Os02g0707900

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0707900| Description = Universal stress protein (Usp) family protein| Version = NM_001054414.1 GI:115448198 GeneID:4330472| Length = 5435 b...")
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Gene Name

Os02g0707900

Description

Universal stress protein (Usp) family protein

Version

NM_001054414.1 GI:115448198 GeneID:4330472

Length

5435 bp

Definition

Oryza sativa Japonica Group Os02g0707900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30146924..30152358

Sequence Coding Region

30147163..30147271,30149835..30149953,30150122..30150243,30152105..30152288

Expression

GEO Profiles:Os02g0707900

Genome Context

<gbrowseImage1> name=NC_008395:30146924..30152358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30146924..30152358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggtcgtcggagccgacgcgggtgatggtcgcggtgaacgagtcctcgatcaagggctacccgcacccctccatcagctgccgcgccgccttcgactggatgctctccaagctcgtccgctccaacgccgccggcttccacctcctcttcctccacgtccaggtccccgacgaggacggatttgatgatatggatagcatctatgcatctccaccagactttcagagaatgaaacagagagacaagataagagggcttcacttgctcgagcactttgtgaatcaatgccatcaactggagataaaatgtgaagcatggattaaacaaggggatccaaaggaagtcatctgcagcgaggtgaagagagttcaaccagatcttctagttgtgggaagtaggggccttggaccatttcagagggttttcgtgggcacagtgagcgagttctgtgttaagcatgccgactgtccagtcatcaccatcaaacggaaggccgatgaagcaccgcaggaccctgttgatgattga</cdnaseq>

Protein Sequence

<aaseq>MAGSSEPTRVMVAVNESSIKGYPHPSISCRAAFDWMLSKLVRSN AAGFHLLFLHVQVPDEDGFDDMDSIYASPPDFQRMKQRDKIRGLHLLEHFVNQCHQLE IKCEAWIKQGDPKEVICSEVKRVQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHADCPV ITIKRKADEAPQDPVDD</aaseq>

