Os02g0730400

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Revision as of 02:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0730400| Description = Conserved hypothetical protein| Version = NM_001054548.1 GI:115448466 GeneID:4330615| Length = 3950 bp| Definition ...")
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Gene Name

Os02g0730400

Description

Conserved hypothetical protein

Version

NM_001054548.1 GI:115448466 GeneID:4330615

Length

3950 bp

Definition

Oryza sativa Japonica Group Os02g0730400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31314649..31318598

Sequence Coding Region

31314788..31314893,31315003..31315083,31315179..31315355,31315997..31316167,31316607..31316816
,31317002..31317090,31317686..31318378

Expression

GEO Profiles:Os02g0730400

Genome Context

<gbrowseImage1> name=NC_008395:31314649..31318598 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31314649..31318598 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtggggggagaggcggcggccccgtggtggcggcgctgctgctggccgcgctcctcctcgccgccgtcgctccggcctccgcgtcgtcgtaccccgcaaaggtggtgagtgggttcctctccaacgcggcgtcgtcggtgatgaagcggctgtggtcgctcaaatccaccacgaagacaggaagcggagggaagtcgatggtgaagtacgagggcgggtacaccgtggagacggtcttcgacgggagcaagctggggatcgagccctacgcggtggaggtcacccagggcggcgagctgctcgtcatggactccatgaacagcaacatctacaggatcgccctgccgctgtctcgatatagcagaccaaagcttgtagctggttctccggaaggatttcctggtcatgttgatggaaggcctcgagaggccaggatgaaccatccaaagggatttacggtggacggcaggggtaacatttatgtggctgatgctatgaacatggctattagaaagatcagtgacacaggggttacaactattgctggggggaaatcaagcagaggagggcatgttgatggaccaagtgatgatgcaaaattttctactgattttgaagtccgctatattggcagtagctgctcccttttggtgattgacagaggaaaccaagcgattcgggagattcaactcaacttcgatgactgtgtatatcagtatgaagctggttttcctctaggagttgcggtgcttcttgctgctgcgttctttggctacatgctcgcgttgctccaacgcagggtattagggatggtgtcaacagaagatgaacctgagactcagactccactaaaagctagcattgcaagcatccctccataccagaagccgctaaaacaatctgtccgtccaccgttaatcccaaatgaggatgaatctgagaaacaagaggttgaagaggggttctttacctcaatcggtaaactcatcgtgggagccaaatcgtctgttgcagagatagttggtgcagccttttctagaaagaagcgtttaaacattcatcagcagcaggctagagtacgctcttggccggttcaagaaagctacgccatcccgcgggatgagacgcctccaccactggatacaagaactccaaccccacgcaagaactatgctttcatgtcaaaggagcccgaaaagatccaccacatccggcatggtcggtctcagttcaatggttggaacggagacgcacctcagcagcagcagcaacagcagcagcagcagcaaatacatcaccagcagtacttacagcatcataggcagtattcatcaggaccgcaaactttctatgagccaagctgtgaggcaacaaacgagattgtctttggagccgtgcaggaggtagacagcaagcgccgcgctgtggagatcaaacccatgaaccatggcgatccgcagtatgaccaagatgggttgcggcaccgcagcagctacaccggttacagcaacaactggtag</cdnaseq>

Protein Sequence

<aaseq>MEGGGRGGGPVVAALLLAALLLAAVAPASASSYPAKVVSGFLSN AASSVMKRLWSLKSTTKTGSGGKSMVKYEGGYTVETVFDGSKLGIEPYAVEVTQGGEL LVMDSMNSNIYRIALPLSRYSRPKLVAGSPEGFPGHVDGRPREARMNHPKGFTVDGRG NIYVADAMNMAIRKISDTGVTTIAGGKSSRGGHVDGPSDDAKFSTDFEVRYIGSSCSL LVIDRGNQAIREIQLNFDDCVYQYEAGFPLGVAVLLAAAFFGYMLALLQRRVLGMVST EDEPETQTPLKASIASIPPYQKPLKQSVRPPLIPNEDESEKQEVEEGFFTSIGKLIVG AKSSVAEIVGAAFSRKKRLNIHQQQARVRSWPVQESYAIPRDETPPPLDTRTPTPRKN YAFMSKEPEKIHHIRHGRSQFNGWNGDAPQQQQQQQQQQQIHHQQYLQHHRQYSSGPQ TFYEPSCEATNEIVFGAVQEVDSKRRAVEIKPMNHGDPQYDQDGLRHRSSYTGYSNNW </aaseq>

