Os02g0749300

From RiceWiki
Revision as of 02:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0749300| Description = Similar to Shikimate kinase, chloroplast precursor (EC 2.7.1.71)| Version = NM_001054660.1 GI:115448690 GeneID:433073...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0749300

Description

Similar to Shikimate kinase, chloroplast precursor (EC 2.7.1.71)

Version

NM_001054660.1 GI:115448690 GeneID:4330732

Length

2652 bp

Definition

Oryza sativa Japonica Group Os02g0749300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32378559..32381210

Sequence Coding Region

32378637..32378841,32379357..32379403,32379491..32379545,32379650..32379722,32379809..32379896
,32380026..32380108,32380209..32380226,32380250..32380268

Expression

GEO Profiles:Os02g0749300

Genome Context

<gbrowseImage1> name=NC_008395:32378559..32381210 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32378559..32381210 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctccgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgagggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgccccgctccgtgccaagaaatcgtccggaggtcatgaaacattgcataactcggttgatgaagccctcttgctaaagagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggttcatagtgaagccttctttagggataatgagagtagtgtcttgagggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgttatccgaccagttaactggaaatacatgaagaagggccttggacgctcttgctag</cdnaseq>

Protein Sequence

<aaseq>MEAGVGLALQSRAAGFGGSDRRRSALYGGEGRARIGSLRVAEPA VAKAAVWARGSKPVAPLRAKKSSGGHETLHNSVDEALLLKRKSEEVLFYLNGRCIYLV GMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFRDNESSVL RDLSSMKRLVVATGGGAVIRPVNWKYMKKGLGRSC</aaseq>

Gene Sequence

<dnaseqindica>79..283#799..845#933..987#1092..1164#1251..1338#1468..1550#1651..1668#1692..1710#cccccggttctcgcctctctctctctctctcctcttcaattctctctctacctccgctgcggagctcgccgcgtagcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctccgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgagggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgccccgctccgtgccaagaaatcgtccggaggtacagggtcgctgcctttcttcttcgttctgtcagattggttgatttggcaaaagtttgtgtttttgttttggacgaactggcggtctggcgccatttgggccctttttttgtgtgtgtccgattttgtcgatcgggattgttgatatttggaggaacacatggaacgggtgcgttgattcggtcaaaaaaaaaaaaaaagcttgcaagtaaggaattaggtggtaaggctggcttcgaatggatcgaatactgcaaaagttgtgcctctttctgttgtttgcttttgctatggcgtccattttggttcagattttgagtcctattgttcggattagattgatcaaaatggataggttgattgggattattattggaaaggtaggaagagatgaagtttcgcctatgattggtccttctagatcaagccaatcctgaaaattccacgaggtgtgatttatgtcttcacaaatttcagacaaattgacgctcctcgttatattgttcctgtgcaggtcatgaaacattgcataactcggttgatgaagccctcttgctaaaggtactgcataatcaaatcaaaggcgacactggagtttgcttgttttcttccatcactctatgttctaaccatctgttttattttcagagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttggttagttctgaaacttctcattcctccaaattatcagcactgaaaaagatcaatatatagatggcatctgaatttctggttgataaattaaaacatgtctgcaggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttattcgttctttgataggtttgtatttttgctatttgccaaggagatcttgcccttggtgctcatggtaatctaagcttttatatttctggaattgtttgcagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggttcatagtgaagccttctttagggataatgaggtaatctttttttctgaatccatcttctgctaacatgatctactatcttagcatttgtttacttgtagttatcagaaggaaaatctgagactgattattttctctgtggctctcttttatgcattacagagtagtgtcttgagggatttgtcctcaatgaagcgattagttgttgctactggaggtggtgctgttatccgaccagttaactggtatctggagttcacttctatttttcctgttggaatagtttattttgtggcttctcttattttgattaacaatattgtgatctctttgttgtattatcaggaaatacatgaagaagggcctatctgtttggttggatgtgcccttggacgctcttgctaggcgtattgctaaagtggggactgcctcccgtcctcttctagatcaaccatctggtgatccatacacaatggtgactacttggcccatgaatttatgccatgcatgaatatgatattatttcagatgtatttttttaaatttttaatcagtcaatataggctcattcattcaatgtagaaatgaaaaactgcaagtatgatcctgcacatctgcacaactggtagtgtaattctttcatttcagtgctagtatgagttgctcactggattcttcctatcttaggctttttctaaactcagcatgctcgcggagcaaaggggcgatgcttatgcaaatgctgatgtgagggtttctcttgaaggtataacttcacaagtttttcgcaaatccgcgctttcccatttagagaatatgtgctaggttatgtgcgacacattacttttaagtaatgcttgataactccatttttccctgcatagaataacatatatgtttttggaacttgcagagattgcatctaaacagggtcatgatgatgtatcgaagctaacaccaactgacattgctattgaggtatgcatgataagctattctgaacccacaatcaggagcaatatgaatcttatttttttctaacgtactgaaacaatttccctaacaacattcttggcattttacagtcgtttcataagatcgagaactttgtcattgaacataccgttgacaatccggttggtgactcccaggctgactcacgtgctcagaggatacagaccttgtagaattttgatcttttttgtaccttagtgttaccttgtagcgctgttgagttatttgttcgttgtaccgacaagatgatgaaaagaaccggaagtgtattttccttgtaaactgtaaagaaaaggaataatggagctaatcagaaaatcagcgtttggttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0749300, RefSeq:Os02g0749300