Os02g0713600

From RiceWiki
Revision as of 02:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0713600| Description = Zinc finger, BED-type predicted domain containing protein| Version = NM_001054448.1 GI:115448266 GeneID:4330507| Len...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0713600

Description

Zinc finger, BED-type predicted domain containing protein

Version

NM_001054448.1 GI:115448266 GeneID:4330507

Length

2819 bp

Definition

Oryza sativa Japonica Group Os02g0713600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30448980..30451798

Sequence Coding Region

30448980..30449023,30449288..30449458,30449881..30450237,30450307..30450334,30450430..30451075
,30451788..30451798

Expression

GEO Profiles:Os02g0713600

Genome Context

<gbrowseImage1> name=NC_008395:30448980..30451798 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30448980..30451798 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcgccttcaccactgctaagctccgacgacgatgcaagatctggttcctccaactccggtgcaaaggcctgcagtcggccgccgcaaccacctataaaaaggaccaccactaggcaaaaagccatcttgcaggagcaccttctgcttcgactaaggcaggagctccttctgctccaagaactccagaagcttcatcttccaccaacggcatttaccacgaattcaactgctggtactggttgtgggagtagcagccagcaagaatcacaatcacttccaccacaagcagagtctgttaatgattctgagccaatacaagttgaagatgatgagccagaagatgattctgagaattttggcacaaagaggaagcttacttctgttgtttggaaggatttcaagaaagtcaaagtctgtggtgatgtcaagactgaatgccttcattgccacaagcggcttggagggaagagcagcaatgggacttcacatctacatgaccatttgaaaatttgcacattgagaaagatcaagatggggccaaagacacttgcacaatcttcattgagtgaagaagaatgggcttttgctagtgaggctaaagagcaaattaggaagtgggctgtttgtggtgattctactatagaggaaatgtcagttgaaatgattcaaaagtttgataagtactggaaagatattcaagggccaatggggttggccaccattcttgatcctaggtttaagattgactatctccttgggttcattgaaaccatcactggtcagtcaagtgaagagtgtgcaacgaaagttgctgaggtgaaagacactctatatgatttgatggagtatgaagtggaagatgatgaggataacacggaatcttcagctcctccacttgtcaattctgatttattgtcttcaatcacagcacgtgttactagtaggacaccagcagcaatacgcgttaaatcagagctagacaggtacctagaggatgagttggtttcaattaatacagaaaactttaagattcttgattggtggaaagtggttgggacaagctttcctacattgaggaaggtagcacgagatatatttgctattcctgttagcactgttgcatctgaatctgcatttagcacaagtggaagggttcttagtgagcatcgtagccggcttacttcagaactcttggaggccttaatgtgctcacaagattggctgcaaaacaagtatcgagattgcttctga</cdnaseq>

Protein Sequence

<aaseq>MASPSPLLSSDDDARSGSSNSGAKACSRPPQPPIKRTTTRQKAI LQEHLLLRLRQELLLLQELQKLHLPPTAFTTNSTAGTGCGSSSQQESQSLPPQAESVN DSEPIQVEDDEPEDDSENFGTKRKLTSVVWKDFKKVKVCGDVKTECLHCHKRLGGKSS NGTSHLHDHLKICTLRKIKMGPKTLAQSSLSEEEWAFASEAKEQIRKWAVCGDSTIEE MSVEMIQKFDKYWKDIQGPMGLATILDPRFKIDYLLGFIETITGQSSEECATKVAEVK DTLYDLMEYEVEDDEDNTESSAPPLVNSDLLSSITARVTSRTPAAIRVKSELDRYLED ELVSINTENFKILDWWKVVGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLSEHR SRLTSELLEALMCSQDWLQNKYRDCF</aaseq>

