Os02g0709000

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Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0709000| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001054421.2 GI:297599825 GeneID:4330480| Length = 204...")
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Gene Name

Os02g0709000

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001054421.2 GI:297599825 GeneID:4330480

Length

2042 bp

Definition

Oryza sativa Japonica Group Os02g0709000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30205492..30207533

Sequence Coding Region

30205492..30205526,30205914..30206065,30206177..30206310,30206406..30206575,30206828..30207016
,30207128..30207208,30207305..30207533

Expression

GEO Profiles:Os02g0709000

Genome Context

<gbrowseImage1> name=NC_008395:30205492..30207533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30205492..30207533 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagcaggagggagtcctcggagaccctgaggaacaaatgcgcggcgtgctacaggcagtacaaccggatggagcacctggtggagcacatgaaggtgtcgttccactccgcccacgagccccgctgcggcgtctgcgccaagcactgccgctccctcgagtccctccgcgagcacctcatcgggccgttgcccaaggtggagtgcgcgcgcgtgttcgcggcccgcggctgcagcatctgcctcaacctcttcgacagcgccgccgccgtcagataccaccgcgcctccacctgccagttcacccgcgccgccccgatgcccaggggtagctacggaggccgtgcggtggccatggcgtgtaagatggtcggaggaggaagcgatggctcgctcgacatctgcgcgagggtgtgcctgatcggagaggacgagaacgtcatcttccagacctatgtgaaacccaccacgaccgtcacaaactacaggtatgaaatgactgggataaggccggagtacttgagggacgcaatgccactgaagcttgtgcagaggaggatccaggacatcctgtgcaacggtgagccactatggaagatacggccaaggagctctgggagggcaaggatcctcgttggccatggcctggagcatgaacttgagcgcctgggactggaggatactgcaaagtacccaccactgatgaaaactagcaagctgagcaactccctaaagtaccttacacaggcatatcttgggtatgatatccacactggcattcaggatccctatgaagattgcgtggcagcgatgaggctgtacattaggatgagatcgcaagcccacccgagagactacgcctccggttcaggtgagacgcagaacaactacccagcctggaggcagagggagctagagaggatgagcccagaagaactcctggcactctcgggttcagattactactgttggtgcctggatttctga</cdnaseq>

Protein Sequence

<aaseq>MDSRRESSETLRNKCAACYRQYNRMEHLVEHMKVSFHSAHEPRC GVCAKHCRSLESLREHLIGPLPKVECARVFAARGCSICLNLFDSAAAVRYHRASTCQF TRAAPMPRGSYGGRAVAMACKMVGGGSDGSLDICARVCLIGEDENVIFQTYVKPTTTV TNYRYEMTGIRPEYLRDAMPLKLVQRRIQDILCNGEPLWKIRPRSSGRARILVGHGLE HELERLGLEDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIHTGIQDPYEDCVAAMRLYI RMRSQAHPRDYASGSGETQNNYPAWRQRELERMSPEELLALSGSDYYCWCLDF</aaseq>

Gene Sequence

<dnaseqindica>1..35#423..574#686..819#915..1084#1337..1525#1637..1717#1814..2042#atggacagcaggagggagtcctcggagaccctgaggtaagatggtcacaaactgaatgccattactacagtagtattgcaagatgagctgagcatgcaagactggtgtgtgatgaactagctaattaatcaagctttaatcatgcatggtagtacgttcttctcgtgctctaaacatcgagctagatatataggacccttttttttcttgtcctagctagttccattcaataccttgaatatgcatgtatatatgatactacatattctgcgcacgaatgaatgagtaccttttcaactttcttatcccctattgccggtgcaaagaatcagaatttcataaatgcgtgcatagtgcctcgctcgcgatattctaaagacgcgatcgaactcaatcgatgaatgaaaatgatgatctcgcaggaacaaatgcgcggcgtgctacaggcagtacaaccggatggagcacctggtggagcacatgaaggtgtcgttccactccgcccacgagccccgctgcggcgtctgcgccaagcactgccgctccctcgagtccctccgcgagcacctcatcggtgagtacacaagtagccgtttttaatttgctcggttgatgcaacgagctagtttttgtggagttttcgcgtggtatctgacggtttctcgcgtacgccgtgcgcatgcagggccgttgcccaaggtggagtgcgcgcgcgtgttcgcggcccgcggctgcagcatctgcctcaacctcttcgacagcgccgccgccgtcagataccaccgcgcctccacctgccagttcacccgcgccgccccggtatgtaatcccctctcacctcagttacactgcgcatgctagtttgcaaggcttgttgctgaatttgcccgtggttttcttgcgtttgcatgcagatgcccaggggtagctacggaggccgtgcggtggccatggcgtgtaagatggtcggaggaggaagcgatggctcgctcgacatctgcgcgagggtgtgcctgatcggagaggacgagaacgtcatcttccagacctatgtgaaacccaccacgaccgtcacaaactacaggtaaaatatataggagatgatccattattttattactgatgatgtttctgagtgttagctagtagtacaatttttagctgtcattgttcgcatgtgtagatctatcggaccagaaaagcagaaaagacataatggaaaaccgagcaataaacatactgctatagaaactagcagtagaaattaaaggcatagatcgatggatagttttatgagatgatgaatgaggggatgatttatgatgtttctgttcaggtatgaaatgactgggataaggccggagtacttgagggacgcaatgccactgaagcttgtgcagaggaggatccaggacatcctgtgcaacggtgagccactatggaagatacggccaaggagctctgggagggcaaggatcctcgttggccatggcctggagcatgaacttgagcgcctgggactggagtacccggcattcatgatcaggtcagcagcacaaggcaaattaatttgctgcaaattagaccttgccagtttctcccttgctgacacaatttatctctgcatttttttcagggatactgcaaagtacccaccactgatgaaaactagcaagctgagcaactccctaaagtaccttacacaggcatatcttgggtatgcaaacttgctaagtcagctgtacaatctctatagactcttagactttgcattattaatgttgaagatactatccttgaatccctattgcaggtatgatatccacactggcattcaggatccctatgaagattgcgtggcagcgatgaggctgtacattaggatgagatcgcaagcccacccgagagactacgcctccggttcaggtgagacgcagaacaactacccagcctggaggcagagggagctagagaggatgagcccagaagaactcctggcactctcgggttcagattactactgttggtgcctggatttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0709000, RefSeq:Os02g0709000