Os02g0782600

From RiceWiki
Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0782600| Description = Similar to SAC domain protein 1 (FIG4-like protein AtFIG4)| Version = NM_001054853.1 GI:115449076 GeneID:4330934| Le...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0782600

Description

Similar to SAC domain protein 1 (FIG4-like protein AtFIG4)

Version

NM_001054853.1 GI:115449076 GeneID:4330934

Length

3958 bp

Definition

Oryza sativa Japonica Group Os02g0782600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34081397..34085354

Sequence Coding Region

34081397..34081789,34082352..34082473,34082592..34082681,34083460..34083672,34083821..34083952
,34084626..34084701,34084890..34084976

Expression

GEO Profiles:Os02g0782600

Genome Context

<gbrowseImage1> name=NC_008395:34081397..34085354 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34081397..34085354 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttttatgtgaagaaaacagcaatagcgacaacacagactgtacggaaattgttggtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacagaggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtgtcttacggacgaactgtatagactgcttggatcgaacaaatgttgcccagtatgcctatggtttagctgctcttggacatcagttgcatgtgcttggttctgtagaatccccagaacttggtttagatgaccccttggctcatcatttgatgcacttttatgagaggatgggtgacacccttgcggtgcaatacagtggttcggctgctcataacaagatattctctgcaaagagaggtcatctgaagctttttattcgatcacaagagttcttcagaacactacaacggcactacagcaatacctgtatcgatgctaacaagcaagcagccataaacttatttcttggctacttccaaccacaggaaggaaaacctgcactctgggagctagagtcatcttcagtggatcatatcgctgtgcacgcacgtacaataaaaagagtgagatcagatggcagcattctttatggaagcaacacatccatatctggatgtagtggttgccataatgaagacaaggagctgttgaatgcagcaccgcttgatgttaaaagtgggtcacaatttccagtgttggaatctgattcagtacatggcaatgaaatttcattgacctgtgaaagtgaggtatcaaacttaaggtatacacctatgatacctcagacacatcatgttccaggcggcgttgaaactgaaagtagcattcattctggtgattcaaactttctggatcttgaatggctttcaacttcaggcaactcaagcgatgaaaggtccattgcaattagtactccagatgtgaacctttcagcggagaatgttataagtggcataaattctgagaccatggaaaatcaagatgctgatatctatactcagaatttacctgagcatttcgtgcagtgggttaaccacggagacaccttttggtattaa</cdnaseq>

Protein Sequence

<aaseq>FLCEENSNSDNTDCTEIVGDISQEDISGSSDSSCNGTTEDKAEN NESPPLKPPKFQKGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHVLGSVESPELGLDD PLAHHLMHFYERMGDTLAVQYSGSAAHNKIFSAKRGHLKLFIRSQEFFRTLQRHYSNT CIDANKQAAINLFLGYFQPQEGKPALWELESSSVDHIAVHARTIKRVRSDGSILYGSN TSISGCSGCHNEDKELLNAAPLDVKSGSQFPVLESDSVHGNEISLTCESEVSNLRYTP MIPQTHHVPGGVETESSIHSGDSNFLDLEWLSTSGNSSDERSIAISTPDVNLSAENVI SGINSETMENQDADIYTQNLPEHFVQWVNHGDTFWY</aaseq>

