Os02g0738600

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Revision as of 02:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0738600| Description = Similar to CEL5=CELLULASE 5 (Fragment)| Version = NM_001054597.1 GI:115448564 GeneID:4330667| Length = 3391 bp| Def...")
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Gene Name

Os02g0738600

Description

Similar to CEL5=CELLULASE 5 (Fragment)

Version

NM_001054597.1 GI:115448564 GeneID:4330667

Length

3391 bp

Definition

Oryza sativa Japonica Group Os02g0738600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31726060..31729450

Sequence Coding Region

31726178..31726474,31726555..31726767,31727235..31727435,31728200..31728454,31728557..31729252

Expression

GEO Profiles:Os02g0738600

Genome Context

<gbrowseImage1> name=NC_008395:31726060..31729450 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31726060..31729450 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgcggcggtgcaggggcgggcacatgcgtggacgacgacgacgacgacaccgccgggcgcgatgagaggccgggcgctggtcctcgtggccgcgctgctgctgcagctgcttctcctcgccgctgccggtggcgcgggcgcggcggcgacggagaggaaggcgcacaactacgaggacgcgctgcggaagagcctgctctacttcgaggcgcagcggtcggggcggctcccgcacaaccagcgcgtcgcgtggcgcgaccactccggcctcaccgacggcctcgagcaaggggtggatttggtgggaggctactacgacgccggcgaccatgtcaagttcgggctgcccatggcgttcacggtgacgatgctgtcgtggagcatgatcgagtacggcgacgacgtcgaggccgccggcgagctcggccacgcgctcgaggccatcaagtggggcactgactacttcatcaaggcgcacaccaagcccaacgagctctgggctgaggtcggggacggcgacacggatcactactgctggcagcggccggaggacatgacgacgtcgaggcaggcgtacaaggtggaccgggagcggccgggctccgacgtcgccggcgagacggcggcggcgatggccgccgcgtccatcgtcttccgcaagtccaacccgcactacgcgagcctcctcctgcaccacgcccagcagctgttcgagtttgccgacaagtacagagggaagtatgacagcagtatcgccgaggtgaagagctactacgcgtcggtgagcgggtacaaggacgagctcctttgggccgcattgtggctgcaccgggccaccggcaaggcccattacctcgactacgtcgtggacaacgccgactgcttcggtggcaccggctgggccatcaccgagttcagctgggacgtcaagtacgccggcgtccagatcctcgccgcaagactgctgctgagaggagagcacgaggagcggcacaggagcacgctggagcagtacagggcgaaggcggagcactacgtgtgcgggtgcctggggcggaacgcggacggcggcgcggacgcgaacgtggagcggagcccgggcgggatgctgtacgtgaggcagtggaacaacatgcagtacgtgaccaacgcggcgttcctcctcgcggcgtacgcggactacctgggcgacgacgcggacggcgccgtgtcgtgcgcgggcggcgagacggcgggcgcgggcgaggtggcggcgctcgcgagggcgcaggtggactacgtgctgggcaccaacccgagggggatcagctacctggtcgggtacggcgccaagtacccgaacagggtgcaccaccgcgccgcgtccatcgtgccgtacaagcacagcaaggagttcatcgggtgcacgcaggggttcgaccactggttcggtcgccggagctccaacccgaacgtcctcgtcggcgccatcgtcggtgggccggaccggcgggacaggttcagggacaaccgggagaactacatgcagacggaggcgtgcacgtacaacacggcgcccatggtcggcatgttcgccaagctgaacaggatggcccggcaggagagggagcaggaggaggtggcggctccggcgaggagtacggcggccgatgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MRAAVQGRAHAWTTTTTTPPGAMRGRALVLVAALLLQLLLLAAA GGAGAAATERKAHNYEDALRKSLLYFEAQRSGRLPHNQRVAWRDHSGLTDGLEQGVDL VGGYYDAGDHVKFGLPMAFTVTMLSWSMIEYGDDVEAAGELGHALEAIKWGTDYFIKA HTKPNELWAEVGDGDTDHYCWQRPEDMTTSRQAYKVDRERPGSDVAGETAAAMAAASI VFRKSNPHYASLLLHHAQQLFEFADKYRGKYDSSIAEVKSYYASVSGYKDELLWAALW LHRATGKAHYLDYVVDNADCFGGTGWAITEFSWDVKYAGVQILAARLLLRGEHEERHR STLEQYRAKAEHYVCGCLGRNADGGADANVERSPGGMLYVRQWNNMQYVTNAAFLLAA YADYLGDDADGAVSCAGGETAGAGEVAALARAQVDYVLGTNPRGISYLVGYGAKYPNR VHHRAASIVPYKHSKEFIGCTQGFDHWFGRRSSNPNVLVGAIVGGPDRRDRFRDNREN YMQTEACTYNTAPMVGMFAKLNRMARQEREQEEVAAPARSTAADV</aaseq>