Gene Sequence

<dnaseqindica>1..44#309..479#902..1258#1328..1355#1451..2096#2809..2819#atggcttcgccttcaccactgctaagctccgacgacgatgcaaggtgagcacatctagctgtcctactcccaactcagtacccctccctagacgcctaactacagtaccatatccccctccccctccactaaattcctcttccatggctacatcgttgtctcgttgagtcactaactcacgttcggcgatccacaataagggacgccaatgcggagttggaccagccatcgcatgctataagcgctgcagctgcagccacacctgccgttgtgcctgttgctggatctgccattgttcatgtgggcagatctggttcctccaactccggtgcaaaggcctgcagtcggccgccgcaaccacctataaaaaggaccaccactaggcaaaaagccatcttgcaggagcaccttctgcttcgactaaggcaggagctccttctgctccaagaactccagaagcttcatcttccaccaacggcgtgcgcttattcaaatccatggggttcgatttcacgctaaccctttatatattgtagcttcacttttgtaatcctaagttcctaacaatttagcatgtgcaatttattaatttgcagcttgcttgattttcttagatattgaatgttgtatttagagtatctgtagaaaattagatatctttacatgtatattgtatggttgtacattgaatgttgttaagttataaatatgttatgaacttaagtttttgaaattaaaggaatctgaatctgtgtagtgtagctcataaaaattttattattctataggctgtagcagatttcagtatgctttatgtgtagagattcttcatttcaagttttccaagattattctataggctgaaagatatattgatctatatttatttgtcaattgtcagatttaccacgaattcaactgctggtactggttgtgggagtagcagccagcaagaatcacaatcacttccaccacaagcagagtctgttaatgattctgagccaatacaagttgaagatgatgagccagaagatgattctgagaattttggcacaaagaggaagcttacttctgttgtttggaaggatttcaagaaagtcaaagtctgtggtgatgtcaagactgaatgccttcattgccacaagcggcttggagggaagagcagcaatgggacttcacatctacatgaccatttgaaaatttgcacattgagaaagatcaagatggggccaaagacacttgcacaatcttcattgaggttcaatattacatgagtatcctttatctattgttgaccatattggctttcgaagatttgtgctcctagtgaagaagaatgggcttttgctagtgaggtagttgataggctcaagttgtttaatgacatcactgcagtattttctggcacaaattatgtgacttccaatattcaactacttaaaatctgtaggctaaagagcaaattaggaagtgggctgtttgtggtgattctactatagaggaaatgtcagttgaaatgattcaaaagtttgataagtactggaaagatattcaagggccaatggggttggccaccattcttgatcctaggtttaagattgactatctccttgggttcattgaaaccatcactggtcagtcaagtgaagagtgtgcaacgaaagttgctgaggtgaaagacactctatatgatttgatggagtatgaagtggaagatgatgaggataacacggaatcttcagctcctccacttgtcaattctgatttattgtcttcaatcacagcacgtgttactagtaggacaccagcagcaatacgcgttaaatcagagctagacaggtacctagaggatgagttggtttcaattaatacagaaaactttaagattcttgattggtggaaagtggttgggacaagctttcctacattgaggaaggtagcacgagatatatttgctattcctgttagcactgttgcatctgaatctgcatttagcacaagtggaagggttcttagtgagcatcgtagccggcttacttcagaactcttggaggccttaatgtgctcacaagattggctgcaaaacaagtatcgaggtacatatgctgttttattcatacatcatgcttagcatagattttacaatgcaatggatgcaaaataattcttataattgttatcttgtagctgataacgaagaagcagcaagcttttggagttgccttcaagatatccaagatcggattgagctattctttcaacaacttaaaattagcaatcaaactcctaccgccattatttgttatatccttataaaatctatatacctaattaaaaaatatgtaaggattctgggcgtttttttcgtctgtcccacacgtgtagctaaatccgttttaatctgattaatagacggatcggacagttttcaatctactccaaaaccgaggtttatatactatatgtaagttccatgtaatctcgtagcacatatagtaatctgcctacatggttaacatcgaaagttttcatcccggcgaccagggttcgattcccaccttcctctcccgcattttttcacctattattgctagcactatgcctatgggctaatgggcccctcctagaataagtctactttccctccctcgtgtcaaatctcccgcattttttcacctattattgctggcactatgtctatgggcccatcctagaataagtctactttccttccctcgtgtcaaatcatattaccatgcacatcccattgctgaaaaataaaaagtattgcacctctttcttcaacagattgcttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0713600, RefSeq:Os02g0713600