtgcaatttcaggtgaaactgatgcatgaagctggctatgagctggggaacctagacgctacattgatcttgcagaaacccaaaattagcccattcaaggagacaatacggtctaacttgtgtgacttgctgggggcggatccatccgtcgtcaatctgaaggccaagacgcacgagaaagtcgacagtcttggtgaaaacaggagcatagctgctcacactgtagttcttctgatgcggaaataggaaaatggaagtgtactacatattacaggaattgaattgtaacatagtgaacaaattgtccttatgtaagtggtttatcactgaaattttagggcaaaaacaataaaaccgagtgcaatgtaaaattttatgtgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0680600, RefSeq:Os02g0680600