Os02g0786300

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0786300| Description = Similar to Typical P-type R2R3 Myb protein (Fragment)| Version = NM_001054869.1 GI:115449108 GeneID:4330950| Length ...")
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Gene Name

Os02g0786300

Description

Similar to Typical P-type R2R3 Myb protein (Fragment)

Version

NM_001054869.1 GI:115449108 GeneID:4330950

Length

3987 bp

Definition

Oryza sativa Japonica Group Os02g0786300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34285725..34289711

Sequence Coding Region

34285725..34285968,34286060..34286112,34286744..34286781,34287088..34287482,34288460..34288589
,34288880..34289711

Expression

GEO Profiles:Os02g0786300

Genome Context

<gbrowseImage1> name=NC_008395:34285725..34289711 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34285725..34289711 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggctcgcgatgacgacctcggcaacgacgacctcgacgatgaccggtcaaatccacgccgccagtctggaggtcgcacggccggcccaatccggcaggggttgcatggtgacataggcctccaaatgacggcagccatggctggtgacgacgcaaatgacggcggccatggctggcggcggtggctgtcaacggcggcggtcgcggcggtgctcctcagcttaggggatggtggtgacgatgacaaggcaaccgaggggatacgggggagctcagcagggatgtatactgataaaagatcagtttcagaggacacacacctctatccatctactaaacctactataaagccagcccggccacaaccccagatgcacccgctcaccgctgctgccaaacacgccatcaccataccaccaccaccaccaccagccgcagcagctagctacacatcgtcgccgtcgtcaggcactagcgatccatcggttctagatctctcttctgctgagatagacgacgacggcgacggcgacgacgatcgagctgagcagcaagaaatcaagaattcgaaggagttagtgatggggagggcgccgtgctgcgacaaggcgagcgtgaagaaagggccgtggtcgccggaggaggacgccaagctcaaggcctacatcgaggagaacggcaccggcggcaactggatcgcgctgccgcagaagatcgggctgaagagatgtggcaagagttgcaggctcagatggctcaactacctgcggccaaacattaagcatggtgatttcacagaagaagaggagcacatcatttgtagcctctacattagcatcggtagcaggtggtcgatcatcgcggcgcagctgccggggagaacggacaacgacatcaagaactactggaacaccaagctgaagaagaagctcctcggcaagcgcgcgccgtcgcgccgcgcccgcgcaaaccaagaccactgcggtctagcaggcagcgccgccgccgccatgtgcggtggcgtcggcaccgcggcggcggcggcgccgccgcatcaagccctaagctcgtcggccctcgagcggatccagctccacatgcgcctccaaggcctctacaacagcgcgttcggctgcaccaccaccagcagcaacggcggcggcgtcggcgtcgcgccgccgcagtggccgaagctcgaggcgctgctgccgagcagaccgctcccggccgtgcagccgacggacgccgtcgtcgccaccgtgcaacacccccatcatttggtcgtcggcggccataccctcgccaccgccgccgccgccgccgccaccacgtcggaggcgttccaagccgccgagcacctcgaccctgcggcggcgaccggttcgaactacatgccgggagtcgccggtgtagagatgacctcgtcgtcgtcaatggcgggtggtggtgggttcgtcgccggctacggtctccacgacgagctatacgacttcctcttcaagtgcgagtcgatcggcggagcgcaaggcgggatcatcccttcgtcgttgccggagctgcagtgcccggacggcagcgccatcatcggcgccgacgagaagttctcgacgtggacgtcgtcgtcttgcgactacggttcgggcggcgccggcgattacgttctagggtatgatcaataa</cdnaseq>

Protein Sequence

<aaseq>MAAAAARDDDLGNDDLDDDRSNPRRQSGGRTAGPIRQGLHGDIG LQMTAAMAGDDANDGGHGWRRWLSTAAVAAVLLSLGDGGDDDKATEGIRGSSAGMYTD KRSVSEDTHLYPSTKPTIKPARPQPQMHPLTAAAKHAITIPPPPPPAAAASYTSSPSS GTSDPSVLDLSSAEIDDDGDGDDDRAEQQEIKNSKELVMGRAPCCDKASVKKGPWSPE EDAKLKAYIEENGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGDFTEEEEHI ICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKRAPSRRARANQDHCGL AGSAAAAMCGGVGTAAAAAPPHQALSSSALERIQLHMRLQGLYNSAFGCTTTSSNGGG VGVAPPQWPKLEALLPSRPLPAVQPTDAVVATVQHPHHLVVGGHTLATAAAAAATTSE AFQAAEHLDPAAATGSNYMPGVAGVEMTSSSSMAGGGGFVAGYGLHDELYDFLFKCES IGGAQGGIIPSSLPELQCPDGSAIIGADEKFSTWTSSSCDYGSGGAGDYVLGYDQ</aaseq>

