Os02g0715200

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Revision as of 02:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0715200| Description = 3-beta hydroxysteroid dehydrogenase/isomerase domain containing protein| Version = NM_001054459.1 GI:115448288 GeneID...")
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Gene Name

Os02g0715200

Description

3-beta hydroxysteroid dehydrogenase/isomerase domain containing protein

Version

NM_001054459.1 GI:115448288 GeneID:4330519

Length

4275 bp

Definition

Oryza sativa Japonica Group Os02g0715200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30557607..30561881

Sequence Coding Region

30557627..30557816,30558235..30558577,30558843..30559114,30559650..30559846,30560242..30560676

Expression

GEO Profiles:Os02g0715200

Genome Context

<gbrowseImage1> name=NC_008395:30557607..30561881 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30557607..30561881 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatctgagcgagaacgaggggatcgagggcgtgcggttcgcggtgacgggcggccagggcttcgtcggctccgcactgtgcctcgagctgctccgccgcggcgcccgggaggtccgctccctcgacctccgcgcctcctccccctggtccgaccagctgctcggcgccggcgtccgcttcttccaaggggatgttagaaagaaggaagatgtggggaaggctttgcgcggtgtggactgtgttttccatctcgcttcgtatggcatgtcagggaaggaaatggtacaggctgggcgagccgacgaggtcaatataaatggtacatgcaatgtgctggacgcttgccacgagcatggtgttagaaggctcgtgtatgtaagcacgtataatgtggtttttggaggagagccgattgtcaatgggaacgaggcgctgccttatttccctgttgaagaccatgttgatgcctatgcgcgtagcaaatcaattgctgaacagttggtgctgaagagtaatggccggcaaactaagagtgataaaagcagtcgtctttatacatgctcaatacgtcccgccgctatctatggtccaggtgaagagcggcatcttccaaggatactatcccttgcgaagttgggattagcattcttcaagattggggatccaaatgtgaagtcagattgggtctatgtggataatcttgttcttgcactgatattggcaagcatgggacttttagatgatattcctgacaggaagggaattcctgtagctgctggtcaagcatatttcatatgtgatggatcgcctgtcaatacttttgaatttctcagtcctctatttcaaagtttggattacacagttccacgagttagaatggatacctcagttgctcttgccatctcaagattttttgtgttcatgtatacactactctatccatggttggatagtaaatggattcctcagcctcttctccttcctgctgaagtatacaaggtgggtgttacacactacttttcatatttgaaagctagagaggaaatcggctatgtacctatggtgagcccgcgagaaggattggctgcaactatttcctactggcaggagaggaagagaaaagaactagatggcccaaccatatttccttggctgtttgtaacaattggcatgctggcattgttttctgctgcttaccttccacccgtcggtccattgaaatgggtgcttgacctccatttatttgttttccgatcaaagttggtgattcggttagtctttgtgatagcaactgcattgcacgttggtgaagctgtttatgcttggttcttggcaaagaagtatgacccgaggaatgctacaggttggttttggcaaacattcatgctcgggttcttttctcttcggtatctgcttaagagaatgagagagtag</cdnaseq>

Protein Sequence

<aaseq>MHLSENEGIEGVRFAVTGGQGFVGSALCLELLRRGAREVRSLDL RASSPWSDQLLGAGVRFFQGDVRKKEDVGKALRGVDCVFHLASYGMSGKEMVQAGRAD EVNINGTCNVLDACHEHGVRRLVYVSTYNVVFGGEPIVNGNEALPYFPVEDHVDAYAR SKSIAEQLVLKSNGRQTKSDKSSRLYTCSIRPAAIYGPGEERHLPRILSLAKLGLAFF KIGDPNVKSDWVYVDNLVLALILASMGLLDDIPDRKGIPVAAGQAYFICDGSPVNTFE FLSPLFQSLDYTVPRVRMDTSVALAISRFFVFMYTLLYPWLDSKWIPQPLLLPAEVYK VGVTHYFSYLKAREEIGYVPMVSPREGLAATISYWQERKRKELDGPTIFPWLFVTIGM LALFSAAYLPPVGPLKWVLDLHLFVFRSKLVIRLVFVIATALHVGEAVYAWFLAKKYD PRNATGWFWQTFMLGFFSLRYLLKRMRE</aaseq>

