Os02g0705300

From RiceWiki
Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0705300| Description = Tubby family protein| Version = NM_001054401.2 GI:297599813 GeneID:4330460| Length = 3020 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0705300

Description

Tubby family protein

Version

NM_001054401.2 GI:297599813 GeneID:4330460

Length

3020 bp

Definition

Oryza sativa Japonica Group Os02g0705300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:29995878..29998897

Sequence Coding Region

29996054..29996446,29996523..29996610,29997655..29997787,29997874..29998208,29998766..29998797

Expression

GEO Profiles:Os02g0705300

Genome Context

<gbrowseImage1> name=NC_008395:29995878..29998897 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:29995878..29998897 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctctgaagagcattgtgcgggagctgagggagatgagggacggcatcggcagcatgtcgaggcgagccgctgacgggcgcgccggcggcgggcgcggcggctcgcggcattcttggccggtcctgtggtcggagcagcagcagccgccgcagcagcagcagctgcagcgtcaggagcatcagcagcagcaggggcggtgggcgaacctgccgccggagctgctgctggacgtgatccagagggtggaggccagcgaggcgacgtggccggcgcggcggcaggtggtggcgtgcgccgccgtctgccgctcgtggcgcgaggtcaccaaggaggtggtgaagacgctcgaggagtgcggcaggatcaccttccccatctccctcaagcagccggggcctcgtgagcatccagtgcagtgctttgtgaggagggacagggcgacttccacctatctcctctacctggggctcagcccatctctacatggagaaaacgacaagcttttgcttgcagcacgcaagattaggcgtgcgaccaggacttcttttgtgatctcactggtctccaatgacttctctctatccagtagcacctatgttggtaaactgaaaccaaacttccttggcacaaagtttacaatctttgacagccagcctccttgcgatgctgtagtgttgccaaacaaccgaccaagcaaacgacatttcaagcaagtatcaccgcgattgccactaggcaattacaatgttgctacggtctcatatgagctcactgtcctacgtaatcgaggaccaaggagaatgcaatgcaccatgcactctataccggcattgtgtattcaggaaggtgggaaggccccaacccctaccggcatcatccactcacttgacgaacaagttcccgccttatcaactagcaaaggaaaggaaccagccatagaatttttgctattgtactattgttcttggaatgtttag</cdnaseq>

Protein Sequence

<aaseq>MSLKSIVRELREMRDGIGSMSRRAADGRAGGGRGGSRHSWPVLW SEQQQPPQQQQLQRQEHQQQQGRWANLPPELLLDVIQRVEASEATWPARRQVVACAAV CRSWREVTKEVVKTLEECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSP SLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDS QPPCDAVVLPNNRPSKRHFKQVSPRLPLGNYNVATVSYELTVLRNRGPRRMQCTMHSI PALCIQEGGKAPTPTGIIHSLDEQVPALSTSKGKEPAIEFLLLYYCSWNV</aaseq>