Gene Sequence

<dnaseqindica>1..393#956..1077#1196..1285#2064..2276#2425..2556#3230..3305#3494..3580#tttttatgtgaagaaaacagcaatagcgacaacacagactgtacggaaattgttggtgacatatcccaagaagacatctctggcagctctgattcctcttgcaatggaactacagaggataaagctgaaaacaacgaatcacctccactaaaaccaccaaaattccaaaagggtgtcttacggacgaactgtatagactgcttggatcgaacaaatgttgcccagtatgcctatggtttagctgctcttggacatcagttgcatgtgcttggttctgtagaatccccagaacttggtttagatgaccccttggctcatcatttgatgcacttttatgagaggatgggtgacacccttgcggtgcaatacagtggttcggctgctcataacaaggtatttaacaggaaatccatttttttctgagaattattgaagtactgcaagcagcaggataaactgttggtgctcccatgtggtgatcatggattaaattaggaaaaatggtataattgggttattctagggagaagtgatattctttggttgtcatggctgcctggaagggaattacagcatttgattttaagatttaatagcttaagtagcatttgagctcactaaagtgcttcctttttcttatctttcagacttccactatgaattatttaacacgcataaaagaacttcccttgcatgattttctttattatgaaatcaacatttatattgacaaacctgcttagcttcagttggacaatgataagagtaaggctctttctcattgaaggacattggtggattctgcacttctgttctattactaaacttcagtagagtatatttgcccttttgcttgacatcacatcttttattttctctatttcatatggtgttctatttctcattttagctgaacatttgtctaatttctctttactgtgatctttttctgaagatattctctgcaaagagaggtcatctgaagctttttattcgatcacaagagttcttcagaacactacaacggcactacagcaatacctgtatcgatgctaacaagcaagcagccataaacttgtatggtttacagcatgtgctcactaatcagaaacacttggtctgaccaaaatatgaacagtggtcgttgttcttacatttatttatgacttgtttttttgtccattgtgtatttcagatttcttggctacttccaaccacaggaaggaaaacctgcactctgggagctagagtcatcttcagtggatcatatcgctgtgcacgcacggtaagcttaagaatattcgtctatatgaccatgcaatacattaaaattagatctgcaggttgtactagtttgttgatgatgttctaatattactgatgtttgctgggattattctataaatactcgcaaaattcgttaaaacatatgattcacctatttattgtcctagcgacctgatgcgatccggtaatgaataatatgcccagtgcttatcaatgcatgctatccaaataaatggtttacaatttaaaatctataagcatctagcttgccctagctgcatgctcctccctttcgcatgtgaaataattgacaagtagaatatcatgttcttattttcatcttataaaattaaaaggtagcagtattaaatgccattgaaaaacttgagatgatcatttgtgctacctgatatgtcactgctctgtatactatgcgaatatggactaagatctcctgatgatatgctgttatggaacacacaacttttggtaaaaacatccttgggagtttaaaatcatggtacaggagtcaatggtgcgcagtagcgaaaacatagttaggagttgcatattatgctgttttgctattccaaaacgtttttgaactgtagcaggatgcttgttcctatttaaacgagagcttttagccatttattaccttttgtagcttccctgcttgttacgttcgaagaaaacaaaaataatccgtactgaaatatgcactttgtaaaacagtaaggggttcttaccattgactgttttctttaattccacagtacaataaaaagagtgagatcagatggcagcattctttatggaagcaacacatccatatctggatgtagtggttgccataatgaagacaaggagctgttgaatgcagcaccgcttgatgttaaaagtgggtcacaatttccagtgttggaatctgattcagtacatggcaatgaaatttcattgacctgtgaaagtgaggtatcaaacttaaggttggtttctattcgttcaaggttttgaccttcactcttctcatacaagtattttactagaaaatcatgaaaaagcatggtattttaaatagtggactactaccatttgtatttgagaccttaattcctctctcaaaattcgctacaggtatacacctatgatacctcagacacatcatgttccaggcggcgttgaaactgaaagtagcattcattctggtgattcaaactttctggatcttgaatggctttcaacttcaggcaactcaagcgatgaaaggtgtttgcttttgcattgctaatgtatttttttttagcgttttcgactgacagaatatcatcttcacagtgacagtcaatttgatttacacacattttctttgccttagtgtaggaaaaagtgaaggataattattagttgattgtccagtaaatttcttacccttaatgcttaattccatatcaatctaaattctagagttcttttgctctcactgcatttccatgtaataaacacaaatctgtagtatcgtgttgtatcacttgatataactatatgtattgagaagtactacctccgtcccataatataagggattttgactttttatttgtaacgtttgaccactcgtcttattcaaaaaatttgtgcaaatataaaaaacgaaaagttgtgcttaaagtactgtggataataaagtaagtcacaaataaaacaaataataatttcaattttttttgaataagacgaatggtcaaacagtgcaaatgtcaaaatcccttatattatgggacggagggagtaaaatggaaatattatgttgccacacttcctaaatccaattaacaagtgtcttctgagcttccagtatgttcactgatgctaatttgaagatatcctctgaaacatttttttgtaactcattgaatgctgatggattgtgcttgaacaggtccattgcaattagtactccagatgtgaacctttcagcggagaatgttataagtggcataaattctgagaccatggtgagcatatgttcccaacagttcgattccgctaaattctgttctttgattttgttgaaatttgttcagaccaattctggagattaattgtgtgagaatttatagtggtagggtagagatcatgtatgcaaatatgcaatatcattgtgctaataacataaccaattgcgaaatttcaaacttttcaggaaaatcaagatgctgatatctatactcagaatttacctgagcatttcgtgcagtgggttaaccacggagacaccttttggtattaaaattacccgatgcttgtgtcatgtacgcggtacgcgttggctactttgaaggccaaaacttgtcttttccaagtggtcatgagacgggaattggtgatttgagtagggaattaggagtgagaagagatagatggcacagcaaacttcagacattcgccttgtgatatatgtccacatcatcccatagccctcttaggaaagtataacattctggttatttgttcccatctttcttgtaggagcaagtagataggcgtttttctcaatttttgaaaagaaagtagaggtagattcatatggatatataatttttgttctttcgaaaaatgtaccattgtgggaacattccgtttgatatgtaaatattattttatgctt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0782600, RefSeq:Os02g0782600