Gene Sequence

<dnaseqindica>21..210#629..971#1237..1508#2044..2240#2636..3070#gcttggggggagagtcagagatgcatctgagcgagaacgaggggatcgagggcgtgcggttcgcggtgacgggcggccagggcttcgtcggctccgcactgtgcctcgagctgctccgccgcggcgcccgggaggtccgctccctcgacctccgcgcctcctccccctggtccgaccagctgctcggcgccggcgtccgcttcttccaaggtccgccatctcgagttcatcctcactacagtggttttggcttttccttcactgtaactgacgcggtcactgagttttttcttagaagtaagacgcactggagcgctagcgctgcgctgctttgcttggctatagttctacctccggatttgttgctaactagtgtgaaattggagtaaactactgcctctgtgctattagctagtacatatgttttggctcttggagtagttagggaatcttgaattttgttttctcaacacagtgacagtaagttagtaacaccaacaatacccatgatgtactgcgcataattgcctggttagcttgttaacttgtgtgtccattgcagtcggctctgcatttccgatgcacgaattaagttatcaaatacctgatcggtgaacctgtgttgcaggggatgttagaaagaaggaagatgtggggaaggctttgcgcggtgtggactgtgttttccatctcgcttcgtatggcatgtcagggaaggaaatggtacaggctgggcgagccgacgaggtcaatataaatggtacatgcaatgtgctggacgcttgccacgagcatggtgttagaaggctcgtgtatgtaagcacgtataatgtggtttttggaggagagccgattgtcaatgggaacgaggcgctgccttatttccctgttgaagaccatgttgatgcctatgcgcgtagcaaatcaattgctgaacagttggtgctgaagagtaatggccggcaaactaagtaagttgagccatttttgccatgattcttatgtctgcctcattgccatgtatatctgccacttacatacccttcatataattttgccgggtcggccgatacccttcatataatatcttcaaatgtgttgttttcacctatgatgagcgtattttctactttccatgtgtcaagatccaccaccaattatttcattttggcttgggacttaagttgaacattggtaatatacaggctgtcttactgatttgatgtttttatacaggagtgataaaagcagtcgtctttatacatgctcaatacgtcccgccgctatctatggtccaggtgaagagcggcatcttccaaggatactatcccttgcgaagttgggattagcattcttcaagattggggatccaaatgtgaagtcagattgggtctatgtggataatcttgttcttgcactgatattggcaagcatgggacttttagatgatattcctgacaggaagggaattcctgtagctgctggtcaagcatatttcatatgtgatggtaagtgcagttagcctgtagggcaactatattactggttaaccttttctgataccatggcactatgttctgaattttatttccatcttttgaataggagtgcagccatttttatttttgtcttgtcatattgataaatctgaactgttgaacactagactactaagctgaatgctaccataaaaaaacagtagtttacactcttgtgttctgcattggtgtctttgttgaggatatctattcaaaatgatttactgcatagctcgttttagctatttatttgttttgcttattctgaggttgaaaccttttttcttttagagggagttgaaatttttattgcttacagatcatacgtaatgagtctactggatgctctgttgaatatatttacattcaatactgaaccattactcctttagcaacttgagcaattacacttatattccttaccagaattgctcttaatgtttgttgtttgtaatttgaaagaaatgttgcattttcttaacaagaaactattggttgtttgcaggatcgcctgtcaatacttttgaatttctcagtcctctatttcaaagtttggattacacagttccacgagttagaatggatacctcagttgctcttgccatctcaagattttttgtgttcatgtatacactactctatccatggttggatagtaaatggattcctcagcctcttctccttcctgctgaagtatacaaggtcggcttatttatcatgttccaatgactttacctaatgtagtccattatggaaatatgcctttacactgttactatcttctcatgtgacggcaactctgttgttaatcatgatgagtgaggggtaataagatctaatttgtttggtaggagtttgaatcttgttaagcgtaatatagtgctaagatgtaatgatggatgtgcagtattgcttacagctattttatccttttttatatataaattaatcattttctgttgatctttagtaatttcttgactaggcaagtagaaatgtagaattacataattgcaattctatttttatagctgagtgggaataaacatgatgtcaaacccatagtcgaagctaatgttgatagttcgctgtgacaggtgggtgttacacactacttttcatatttgaaagctagagaggaaatcggctatgtacctatggtgagcccgcgagaaggattggctgcaactatttcctactggcaggagaggaagagaaaagaactagatggcccaaccatatttccttggctgtttgtaacaattggcatgctggcattgttttctgctgcttaccttccacccgtcggtccattgaaatgggtgcttgacctccatttatttgttttccgatcaaagttggtgattcggttagtctttgtgatagcaactgcattgcacgttggtgaagctgtttatgcttggttcttggcaaagaagtatgacccgaggaatgctacaggttggttttggcaaacattcatgctcgggttcttttctcttcggtatctgcttaagagaatgagagagtagatttgtgctgttattcccttcactttgtcaggaaatcttcaacagtaatttctagctgaaatgcctcagcatatgcacttttaactgctgtggaacttcatttttctgagtcatatgtgacttctgtcagtcttgagaagcagagtgtgcagaacccatggtcttctatgatagtaggtattcagccatggttttcgatcttgcatgaagccaaaccacacagcacattgttagagttgcagcttgtaccattagcttagatggcatttgttttgggactggagagaacaattgaacataatggagttgtaagttgtcattgttacaattggcatatgtttggaggctataccatactgtacctcctatgctttgaaactgaactataaatcaataattggaaagctgaacaaaagccagcttctcttgcctgtcagttacgtacatatacagcacaaaccctgtcttttgccaatgcagaactggagtactcttggattggtctttgttccttctctgcagctatctacctacctctgaactggaagtcccaagaactacaagcatattacagcctgatggcagagtgacgacaggtcagttaaactgcttccatgagaaaaatgagttgttgcaggcttgcagctgtgttgtgcccctccactcgtctgattcttctaccaacctcgcaaccaacctttgcccttcatttaataaaagccagtgtcggcggcgagaggaagcaaccgaatgaaaagaagaagaataggtgaggtgaggcccgagtgttattatcggagttggacttgtgaacgacttgtgaactgcagccgcgcaatccgtcgatttgtgtgtggctcgcgtgcttcttccagatcacatttcaggtcccttcggtttgactgtatgagatgatttttctgtcgaatgaattggcgtatgagataatttttctgtcgattgatttttcggtttgactgaatgggatgattgcacgttgccgcaaggaatatatggtgtaagtaaggtcaaagtcctctgatcttggaaagaattgggcagaaacatatcgtaggaacaaaacgtgacacacgcttgcatttgtgctgatgagaaatgtaggcatgcagtttcagtttttgcattgtactgatgagaatgatgtttgtgatggttgcaatggctggcatgtttgattgtttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0715200, RefSeq:Os02g0715200