Gene Sequence

<dnaseqindica>5088..5196#2406..2524#2116..2237#71..254#aaaactcctgccccttcttcttcttcttcttgccgaggaagccaaagcagcgggagcaaagcggagcgcaatggcggggtcgtcggagccgacgcgggtgatggtcgcggtgaacgagtcctcgatcaagggctacccgcacccctccatcagctgccgcgccgccttcgactggatgctctccaagctcgtccgctccaacgccgccggcttccacctcctcttcctccacgtccaggtccccgacgaggacggtacgcgccgccctctctcccattgttctcgcgggaatccccccacacaccaccgaccgtggggtggtgggctgcttttgctttgctgttgctgcgtcttcgaggtgctcgatggaatgcctcggttctagctctttgcaatctcgtgattttggtggtagatcgtctccaagcgtatcctaggagttcgcaacactaaggtggttctgatcgatttactgtgtacaaattcattaaaactgctgcgacctgtgtggctgtggagtgttaggttcctctgacgagcgtggccgcgtgggttgtggacaaggtcctctgcgggggggggggggggggggctggtactatttcaggataaatcgatgctatgctgtttttaaggtcatacgtgttagtaggtggctattggcctatggtttggtagttggcacggtatctgaataagctctatcactaatgacaggtgcagaatcttttgccggacttattgagtgtttcatgaactccaaaggattatttccccaagtcaaatgaccatgatgatttagtatttaaattagttttgaccatttattttaaagtagctttgactgtttctggattctaagggcctttcgccagggcagaggcgggggtattttagtgtttaccagtaagttgaatatatgcaaagttcatatgatcttatcaaatatgtgcaggggtactgcgaggtgtaaaagaaaatatgattgatttgtcctctctgttgggtttaggactagcgaatgtggttggtcattctgcatacacactgttgttgttttttcctcggtgctcttttgaattgtacagatgtgacaaaatttgactgaatgtagaagctctttttgtcatcttatcataactggccttatgcttcttcgacttaatttgtattattactgctctactaggagaatgcttaataatgttacacatatagttcccatcatcagtcatcgatcctattgtgttgatgtgattttgcctatgcatatcttccatactttgatggaatagagctctgataaatcacagaatttgaagtcaatatcgtttttgaatcctttagatcatccacttgccacaaatagtatatttctgactcacttggttttctttaagtttgccagctaaatctgttgttttctcttttgagccactgtctagtactacactactacttattcatttctggtgttcaaggaaatgcttctgctgtgggaagatcaaactctctatgacctatttcccaagttattctattatccagttttgaggttgatggcccagtgccttgtatagaaacttgtcaattttgtttttctgcttccttttatttccattcagatgacacagtttcattgctccaaatgaatttgacctgaatactgctttctcatgttttttggaccacgatacacttaagctgatacctgaatttcagtacagggtgtccaaagcttaggcagcacttatcttaaaatcttcctttttgtattatcttacctatttttttgtttctttgctggagtgagatagtttctttgtctataaaagatctacccacaaacttcatcagtatgtgctgtattttatattacaaaccataatacaattatctcttatttttacaaagtctattgaagtaaacaaatctacagaagtcctgcattcctgcctttagatgttttgtcatgcttttggctcagttgatgttggtgtttagcccttatcattgagtgactttagttcccatgcaatgtgcccacttaaacagttgtatttttggataattattttttctatctaatcacccttttttttgtttaatcaaaaggatttgatgatatggatagcatctatgcatctccaccagactttcagagaatgaaacagagagacaagataagagggcttcacttgctcgagcactttgtgaatcaatgccatcaactggaggtaatcaaacctccatatttcttttcagtccttttcctgaggatggttaattgaaattggtcagcacacagaaaattaagtgtgttttcttgactattgcagactccaatagccaatagtactgatcttttttgtttaatgttctggcgtttgtctaattatttgcagataaaatgtgaagcatggattaaacaaggggatccaaaggaagtcatctgcagcgaggtgaagagagttcaaccagatcttctagttgtgggaagtaggggccttggaccatttcagaggtaatttatgtcaaaatgactgtgattgaacttgtcagcattttattttaaaagttatgcacatataagtattcttcattgtgtgttatgatggttgcgcacatacgacctccagtttcaaatataaatcgttttagacttgtgcacaagaaactcacatgactttgttacccttcatctatactaagttggaaatgatgagacatttatttgtgaggatgataccgttaatttggtagggcaaacatggaagttaagtggtaaagttgcatagaagttctaaagttgacttatatttaggaatcgggaaagagttagaaaggctaaaacagcttatacttggaattgaagggagtactttgataagatgatccatcactaggtgtgcattgtccaaactaagatataatactatgtgtttatttctaaaaattgtgctgaattgagcaagtaatacaggatgactgggggtgtttgaacaattgatttcatgctgtttgatatttctaacaagtgatggttgttaggatacagtcttttttctatttcattttctgtccattatgtgagggaaatggtattgtactctgaaggcgtacctactgttagtcgtgtcatagcatcttgcttgttttttttttttttttttggataagatttacacttcatatgtacaatatcttgccccttccatattgaacttgtgacatcttaaacagctattgtgttactatgctaggaaaaaagacaagcaacaattttccgaactcaaatttctgttgaaatccatgttggttacctaaaggatttataaaaataccttaagcacaataacactggttctttggagctggctgtaacatgattagtggagataaatcaagtatgacacgtactagattaactttgtgaactatttacactgtctcgttctgataagctgggttgcaatttaattctgtaccagatataacatacttgccaggttggcatgtattcccaactacaaaatggatatgtccaaacattacgtctttatctcgacttcctttttatgatataaacctgctattcctaaagctataatcatcagcatgagtataattagctttctgctgactttatcattttgagaactgaatggaccaaacaaacttaaaagttttttttttttgctactcccatgcagcatgtagtggaagcataggcccatatggaacgggtgaagaaaaaaaatgaaaatattggggaaaaacatatgaaactcataggttgtttacttgtttatgcctcactagaaaaaaatacacaattttggggtgaaagatacaaaggaaaaggatcatgagggccaacctcatgatagattggccttttgtttttaagccaatccataagaaatctaatggatttataggagctcacccttttataccggagtgccaaatcaaaatgtttctaataccttcaaaattcatccaaaaaatccttttgtttcaaacacccccgttttcaagaatacacaaaagatttgcagatcattgcattaagatgaaagtagtttacaaggaacctaaaccagtccaaatgttaaacatctagactaatcaaccagaaccgaaacacaacagatttagcgaactactgtactatgtatggcgctgtcatttctccttttggtcatagtggttctgatatcgtcccaaaagtcagtttctcaagtttgcaagttgattgtgcatgcagcgtgcatacttatttttatttttgtgagcatgcgtgtgtgcttgtgcctttgtaattatgaaaaaaagactttggtattcgtgcgctctagacaagatgttgccttgtaaatcaagcagcagtagagcgtgcctactgtggaaaaaagcctatggagtaaccctaatgataaacactcatttgatattttctttagaatgtcgcacttctaatagaaagactttatgattcagtggcctatacgggtagaactaataatatctccagcttgtgttgtagtcttgtacagttgtactatgaaatagctaaattttaggacagctggagcagttatctgtgcagaactaatcctgtaattcatagagaacatgataattttctgtgaccaatataaatcatgtagtttgaataaaatcttaccaagttgttgcttttttcccaattcaggaaatgaatgggatgtagtattgtagtacattttatctatgcaatgctatatgagactgaattggaagaaaaatatctacttatatagacttctactatcacacaagctatttgtttgcatcttcatgattttctgtttaatctacgaagaattgttagatcatttttttaacaagtacattgtacttctgtttttttttttggtagaagaattactacagaaacttatatgtgaatgagaacaacgtacacctgcatatcgaaaaatgtatattgctcattgatattctgtaacgtgttgtcttgaattgcgccatggttagtcctgttttacttgtactaatgactggtgctgttaatcgcgttgcagggttttcgtgggcacagtgagcgagttctgtgttaagcatgccgactgtccagtcatcaccatcaaacggaaggccgatgaagcaccgcaggaccctgttgatgattgatcccttcaatgtcatacttgagaatgagatattcttcactgctcaatgggtttaatgtacaaaatacaatatggtagtagtgcttggaactagtacaaatctttgcccagtccaccccaaaactagagtgaagatgaagaacactattgcgacaagaggttgtatcctatatgagatacatccaagtttgttatgaacctaagctaccttgatgatgaatcacgtactgggcttcgcag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0707900, RefSeq:Os02g0707900