Os02g0742800

From RiceWiki
Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0742800| Description = Conserved hypothetical protein| Version = NM_001054626.1 GI:115448622 GeneID:4330696| Length = 3371 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0742800

Description

Conserved hypothetical protein

Version

NM_001054626.1 GI:115448622 GeneID:4330696

Length

3371 bp

Definition

Oryza sativa Japonica Group Os02g0742800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32007510..32010880

Sequence Coding Region

32007799..32008116,32008259..32008852,32008964..32009059,32009183..32009324,32009450..32009713
,32010341..32010426,32010527..32010552,32010673..32010763,32010841..32010879

Expression

GEO Profiles:Os02g0742800

Genome Context

<gbrowseImage1> name=NC_008395:32007510..32010880 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32007510..32010880 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcataaactcctggccctaaatcagaggcagaaaatggttttacagcggaaaactgaagaagcagcaatggctacgaaaagactgaaggagtcgcttgaagcaaaaaagtccacccgtgacacatatggaagtgcaagcggttctgggattcaggctttaatgcgggccattgatgatgaacttgaagtgactgtaagggcatacgaattgcgttcgcactacgagcgacaaatgcaagagagagcagcaatctccaaggaaatagcaaagctgaaagagtgtcctcaggctatgtctcctagtgctagaagttctaggatatcagcgctagaaaacatgctgtcatcatcctctagtgcaatggtgtctatggcttctcaactgtctgaagcggaggagcgagagcgtgcattcaatggtaagggcagatggaaccatgtaaggtcccttcctgatgcgaagaacacaatgaattacctttttcagttggcatcatcttcaagatgtcaacaacttgacaaagaggtgatgtgtaaagagaaagaacacctcatttgtgacctgaaggaaaaggtggttgcacttaatggtagaatcagacaattagaaactcaagtgaaggatttgaataaccaaaatatgctgttatttactgctataagtgaagcaaaaaatcctgttggcacttccagaaagggtactgttggttctgaagatggtcaacattatgctatgcgaaagagcattcgagcttcccatagtttacattatagtaagaacagcttcttgtggtctgatgacatggatatatcagattctgagaaatcggaaggatctgatgcagattgggaagcatctgatgcagactacggagcatctgatgcagattgggaatgttcgaagaaggtcagaagacgtcggcaaacagtgtccagccatctgaatcctaacccgggtagtggtactacacaaaaaagtgcaaaatcagaaatggccagtcaagaaaagtctacttcactggaccttgctccacagtgctgctcatgctcgaaatactcatcctgcaagacccaaaaatgcgaatgtagagcttcaggttcacattgtgggggtgattgtggatgtattacctccaggtgttctaatagggtggatatgaaggaagaaaaggaaggtggtggggtggttgaagtatcttcttcagatgatgtggatgatgcaaaagttcaggaaattgtgaaggagggcgtcatgcttcttgagaattctatgtcagagaaggaagctcaagagacaaaatcaagaaaaccactggctgatattggaaatggtgtggtgaaacaaactggggcaaaaccaaagcaaaggaagaattggcgcaagtctaccgttcagctcgtcccttcagcgccacctctcccacccacggcgccgcagaacaccgagccggttccacggaacagagacatacccctcaggctgccccgagcaatgtcctcaccagctgtggacagcatccctctcacggaccgcaacgccgcgaagcctgacgaatccatgagcagcaacaaggagaacgtcactgccgttcgtgcgagatctcctgctcggccgagaaagaacgccaacgagaaagagaatcacttgcgatga</cdnaseq>

Protein Sequence

<aaseq>MHKLLALNQRQKMVLQRKTEEAAMATKRLKESLEAKKSTRDTYG SASGSGIQALMRAIDDELEVTVRAYELRSHYERQMQERAAISKEIAKLKECPQAMSPS ARSSRISALENMLSSSSSAMVSMASQLSEAEERERAFNGKGRWNHVRSLPDAKNTMNY LFQLASSSRCQQLDKEVMCKEKEHLICDLKEKVVALNGRIRQLETQVKDLNNQNMLLF TAISEAKNPVGTSRKGTVGSEDGQHYAMRKSIRASHSLHYSKNSFLWSDDMDISDSEK SEGSDADWEASDADYGASDADWECSKKVRRRRQTVSSHLNPNPGSGTTQKSAKSEMAS QEKSTSLDLAPQCCSCSKYSSCKTQKCECRASGSHCGGDCGCITSRCSNRVDMKEEKE GGGVVEVSSSDDVDDAKVQEIVKEGVMLLENSMSEKEAQETKSRKPLADIGNGVVKQT GAKPKQRKNWRKSTVQLVPSAPPLPPTAPQNTEPVPRNRDIPLRLPRAMSSPAVDSIP LTDRNAAKPDESMSSNKENVTAVRARSPARPRKNANEKENHLR</aaseq>

