Os02g0762300

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Revision as of 02:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0762300| Description = Protein of unknown function UPF0021 family protein| Version = NM_001054738.1 GI:115448846 GeneID:4330815| Length = 3...")
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Gene Name

Os02g0762300

Description

Protein of unknown function UPF0021 family protein

Version

NM_001054738.1 GI:115448846 GeneID:4330815

Length

3796 bp

Definition

Oryza sativa Japonica Group Os02g0762300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32985959..32989754

Sequence Coding Region

32986200..32986373,32986788..32986899,32987060..32987126,32987340..32987380,32987472..32987564
,32987635..32987747,32987828..32987947,32988100..32988242,32988416..32988530
,32988728..32988841

Expression

GEO Profiles:Os02g0762300

Genome Context

<gbrowseImage1> name=NC_008395:32985959..32989754 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32985959..32989754 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactctgccgttgatggcccgagacaacctccggctagggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtcccaaaaccttagagcagatatgtagggaatgcttctatgttgtctttgaggatgagatccatcagactattgttgacaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggaaaagattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaatattgccttgatttgtttctcttatctgtggatgaaggaattactggttatagagacgactcactagaaactgttaaaaggaatgaaatacagtatggcctgccattgaaaatagtttcctataaggacctctatggctggacaatggatgatattgtgaaagcaattggcctaaaaaataactgtaccttttgtggtgtttttcgacgtcaggcactggaccgaggtgctgctctcttaaaagttgacaagattgtgactggacataatgctgatgacattgcagaaactgtgttattgaatatattacgtggtgatattgcacggttaagtagatgtacctttataactactggtgaagatgggccaatcccaagatgcaagcctttcaaatacacctacgagaaggagattgttatgtatgcatatttcaaaaagctggactacttctccacagaatgcatatattcaccaaatgcataccgtggatttgctcgcgaatttattaaagatctggaaaggatgagacctagagctatactggacatcataaaatcaggtgagaattttaggatctccacaacaacaaggatgccagagcaaggaacatgtgaacgttgcggctacatttctagtcagaaattatgcaaagcatgtgtcttgctggacggattgaatcgaggcttaccaaaactaggcataggcaggaccaaaggcattgctggaggtgatggtgactgtgagcagcaagccacacgttcggagaggaacagatcgagtctgcaaggaaaacacgggaacttcgacttctag</cdnaseq>

Protein Sequence

<aaseq>MDSAVDGPRQPPARAGSRLCTRCGERKAALKRPKTLEQICRECF YVVFEDEIHQTIVDNNLFKPGDRVAIGASGGKDSTVLAYVLSELNRRHKYCLDLFLLS VDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGV FRRQALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIP RCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDI IKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLLDGLNRGLPKLGIGRTKGIA GGDGDCEQQATRSERNRSSLQGKHGNFDF</aaseq>