Gene Sequence

<dnaseqindica>177..569#646..733#1778..1910#1997..2331#2889..2920#tagatatggcagtgatgcggactactttatgaggtgtctcctgccatttttttttagagtagattcgtcagtaatggcggatcttgccatggagtagtagtagtagtagtagtagtagtagtagcagggggttccttcggtgatagcgaagggtgcttagccattaagcggcggcgatgtctctgaagagcattgtgcgggagctgagggagatgagggacggcatcggcagcatgtcgaggcgagccgctgacgggcgcgccggcggcgggcgcggcggctcgcggcattcttggccggtcctgtggtcggagcagcagcagccgccgcagcagcagcagctgcagcgtcaggagcatcagcagcagcaggggcggtgggcgaacctgccgccggagctgctgctggacgtgatccagagggtggaggccagcgaggcgacgtggccggcgcggcggcaggtggtggcgtgcgccgccgtctgccgctcgtggcgcgaggtcaccaaggaggtggtgaagacgctcgaggagtgcggcaggatcaccttccccatctccctcaagcaggtaacaaagcttctccgtctctccatgccggtgatagtttggatttctccatggttaactttgtggattgctgcagccggggcctcgtgagcatccagtgcagtgctttgtgaggagggacagggcgacttccacctatctcctctacctggggctcagcccatgtaagttaaatttacatctctgtttttggttgttgacaaaatatatggcttacaaatcttgttctactaccaatttataagagtatcatgtaccatcagtccatcagtattcagtactagtccagttcatctgcatcaagatgtgttgtttctgccatttgcaacagtgaaaaaccagaataagctgtttgaatgagttactaccattgttaattcggtttaccgaaatctgtgtcaggtaatgaattgtgttccttaaggctaaggttaggggaatgcaatctgctatgggtgtttcatatgcatagcaaattttcattatttacacgagcagatgttttctagtgcctgcatgtatatgaagattttgtttgtcctgcctgtctttgagcgctacattatgcaaaaattcaaccgcggaggagtactcagtgacaagaaaagataatgttcgccttttccgatcacatcagctgaactggttgctcctccagatcgagaaggaaaccaactgtgactaataaacatagagcctgtaaaggttgtttcaacgcacttggctacctcattaacacaagtctttgtagcgtagcaaatgtacaagatcctaagctgaacctaaccgttgaacgtgcggtgctttactattttccggaataggttagacaatatgtgcaggcaatccatgatatgcatgccattctgcagattcctattcactctagatgcataaatatctacttctaacccccctatctaccaggctgtgggtgcagtccacaacaaacttggtacgtatgctgtttagtacttcctctgtcccaaaatataagaacctaggatcgtgtccagattcgtagtactaggaaatgtctcatccgattcgaagttcttatattttgggacggagggagtaggatgtattataagggctaaatagctcatctcctgttttgaaaatttgaatagagctaatatggaactcagaatacggacaattaatgttgactacatcactaactattattctatttatgaatgcagctctacatggagaaaacgacaagcttttgcttgcagcacgcaagattaggcgtgcgaccaggacttcttttgtgatctcactggtctccaatgacttctctctatccagtagcacctatgttggtaaactgaagtaagcactttataatgttgactttaagtaatttggttattctcttacttctagaaagctcactcaaatttattcccctgtatcagaccaaacttccttggcacaaagtttacaatctttgacagccagcctccttgcgatgctgtagtgttgccaaacaaccgaccaagcaaacgacatttcaagcaagtatcaccgcgattgccactaggcaattacaatgttgctacggtctcatatgagctcactgtcctacgtaatcgaggaccaaggagaatgcaatgcaccatgcactctataccggcattgtgtattcaggaaggtgggaaggccccaacccctaccggcatcatccactcacttgacgaacaagttcccgccttatcaactagcaaaggaaaggaaccagccatagaattttcatcgacaagcctcagcgctgatttgtctggaccggtctgtacaaatgaagtgcctcttgttctgaagaacaaagctccccgctggcatgagcagctgcagtgctggtgcctcaacttccgagggcgtgttacagtagcatcagtcaagaacttccagctcgttgcctcagttgatccttcccttggtatccctgcggcagagcaggagaaggtcatcctccaatttgggaaaatcggaaaggatatattcacaatggattataggtacccgctctcggcgttccaggcatttgcgatctgcctgactagctttgacaccaaaccggcgtgcgaataactgaagaaaggtatcaaacctgtgtcttctctctatttagctcaggcagcgtctgattccgttggatgctgtaaaattctcggtcttgctatgccaaaatgagcctactcctgggggagacagtagctttgtcagatcaagatgaacaatggcatctatatcttggcaactggcaaaaccccaggaaagatttgagtgacaatgctgtaaccaacaaactgctattgtactattgttcttggaatgtttagcggtgaaatatcactgcgctatggataatatggacgctgttcatcgtgccctacctccttccttgatgctatttacagtgaggttggcgattatgatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0705300, RefSeq:Os02g0705300