Gene Sequence

<dnaseqindica>140..245#355..435#531..707#1349..1519#1959..2168#2354..2442#3038..3730#ctgctcaagaaaagctcggattcttggcggtttcccccaccatttccccctcctcgatctgggcctcctccccgcaagcgtgcgcctcgcattcccaccgagcgtgcctacgtgctgcgctttgctgtgctgcgggaggatggagggtggggggagaggcggcggccccgtggtggcggcgctgctgctggccgcgctcctcctcgccgccgtcgctccggcctccgcgtcgtcgtaccccgcaagtgagtgaccacgcctgcagcctccccgggttcgttggcttcttcgctcctttgctgatggatgtgtgtgtgtgtgtgtgtgtttttttggggggttttgccattgcagaggtggtgagtgggttcctctccaacgcggcgtcgtcggtgatgaagcggctgtggtcgctcaaatccaccacgaagacaggtgattgctggaatctttctcgtgctcgtggcgtttctccccctgggttttggttgtttgaagcaatttttcgctctctgattgcgatggagcaggaagcggagggaagtcgatggtgaagtacgagggcgggtacaccgtggagacggtcttcgacgggagcaagctggggatcgagccctacgcggtggaggtcacccagggcggcgagctgctcgtcatggactccatgaacagcaacatctacaggatcgccctgccgctgtctcgatgtgagtgagcccctatcttcgctgccttcctaaattcggctggtggcaatgctagtgcccagtgggattctcgcgttctgccaattagatgcttgtctagtgtttggtaggggtgatgctgatgttgcgggttggttggtggtcatgaattttggtctgccttggtctatcgcttgattgcgatgtgtttgttagctttcagtttgcgattgcgatacttttttaagtgccttttggttggtttatttgtcttgattacccacaatttatgttcagccaacattttactatattgtagaagtggcgcaatctggttgagacaaccctttcaatagcctcatcaagatggcggcggcgctattgtattctagcattagaatgacaaccctgagacgttgatacttgaaagcctgactttcattaaacattgattaaacattgcgctttatggcttacacctaggacgatatcatgtgtgcatcttctgaggcaatgaaatggaaaatcatgtttcacgtagcagcaaattattttcagctacactgaatttcatccgatcttcgcatgtttcacatagcagcagattatttcagctacactgaatttcatccaatcttctgaaaatggaccaaacaatgcagatagcagaccaaagcttgtagctggttctccggaaggatttcctggtcatgttgatggaaggcctcgagaggccaggatgaaccatccaaagggatttacggtggacggcaggggtaacatttatgtggctgatgctatgaacatggctattagaaagatcagtgacacaggtaagctaaaatgtcctgtggtgggggtatttgcacatggttttgtctgttccctaagcatcctatgtctgccttttggtttttgctgggcctgtccaacatgtatttagcacttgcatccaaagtaacagatgagaagagtaaaccagccaggcaatatgaagataatatatttagtttgaggaaagcaaatctgcttagaccattatctctggaaaactgcaaggcataaatcttaattttgttcaaagcatttatttctttccaaacttatactcaggaaaaagatcctgacaacatttgctgatacatagacttgatgttaactgagtttgatttcttggtaaaattagaaaggcatgctgccatcatcatgcacatgtttgtctaatttgtagtaaacgggaaggtcttgacttggaagtgttctgacatttaggggttacaactattgctggggggaaatcaagcagaggagggcatgttgatggaccaagtgatgatgcaaaattttctactgattttgaagtccgctatattggcagtagctgctcccttttggtgattgacagaggaaaccaagcgattcgggagattcaactcaacttcgatgactgtgtatatcagtatgaagctggttttcctctaggtatatcttcatatcataccctgttcttgtttctatagactattattacttgacccataaaacctgatgttgaagcattcaatctgagtagatgtttaaatttagtttgtatctgagggaatgttgacctgtacaatacttgcaagttgcaaataactaattacatgtattttgtatactgacaggagttgcggtgcttcttgctgctgcgttctttggctacatgctcgcgttgctccaacgcagggtattagggatggtgtcaacagaagatgtaagtactaagtctcaacatgacagaatttaattggtagattgtcagagttagataataaggcaagggttaaagtggaccacagacctgctgtaaccgagcaggccagcacatgaatatgttgccatcagtcttttgttactcctggtactaatgtccatcagaccatcacccactggccccagtctgcttcctgcttccttactatgtccacacctaccccgattttaccgtctcatgtgaaaacacactgattgagtgttcttagtggaattggtgggtaaatgctagcagtagaagttttggagtatagttgctaattccggttaacattacacagaacagaaacttctacatatctagactagctgtaaaattacagctactacttgtttagtgatttgctcattgtgatagttgtataacacacacacacacacgccccctaaaaaaaccctagtaattctttatttttgtgctagctttctcatggtgctaggcttgacaagattagtacttgtccgcatacactatctcatgtgttcttgcagacaactggagctacattgttttgaattcaatttttaccacgcaggaacctgagactcagactccactaaaagctagcattgcaagcatccctccataccagaagccgctaaaacaatctgtccgtccaccgttaatcccaaatgaggatgaatctgagaaacaagaggttgaagaggggttctttacctcaatcggtaaactcatcgtgggagccaaatcgtctgttgcagagatagttggtgcagccttttctagaaagaagcgtttaaacattcatcagcagcaggctagagtacgctcttggccggttcaagaaagctacgccatcccgcgggatgagacgcctccaccactggatacaagaactccaaccccacgcaagaactatgctttcatgtcaaaggagcccgaaaagatccaccacatccggcatggtcggtctcagttcaatggttggaacggagacgcacctcagcagcagcagcaacagcagcagcagcagcaaatacatcaccagcagtacttacagcatcataggcagtattcatcaggaccgcaaactttctatgagccaagctgtgaggcaacaaacgagattgtctttggagccgtgcaggaggtagacagcaagcgccgcgctgtggagatcaaacccatgaaccatggcgatccgcagtatgaccaagatgggttgcggcaccgcagcagctacaccggttacagcaacaactggtagatggccagatgtccttttttgcagctacatgattagatttactgctcgttaagttattttgccgtcgtcgaatttgtactgcctgaaacagataaatagaaattcaggaagtaccggtgatatgggcaaagtcgaaagctggtttttgctggatgaacgtcgtgatcttagacctctactgatatatatatctatgtaaatggaatgtgtttttcgcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0730400, RefSeq:Os02g0730400