Gene Sequence

<dnaseqindica>3382..3555#2856..2967#2629..2695#2375..2415#2191..2283#2008..2120#1808..1927#1513..1655#1225..1339#914..1027#gaagcatcgacgccgaacggccgaagcgccgacccctcgacacgctgtccccggtcgcgcctcgcgggctcgcggcggaagggtgggaggcggaggctggagccccgagcaccgagctccgggtggtcagcccttgaaacccatcccctccacggaccacgccgccagccggtatggtttctgaaacgaatcctcttctcggattctccaatccgttgcccttttttttcccccctttttatttcaaactgaattagttattgaatcaactgtggagcttgaaatatgacaaaatataaaagaagaagacagtaggtttgaagtcacgaatcatctgttgcttaggacaaggggactttggttaagcttgttcagttctatcctaaaaaagtctatagttcagagttgatgcatttcccttttcaactccaccactgatataggtaaagataaaatgttttcaaaagtgaaaaaaaatctgattgaactttctatcttgcttgttgaaacgaagaagcaccttagttatgaacttgtcttccggtgaagaagcttctcaaagagtgttatcttcagtgaatcatgtgaagaataagctaaagaaaaaggataggcaagcaatatataaaatttggaagattgcatagttacctttcttgagcgtggttttttttctgtggaaattaaagatgatcacatcactcatcgctttccaagccatgacgcaaagttaaattgtacttttattcaggtgttatgtaatccattgaaactacaagagacatcttcagaatgaactattagtgctgctatgtgtactttaaaacatctcagtttatttcgtttcatatgaaacagttctttttaactcataatatccagcagcaaaatattttgtccatcacaattgcccatggactctgccgttgatggcccgagacaacctccggctagggcggggagccgcctctgcacacgctgcggcgagcggaaggccgccctcaagcgtcccaaaaccttagagcaggtgtgcctctatgtccttcacattttcaatgtagtttgtcctgatgttttgagacaatccaggtgcaatgatttagctctagtagcttaagattaacaagcaggaatttttatatttttgtgacagtagggatactgtgaaatgcgaaaccatttttgtttggcagctgtaggtagtgcttacacattttcttctagatatgtagggaatgcttctatgttgtctttgaggatgagatccatcagactattgttgacaataatttgtttaaacctggtgatcgtgtggccattggagcttctggtggaaaaggtatttccacacctgtatgtgccatcactaactaatgaaatagcatgtgttctttatacaactctgactactttctttattcatgtacagctataatctgcatgcttctttctttattctgctcttgatattccaacagactcaaatattttcacgccatgactgttatgcagattcaaccgtgctcgcatatgtgctatcagagttaaatcgtcgtcacaaatattgccttgatttgtttctcttatctgtggatgaaggaattactggttatagagacgactcactagaaactgttaaaaggaatgaaatacaggttcccctcccctctgccaccaacacaacaacacctgtctgctgcagcttttgccttttaatattggttctattttttacagacatttaatcaccaacttttaccatttaaatgcatattcgtcagttgctgatacaaccgacttattgcagtatggcctgccattgaaaatagtttcctataaggacctctatggctggacaatggatgatattgtgaaagcaattggcctaaaaaataactgtaccttttgtggtgtttttcgacgtcaggtaattcttccttgcctctttggtgcattttttgtactacttataggttaagctttactgccaatcctttttttttgtaggcactggaccgaggtgctgctctcttaaaagttgacaagattgtgactggacataatgctgatgacattgcagaaactgtgttattgaatatattacgtggtgatattgcacggttagtgctgatcattcctttgtcctttttttgggtggttgatgttaatgctgattttctttatatataggttaagtagatgtacctttataactactggtgaagatgggccaatcccaagatgcaagcctttcaaatacacctacgagaaggagattgttatatatccttactatgcaatatcccatataatgtgatattatgctctattcatcaattgcacttttatgttattatccttgaccttatgacacgtatgcatatttcaaaaagctggactacttctccacagaatgtaatttcttactccttcctatgtatagatgttcagcagtcactgactagcattctgtaaccaatcatgcttttatacacactagcaataattctgctaaaagaaaaattctgccatacttgaagtaatatgccatgaacttttgagagtagtattatcttctaccgactttgagatcaaatccatttaatttttccgtatttcacaattcaggcatatattcaccaaatgcataccgtggatttgctcgcgaatttattaaagatctggaaaggatgaggtaaaggcttctgttgtccaaaggaatgatcattatttttacatttgtgtttggtcatttcttggtaatgctttgtcatccagaagagagaagcctatttcttccttgcttctgaagttttttttttaatcttgaacttagtaaattatgaatggtgcagacctagagctatactggacatcataaaatcaggtgagaattttaggatctccacaacaacaaggatgccagagcaaggaacatgtgaacgttgcggctacatttctagtcaggtatagtgatggtataatatgtattacctgttgacttgtttaggacatcctccttgctgatttactcaatgagactgatgttaattagagtaagtgaataacagaggtgcttttgctaagacattagataggttgtcattttattttctttttgagggaaaggttatcagttcactcggttataccagtttatttgtgccgtcacagtttgtttctttgaattgtctgaataatgcacccacatgatagttcaatccattttgtgcattccatgaactgaactgaggccctctgcattgtgctcactcatttaagaaacctggaacctgttagctaatgatgtgattggcatgaattcccctgatttccaatgcttttactgaactgaacatcgttgaaattctggccttgtagaaattatgcaaagcatgtgtcttgctggacggattgaatcgaggcttaccaaaactaggcataggcaggaccaaaggcattgctggaggtgatggtgactgtgagcagcaagccacacgttcggagaggaacagatcgagtctgcaaggaaaacacgggaacttcgacttctagatatttcaactgtaattttgttaccatgtcattgttggtttacgacacctggatcatttggcatgattcagttgtacaagctaactatttatgattgtgagatgggttgctaaactatcagcaagctgattttacagcatctgtagttctgtacatgatgcgcgaaggccagaagcaccgctcgacacaatggtcggcggcgtgttgttacattatccgtttataagtactgtttgaaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0762300, RefSeq:Os02g0762300