Gene Sequence

<dnaseqindica>2765..3082#2029..2622#1822..1917#1557..1698#1168..1431#455..540#329..354#118..208#2..40#gatgcataaactcctggccctaaatcagaggcagaaaatggttggatttctcagtcatctccctttctagactttctaggtaacatgaaagtaataccattcttcttcaaaacataggttttacagcggaaaactgaagaagcagcaatggctacgaaaagactgaaggagtcgcttgaagcaaaaaagtccacccgtgacacatatggtaataagctgaaaacatcgactaattttatttcccattcagattactgtgcacttgtgagcaagtaattcgtaaatactgcctcatggttgaaaatttatttattttttaaattttcaggaagtgcaagcggttctgggattcaggtattatcactgaaactttgattattttttgtttgcatatatagaaactaatgctttcccattgcatttcatctgaaatattctcttgatatgtcattaggctttaatgcgggccattgatgatgaacttgaagtgactgtaagggcatacgaattgcgttcgcactacgagcgacaaatgcaagagtaagtctttgtcttcatgatggatggacttccacagggtacatttattttttttaggtataacacattcatgtatcaaataaatgggtttcagtaccttaattacaaaaggtagcccctagaactcgacggtatggatacagcctgagttaggtcacatgatgttttttttttttttttgggggggggggggtgagcttaagctgccattgaagttagggtggttggtcttcttcgcacatccagttggacttcttttctcttaataatgcaatggcacacaaacttttgcatattctttttttttttttttggggggggtgagcttaagctgccattgaagttagggtggttggtcttcttcgcacatccagttggacttcttttctcttaataatgcaatggtacacaaacttttgcatattcctagaaaactgtcttgatcttttcatctaaattttaaccaaacttcttttgtttccaaaaaaaaaaaccttttgctttgagccaatccacaatacatcattctgatcagtgcagttcaaataattgttcctaactttcattctggttgagaaattgtttctcattattctcctctaatatcattttgtttttctttaacaggagagcagcaatctccaaggaaatagcaaagctgaaagagtgtcctcaggctatgtctcctagtgctagaagttctaggatatcagcgctagaaaacatgctgtcatcatcctctagtgcaatggtgtctatggcttctcaactgtctgaagcggaggagcgagagcgtgcattcaatggtaagggcagatggaaccatgtaaggtcccttcctgatgcgaagaacacaatgaattacctttttcagttggcatcatcttcaaggtatgtcatactttgctttctgaaatgtttaaatcctcttaacattttctttggtgtttcttttaatacgaataaacaaccctaatttattgatgctgtttttatttgatgcatgttgcctatagatgtcaacaacttgacaaagaggtgatgtgtaaagagaaagaacacctcatttgtgacctgaaggaaaaggtggttgcacttaatggtagaatcagacaattagaaactcaagtgaaggatttgaataaccaaaatatgctggtaaatattctgttaattttgcagtctggcaaatctgattacattatagcaattttcatgatgcatttcaccagtatatgtttgattgaatcgtgtgtgtgcttatactttttcaatccacagttatttactgctataagtgaagcaaaaaatcctgttggcacttccagaaagggtactgttggttctgaagatggtcaacattatgctatgcgaaaggtattttttttgtatcttggttcatctagattatatgtggtgatatccaaaatgcactagatccatataatccttgtaaagtgtgtctgacatcttcccttttgcatgtagagcattcgagcttcccatagtttacattatagtaagaacagcttcttgtggtctgatgacatggatatatcagattctgagaaatcggaaggatctgatgcagattgggaagcatctgatgcagactacggagcatctgatgcagattgggaatgttcgaagaaggtcagaagacgtcggcaaacagtgtccagccatctgaatcctaacccgggtagtggtactacacaaaaaagtgcaaaatcagaaatggccagtcaagaaaagtctacttcactggaccttgctccacagtgctgctcatgctcgaaatactcatcctgcaagacccaaaaatgcgaatgtagagcttcaggttcacattgtgggggtgattgtggatgtattacctccaggtgttctaatagggtggatatgaaggaagaaaaggaaggtggtggggtggttgaagtatcttcttcagatgatgtggatgatgcaaaagttcaggaaattgtgaaggagggcgtcatgcttcttgagaattctatgtcagagaaggaagctcaagagacaaaatcaagaaaaccactggctgatattggaaatggtgtggtatgtgctatgcttcactccaggccacattgtcttgttgattaaatttgcatatctttcaatggatataattaatcatcatcattatcgtgcagttttccatgtcacagaaatgcctcatattgcttcacactcctttcaggtgaaacaaactggggcaaaaccaaagcaaaggaagaattggcgcaagtctaccgttcagctcgtcccttcagcgccacctctcccacccacggcgccgcagaacaccgagccggttccacggaacagagacatacccctcaggctgccccgagcaatgtcctcaccagctgtggacagcatccctctcacggaccgcaacgccgcgaagcctgacgaatccatgagcagcaacaaggagaacgtcactgccgttcgtgcgagatctcctgctcggccgagaaagaacgccaacgagaaagagaatcacttgcgatgattagttgatcaattggctcactcgagcctgtgaagctgcaagcatccaacggctttgttgcgaagccttttgatgttacttggtggtggggatgctgcctcggtgtccctcggcatggccggctgcggaggcaaatagaagtgaacctctggagttcctgtgaactgacccgctcgtgatgcaccgttgtttcactttgttgtcttttgttaagctatggctgatcactcaacgttgaatgtagacactttgtacaactcttgttgagatgaattaagttggttaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0742800, RefSeq:Os02g0742800