Gene Sequence

<dnaseqindica>119..415#496..708#1176..1376#2141..2395#2498..3193#gcgtcgatcacgcagcgcgggagatcgcgcaaagaaccgagaagagctcatctcatccaccatcactcgcgcagagagatcgatagccacagcgcacaagcaacgcgccgccaatcacatgcgcgcggcggtgcaggggcgggcacatgcgtggacgacgacgacgacgacaccgccgggcgcgatgagaggccgggcgctggtcctcgtggccgcgctgctgctgcagctgcttctcctcgccgctgccggtggcgcgggcgcggcggcgacggagaggaaggcgcacaactacgaggacgcgctgcggaagagcctgctctacttcgaggcgcagcggtcggggcggctcccgcacaaccagcgcgtcgcgtggcgcgaccactccggcctcaccgacggcctcgagcaaggggtacatggacgaacactactccattgcgcagcgagaattcgatggctagattgttactaacttggatggtggttaattaggtggatttggtgggaggctactacgacgccggcgaccatgtcaagttcgggctgcccatggcgttcacggtgacgatgctgtcgtggagcatgatcgagtacggcgacgacgtcgaggccgccggcgagctcggccacgcgctcgaggccatcaagtggggcactgactacttcatcaaggcgcacaccaagcccaacgagctctgggctgaggtacgtaattaatcaaatccttcacctaaactgcttccatctgatgacggcacgatcatgcgtgagaccatttctgatctctctctctcatgcatgacgaaattgtcctagctgttgaacacaagctacaacatatagagatcaagagaccagttcagttatcactactactacttgtactttactagttcttttctttttcttttttcttttttcttttcttttccctcctaacattctgaacgtagccaaattatattcttgttacgaagaaaaggtgttctttctggtgaatagcaacaaccgtgttaggtggccagtttgatggagcgtacgattacgaacattaaactatgcgtttccacatggcgtagtagtgccaagatttcgaaatttttgctcacttctgccaaaattaaaacgctgaattttctttctaagaaaagaaaaccgtgattaatttgcaggtcggggacggcgacacggatcactactgctggcagcggccggaggacatgacgacgtcgaggcaggcgtacaaggtggaccgggagcggccgggctccgacgtcgccggcgagacggcggcggcgatggccgccgcgtccatcgtcttccgcaagtccaacccgcactacgcgagcctcctcctgcaccacgcccagcaggtactaactacacacataatccagctcaccaacgtgcaacaaagtctcgtggattaattggatctttctggatcaattattatttcggcgacgaagaaattaaaatggcgaaaattcaaatttcgaaattttggggggtattgtttaccagtacgcgtaccgaattttggaccgttgcgtgtacttgcaactttagtcaagatgtgccggactttttctttggatgcgtatcagtattatagtattttctgagaaacatcattatagtattagtgttagtgttttggatgtgtgttctttcttgtgccttgtgcggcacatgccaacttgtcaacacgacgacggcaggagaaaattttaaattttttccaaaaaaaagaacattttttttgaggtgagaagtctgtgtcggttcgtagatagctgctggcaagctggtggctggcatgcggggccaaggagccggcacgcaacctaacgaggagaaaagaaaaaaaaaagatagttagcatctggtagatgagaaactttccatttgctaactcgttttggtccatgattaggtcgccagttcaatcgcataaactactccttagaaaccaagaaatgtcgtgtcgtcatgcgcgaattgaactagtccgtagctccgtatgcatgacttttttccagcgtcagctatgacaacaaaaaaaaggtcttattaatatacgtactcctcatgattaaatgaattttgctgaatacgtttgtgtacgtgtgtgcagctgttcgagtttgccgacaagtacagagggaagtatgacagcagtatcgccgaggtgaagagctactacgcgtcggtgagcgggtacaaggacgagctcctttgggccgcattgtggctgcaccgggccaccggcaaggcccattacctcgactacgtcgtggacaacgccgactgcttcggtggcaccggctgggccatcaccgagttcagctgggacgtcaagtacgccggcgtccagatcctcgccgcaagagtaagcccaaacacagaaaaacgttattactgatgaacttgtccagactttgtacacatattcgacacacgttctaacggtgtattgtgtgtttggtgacagctgctgctgagaggagagcacgaggagcggcacaggagcacgctggagcagtacagggcgaaggcggagcactacgtgtgcgggtgcctggggcggaacgcggacggcggcgcggacgcgaacgtggagcggagcccgggcgggatgctgtacgtgaggcagtggaacaacatgcagtacgtgaccaacgcggcgttcctcctcgcggcgtacgcggactacctgggcgacgacgcggacggcgccgtgtcgtgcgcgggcggcgagacggcgggcgcgggcgaggtggcggcgctcgcgagggcgcaggtggactacgtgctgggcaccaacccgagggggatcagctacctggtcgggtacggcgccaagtacccgaacagggtgcaccaccgcgccgcgtccatcgtgccgtacaagcacagcaaggagttcatcgggtgcacgcaggggttcgaccactggttcggtcgccggagctccaacccgaacgtcctcgtcggcgccatcgtcggtgggccggaccggcgggacaggttcagggacaaccgggagaactacatgcagacggaggcgtgcacgtacaacacggcgcccatggtcggcatgttcgccaagctgaacaggatggcccggcaggagagggagcaggaggaggtggcggctccggcgaggagtacggcggccgatgtgtaaatagattaggttatagagggggggctgtacaattttccccattcttttgttcatttttcttctccttctttggagatcttcttttcacacagattggaaaaattcattttgtatacaaaaagagaaagggacgggtggaggcattcgcatgcaaatgtaaattcgccaccggtacatacgaagaaaaagaattttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0738600, RefSeq:Os02g0738600