Gene Sequence

<dnaseqindica>1..244#336..388#1020..1057#1364..1758#2736..2865#3156..3987#atggcggcggcggcggctcgcgatgacgacctcggcaacgacgacctcgacgatgaccggtcaaatccacgccgccagtctggaggtcgcacggccggcccaatccggcaggggttgcatggtgacataggcctccaaatgacggcagccatggctggtgacgacgcaaatgacggcggccatggctggcggcggtggctgtcaacggcggcggtcgcggcggtgctcctcagcttaggggatggtgggtgcggaggaaggtcggggaaggcagcactcctccctgtggatggcggccacggcaaaaggcgatggcgacgatgctcctcccacaggtggtgacgatgacaaggcaaccgaggggatacgggggagctcagcagggatggtgagagccggtgtggcggcagagctagagggagaggagaagcatggatacagggagaggcggatagaaggatagccagtctgggaggctggccaatattggccagtgcgtgggttgagatggagaggcatttggcttagagagtcgaatagagagtctattgaaggagtgtttttggttcatttgctaaatttttggcttggaggaatagagaggctgttggagatgcttttactcttaggagtgggtaatactacttgcaagcgatctcgttccatatcaatatgtaacgactttctttttagtgtgctaatgtcatcgtatttgcaggatcatcgcgtgttgtttatcgtatatgcacccgatgacttcaatgaagtccatatgcgtcgacgcgtagtttctcaatgaacgtaatccatttacctatgttgcctttgatagttttgttttattggaaaaaaaaatgaagcaaccctgatcatgttaaaaaggagaagcatgcgcatgtcataaagtataaaccgtgttgatcaatgcactattgttgatttagtcatatgacttagctctagtaccattgtaatagatcatgcgcattttgctaaacataatggattgatatttgcagtatactgataaaagatcagtttcagaggacacacacctgtaagtattcatggttaactagtgcaaatcaattaattaaccgatgtcagcagcagctagcgtaataatcaaaagttggcttggcagagaagatcttggtgagtgcatgtctgacttgactgcatggtagggcggcgtccgttaatccccagcaacacacacacacacacaaacacacacaaaaaataatgtggcggtgtccctataatggagccaaccgtcacatcatcacctcacaaattcacaattctcacaagcccacacccgtatttttctcccggtgtccggtgcctccttcctctctagctatccatctactaaacctactataaagccagcccggccacaaccccagatgcacccgctcaccgctgctgccaaacacgccatcaccataccaccaccaccaccaccagccgcagcagctagctacacatcgtcgccgtcgtcaggcactagcgatccatcggttctagatctctcttctgctgagatagacgacgacggcgacggcgacgacgatcgagctgagcagcaagaaatcaagaattcgaaggagttagtgatggggagggcgccgtgctgcgacaaggcgagcgtgaagaaagggccgtggtcgccggaggaggacgccaagctcaaggcctacatcgaggagaacggcaccggcggcaactggatcgcgctgccgcagaagatcggtaagcacgcatatatatatatactcctctcctaccttgtgttctttcgcctagcttaatttgctcttgcttcttcaattcattttgctgtttctggacttctctctagtggctgatttgtgtgttattagctagggctgggcaccgaccgcgctgtttggtcttccttatgtagatgttgtaacgcacaaagcccccttcttatttcaattaacatttggtcagcctaatcttgggctaacccagcaaaaattgggtttgttttcatgaattctaatttatcctgctagcaattaatttccttggttatgacaggtggttgctagcttgctagtgcaagttaatcatccatatgtttagcttttgataggtagtagtatggtttttgttgtgtgattgagtctaaattggggattaaagcaaaacattttttagagatgcatctaatacatgctattttccctcttttgtatcacctgtatggtggattggctgttttactaatagaaggtaaagtttatgtagacttttgatctaaaaggggtgaactataacatgatcatccatttgtagattgccctatttgtttgtcgtggagtgagagatctagatcaaaggggatcaagttgattttttttcctgataaattaagagggatcagcttgaagcacacatgataattacatgaacctaaacttgagtagtctgttaatgtctagcacactggaagatatgccaagtagtttgatcttagttattagttaaattctagctagcttgtatttgttgatcttcagtagtatgcatgcatagcccttcaattctcctcttatttttgtctctgaatactggagcgcagtactagctaatggttgtctatcctagaccatttcatttctgtctcctgatctgatgcaattgggtgctgtataattcaaatgaatttaaagtatattaattgcatatgattattgtagggctgaagagatgtggcaagagttgcaggctcagatggctcaactacctgcggccaaacattaagcatggtgatttcacagaagaagaggagcacatcatttgtagcctctacattagcatcggtagcaggtaataatcaccatattagcaacttgtcctctcatcgcatgtgcatacataactgcatgcacacacctctctatctacttctactttcctcattctttttcccctttcatctcagagactaacacgtacatgcatcacttactaaaacatggcatgcactattaataacttcagctattaattatcaaaacaaaacaaaacaaaacaaaaactctagctaattactaataatctccctaaaaaatctagataatttagtagagatgtgctaatgctagttgcattcacaggtggtcgatcatcgcggcgcagctgccggggagaacggacaacgacatcaagaactactggaacaccaagctgaagaagaagctcctcggcaagcgcgcgccgtcgcgccgcgcccgcgcaaaccaagaccactgcggtctagcaggcagcgccgccgccgccatgtgcggtggcgtcggcaccgcggcggcggcggcgccgccgcatcaagccctaagctcgtcggccctcgagcggatccagctccacatgcgcctccaaggcctctacaacagcgcgttcggctgcaccaccaccagcagcaacggcggcggcgtcggcgtcgcgccgccgcagtggccgaagctcgaggcgctgctgccgagcagaccgctcccggccgtgcagccgacggacgccgtcgtcgccaccgtgcaacacccccatcatttggtcgtcggcggccataccctcgccaccgccgccgccgccgccgccaccacgtcggaggcgttccaagccgccgagcacctcgaccctgcggcggcgaccggttcgaactacatgccgggagtcgccggtgtagagatgacctcgtcgtcgtcaatggcgggtggtggtgggttcgtcgccggctacggtctccacgacgagctatacgacttcctcttcaagtgcgagtcgatcggcggagcgcaaggcgggatcatcccttcgtcgttgccggagctgcagtgcccggacggcagcgccatcatcggcgccgacgagaagttctcgacgtggacgtcgtcgtcttgcgactacggttcgggcggcgccggcgattacgttctagggtatgatcaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0786300, RefSeq:Os02g0786300