Os02g0700400

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Revision as of 02:48, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0700400| Description = Similar to Alternative oxidase 1a (Fragment)| Version = NM_001054374.1 GI:115448118 GeneID:4330432| Length = 1394 bp...")
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Gene Name

Os02g0700400

Description

Similar to Alternative oxidase 1a (Fragment)

Version

NM_001054374.1 GI:115448118 GeneID:4330432

Length

1394 bp

Definition

Oryza sativa Japonica Group Os02g0700400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29699546..29700939

Sequence Coding Region

29699563..29699622,29699713..29700201,29700292..29700420,29700547..29700906

Expression

GEO Profiles:Os02g0700400

Genome Context

<gbrowseImage1> name=NC_008395:29699546..29700939 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29699546..29700939 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctcccgcgctgctggatcagtcctcctccgccacctctgcccccgagtctccagctcgacctctgcggctgcgcatgcgcatgcgcagcggcctccgttagccggcgccggcggagggggcgtggccttgtgggcgcgacttctgtccacctccgccgccgcggcgaaggaggagacggccgcgtccaaggagaacaccgggagcaccgccgccgcgaaggcggaggcgacgaaggccgccaaggaagggccggccagtgcgactgcgagtcccgtggcgagcagctactggggcatcgaggcgtcgaagctcgcgagcaaggacggcgtcgagtggaagtggtcttgcttcagaccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaaggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacatcttcttccagaggaggtacgggtgccgcgcgatgatgctggagacggtggcggcggtgccggggatggtgggcggcatgctgctgcacctccggtcgctccgccgcttcgagcacagcggcggctggatccgcgcgctgctggaggaggccgagaacgagcggatgcacctcatgaccttcatggaggtggccaagccgaggtggtacgagcgcgcgctcgtgctcgccgtccagggcgtcttcttcaacgcctacttcctcggctacctcctgtcccccaagctcgcgcaccgcgtcgtcggctacctcgaggaggaggccatccactcctacaccgagtacctcaaggacatcgaggccggcaagatcgagaacgtccccgcgccgccgatcgccatcgactactggcgcctccccgccggcgccacgctcaaggacgtcgtcgtcgtcgtccgcgccgacgaggcacaccaccgcgacgtcaaccacttcgcgtcggatgttcattttcaggggatggatctcaaggatatccctgccccgctcgattatcactga</cdnaseq>

Protein Sequence

<aaseq>MGSRAAGSVLLRHLCPRVSSSTSAAAHAHAQRPPLAGAGGGGVA LWARLLSTSAAAAKEETAASKENTGSTAAAKAEATKAAKEGPASATASPVASSYWGIE ASKLASKDGVEWKWSCFRPWETYSPDTTIDLKKHHEPKVLLDKVAYWTVKALRVPTDI FFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRRFEHSGGWIRALLEEAENERMHLM TFMEVAKPRWYERALVLAVQGVFFNAYFLGYLLSPKLAHRVVGYLEEEAIHSYTEYLK DIEAGKIENVPAPPIAIDYWRLPAGATLKDVVVVVRADEAHHRDVNHFASDVHFQGMD LKDIPAPLDYH</aaseq>

Gene Sequence

<dnaseqindica>1318..1377#739..1227#520..648#34..393#aagagcagagcagcgtctccacgatctccggcgatgggctcccgcgctgctggatcagtcctcctccgccacctctgcccccgagtctccagctcgacctctgcggctgcgcatgcgcatgcgcagcggcctccgttagccggcgccggcggagggggcgtggccttgtgggcgcgacttctgtccacctccgccgccgcggcgaaggaggagacggccgcgtccaaggagaacaccgggagcaccgccgccgcgaaggcggaggcgacgaaggccgccaaggaagggccggccagtgcgactgcgagtcccgtggcgagcagctactggggcatcgaggcgtcgaagctcgcgagcaaggacggcgtcgagtggaagtggtcttgcttcagagtaagaatcgatttatccatgatcctgcttaaagatcgcttcctctcttttttgctgttaatttaactaatctgaattcaatttgtgtaactgcgtcgatgaattaatgtgtttgctaatttgcagccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaaggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacatcttcttccaggtaaccaaccacaactaattttccatcaaagatcatgccaatctattttgctgatcgaaatggatgggaatcaatggaacgattttgcagaggaggtacgggtgccgcgcgatgatgctggagacggtggcggcggtgccggggatggtgggcggcatgctgctgcacctccggtcgctccgccgcttcgagcacagcggcggctggatccgcgcgctgctggaggaggccgagaacgagcggatgcacctcatgaccttcatggaggtggccaagccgaggtggtacgagcgcgcgctcgtgctcgccgtccagggcgtcttcttcaacgcctacttcctcggctacctcctgtcccccaagctcgcgcaccgcgtcgtcggctacctcgaggaggaggccatccactcctacaccgagtacctcaaggacatcgaggccggcaagatcgagaacgtccccgcgccgccgatcgccatcgactactggcgcctccccgccggcgccacgctcaaggacgtcgtcgtcgtcgtccgcgccgacgaggcacaccaccgcgacgtcaaccacttcgcgtcggtacgtgcgtgtgaattcctaagtttgctgtgggctttgtgtacggcttgtgatgactggattgttcttttgcttgtgatgtgcatgcaggatgttcattttcaggggatggatctcaaggatatccctgccccgctcgattatcactgaagaaatcttacggcggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0700400, RefSeq:Os02g0700400