Os02g0782700

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0782700| Description = Similar to Transcription factor EREBP1| Version = NM_001054854.1 GI:115449078 GeneID:4330935| Length = 2864 bp| Def...")
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Gene Name

Os02g0782700

Description

Similar to Transcription factor EREBP1

Version

NM_001054854.1 GI:115449078 GeneID:4330935

Length

2864 bp

Definition

Oryza sativa Japonica Group Os02g0782700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34086679..34089542

Sequence Coding Region

34087185..34088002,34089101..34089380

Expression

GEO Profiles:Os02g0782700

Genome Context

<gbrowseImage1> name=NC_008395:34086679..34089542 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34086679..34089542 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcggcggcgccatcatccaccacctgaaggggcacccggaggggtcgcgccgggcgacggaggggctcctgtggcccgagaagaagaagcccaggtggggcggcggcgggaggcgccacttcggggggttcgtggaggaggacgacgaggacttcgaggccgacttcgaggagttcgaggtggactccggggactcggatttggagctcggggaggaggacgacgatgacgtcgtcgagatcaagccggccgccttcaagagggccctctccagagataacttgagcaccattaccactgccggatttgatggtcctgctgcaaagtctgccaaaagaaagagaaagaaccaattcaggggcatccgccagcgcccttggggtaagtgggctgctgaaatcagagatcctcgcaagggtgttcgtgtctggcttggcactttcaacagtgctgaagaagctgcaagagcttatgatgctgaagcacgcaggattcgtggcaagaaggccaaggtgaattttccagaggctccaacaactgctcagaagcgtcgtgctggctccaccactgctaaagcacccaagtcaagtgtggaacagaagcctactgtcaaaccagcattcaacaatcttgccaatgcaaatgcgtttgtctacccatctgctaacttcacttcaaacaagccgtttgttcagcctgataacatgccatttgttcctgcaatgaactctgctgctcctattgaggaccctatcatcaactctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaagacaccagatattacatcaattgctcccatttcaaccatagctgaagtcgatgaatctgcattcattaagagcagtaccaacccaatggtccctcctgttatggagaacagtgctgttgatctgcctgatttagaaccctacatgaggttccttctggatgatggtgctggtgactcaattgatagccttctcaacctggatggatcacaggatgttgtcagcaacatggacctctggagctttgatgacatgcccgttagcgatttctattga</cdnaseq>

Protein Sequence

<aaseq>MCGGAIIHHLKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGG FVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTA GFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYD AEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPTVKPAFNNLANANAF VYPSANFTSNKPFVQPDNMPFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGWENDTKT PDITSIAPISTIAEVDESAFIKSSTNPMVPPVMENSAVDLPDLEPYMRFLLDDGAGDS IDSLLNLDGSQDVVSNMDLWSFDDMPVSDFY</aaseq>

Gene Sequence

<dnaseqindica>1541..2358#163..442#tctctccaatattttgtcgaaccgattgagggaaaaaaaaagagaaaaagaaaagaaaaaaaagaagaagaagagagaactcgaactctcgcctaccatttcgcccccctccgcaagcaatccaccactgcatcggcggcgagggctcaccggcggcgagccatgtgcggcggcgccatcatccaccacctgaaggggcacccggaggggtcgcgccgggcgacggaggggctcctgtggcccgagaagaagaagcccaggtggggcggcggcgggaggcgccacttcggggggttcgtggaggaggacgacgaggacttcgaggccgacttcgaggagttcgaggtggactccggggactcggatttggagctcggggaggaggacgacgatgacgtcgtcgagatcaagccggccgccttcaagagggccctctccagaggtatgggcgtcgctgggagcggcttgatttgtgtagtttacttgttcttcagggattgattgctgttgtaaatcgttagttctacggccgattgggaatttttttggggatcgaggacgctcggtggatggattgggaggaaaaaaaggggatagataattttaggggttgatcctgagagatcagatttggggtgatactcctgtttaattggtgatttagggtggaatgatgtgcctccatgtcttatttgtggtgatcagggcttcatgtgctgattctgtctgctaggattttagagatgccatttcagctcttgcactgttcgatcttttttttttctttttctaaattgcgcaatccatatgattacctttttctccaaggagttgaattcgcagtaaaggggaaattattctccgttctctttggaggtctccccatctgggttcttagttgttagatggatgaccctagtatcgcttgatgtggttgtatgattgcgagaggattgttccggacgtaattcaactattagtcgaagtaaaggatttttatgatgttgactgtcaagtcctacatgccttagcatatactcctggctgtttagtcgtcctggtgcctgtttttggttctatctttcggtcaatagcgtcaaatcatttttttgtggtctttgttggcctcttttgcttagacatactagttcattttatttatggggatgttacctcttgtgtaaattgtctaaatcggttgtatctagtcagtcgtgtgagctaaaccacagatctttgttgaagtgttgcaactcagttttggtgttccttgtttacaattaatgttgctgcagcatattgatgttagtccgtaaagcacaactttagactgcaattgcagaaatgatgaggtccattcatgggttttttttcctacaatcttgaatttcatgatttgagatatgctttcctaaaatttgaatgtttatacgcatggttgcatgttccaacttcatgtttgtgaccaaaagaaaataacatcagcaagagaagttcatctgtgtaatttcttgccattgatgttgaccttccattgcagataacttgagcaccattaccactgccggatttgatggtcctgctgcaaagtctgccaaaagaaagagaaagaaccaattcaggggcatccgccagcgcccttggggtaagtgggctgctgaaatcagagatcctcgcaagggtgttcgtgtctggcttggcactttcaacagtgctgaagaagctgcaagagcttatgatgctgaagcacgcaggattcgtggcaagaaggccaaggtgaattttccagaggctccaacaactgctcagaagcgtcgtgctggctccaccactgctaaagcacccaagtcaagtgtggaacagaagcctactgtcaaaccagcattcaacaatcttgccaatgcaaatgcgtttgtctacccatctgctaacttcacttcaaacaagccgtttgttcagcctgataacatgccatttgttcctgcaatgaactctgctgctcctattgaggaccctatcatcaactctgaccagggaagcaactcatttggctgctctgactttggctgggagaatgataccaagacaccagatattacatcaattgctcccatttcaaccatagctgaagtcgatgaatctgcattcattaagagcagtaccaacccaatggtccctcctgttatggagaacagtgctgttgatctgcctgatttagaaccctacatgaggttccttctggatgatggtgctggtgactcaattgatagccttctcaacctggatggatcacaggatgttgtcagcaacatggacctctggagctttgatgacatgcccgttagcgatttctattgaggaattcgaagtcttctagtcggagcatgtacacagggaaaaaaaaggtaaggattatcaatttgattttttctctctgaatatgcacgattttttacattgctctaattttgcttgtgtttttcaggaataaatactattggagattgggaggcacctgcatggcaccttgggggtagcatatcgttatgtttagcttagatgcaaaaggctgcatcctgaaactctttggtgattggacctgttccctatccgctgtctatgtatggcagccatctatgagactcaagaactgcttttttttttccgttctagttttctgtcgttgctacctgtatatggctatgaacatcgtgaatccatggccattatgttttaatctatgttgttgactgctctttctttcggtctttgctgtgctgcgctatgttggtgataactagctaccatattgattttctgtacataattcatttgttgaatccgaaattaaatagtgcattgac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0782700, RefSeq:Os02g0782700