Os02g0791200

From RiceWiki
Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0791200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001054892.1 GI:115449154 GeneID:4330973| Length = 363...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0791200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001054892.1 GI:115449154 GeneID:4330973

Length

3633 bp

Definition

Oryza sativa Japonica Group Os02g0791200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34482671..34486303

Sequence Coding Region

34483151..34483450,34483552..34483611,34483700..34483771,34483852..34484027,34484117..34484277
,34484490..34484548,34484637..34484683,34484817..34484957,34485206..34485297
,34485595..34486082

Expression

GEO Profiles:Os02g0791200

Genome Context

<gbrowseImage1> name=NC_008395:34482671..34486303 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34482671..34486303 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggtttgggcggcctcgtggattgggaaatttcagggtgaagtcttcgattcgaggccttcccgtgcacgctaagagaggagatcctcagcttcgagcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgagcggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtacaacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgccgccgcgcagggtcaccatgagattgtttctctgttgctcgaatccggcgtcgagatcaacctcaggaattacaggggccagactgctttaatgcaagcctgtcaatatggccactgggaggttgttcagacactgatgcttttcaatgcaaatgttcataggacagattatttgaatggcggtagtgctctccattttgctgcactacatggtcatgcccggtgccttcgtcttgtgcttgcggattatgttcccagcatgccaaacttctggaactcgatgaaggacagcctatctgaagaaggtccatctgctgatcttgatgaagatggtttgttcaagatggtaaatcagaaggcggatggaggactgactccgcttcatatggcagcgttaaatgggcatgtagagtgtgtgcaattgttactggacttgggagcatctgttattgaggccactattgaagatggaacaactattgacttaataggagctggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtctgttgtcaacttcttattgctcgaggagctagcctttctgcacagaatgctagcggctggaccccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaaagaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgagtatcatgagcattgccagggaatttggctggaggtacctaaaccaatcacctgtatgtattgacccatgtgctgtctgcttagaaggaagctgctctgttgctgcagaaggatgcaaacatgaattctgcacgagatgtgctttatacctttgctcaaccagttacacatcagtgagcccagcaggtgccataccatgccctctctgtcgacacccaatcatcgctttcactgcgcttcctgggacaagcccaataagagagctcccaagaaacagtctttcattgtcattttgcaccacatgcccagctgtgaactccgattctactccctcaatcgccagccatctgtaccggactgaattccagtgtgcacgcatgccacctatgggttcatcctccttccgttccttgagctgccagaggttgccggcgatgaagcttaacccgtcgttttgtatgggtgctatggatacaaatccctgcctaataagatgctcaaggttcggacctagctttcgtcggtcggcttcccaaggagaaagtagcaggagagcatggcctctaacctttgatccaattgctgccactggtagctga</cdnaseq>

Protein Sequence

<aaseq>MRFGRPRGLGNFRVKSSIRGLPVHAKRGDPQLRASMGFLSLVGN SFGCSASGERLVSAARDGDLQEARALLEYNPRLARYSTFGGRNSPLHYAAAQGHHEIV SLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANVHRTDYLNGGSALHFA ALHGHARCLRLVLADYVPSMPNFWNSMKDSLSEEGPSADLDEDGLFKMVNQKADGGLT PLHMAALNGHVECVQLLLDLGASVIEATIEDGTTIDLIGAGSTPLHYAACGGNAVCCQ LLIARGASLSAQNASGWTPLMVARSWHRNSLEEILSKEPESRIRTVPSPYLCLPLMSI MSIAREFGWRYLNQSPVCIDPCAVCLEGSCSVAAEGCKHEFCTRCALYLCSTSYTSVS PAGAIPCPLCRHPIIAFTALPGTSPIRELPRNSLSLSFCTTCPAVNSDSTPSIASHLY RTEFQCARMPPMGSSSFRSLSCQRLPAMKLNPSFCMGAMDTNPCLIRCSRFGPSFRRS ASQGESSRRAWPLTFDPIAATGS</aaseq>

Gene Sequence

<dnaseqindica>481..780#882..941#1030..1101#1182..1357#1447..1607#1820..1878#1967..2013#2147..2287#2536..2627#2925..3412#gcaccccgcgattccccaatccatccatccagtcccccccctcgctggaatcgtgggtgtggggtgggttctgaggattcgaggcggcaggtcgcctccgaggattcccccttcgagttcgaggtcccttgttttcttgcgaggattgggggcctgatttagagggcgttgtcggtcggtctcggttttgcatttcttccagctcgggaccgacgaccctgggcgattcccgaggaggagtgagttccactctgatttcttggtgtagcgcggaaagttggcttttttgggtcgaattgttggtagtctcgctgcaattggtaggcgtcaagctgaaatttcccgtcaatttgccgcttcccgtgatgaatttgacgattttgcaggaaaattttgggctttctgaaccttggggttaaagatcgtcggcatgcctaaagtcgggagcttgatcctgtctggtgatcattcttgaatcgaatgcggtttgggcggcctcgtggattgggaaatttcagggtgaagtcttcgattcgaggccttcccgtgcacgctaagagaggagatcctcagcttcgagcatccatggggttcctcagccttgtgggcaactcatttgggtgctcggcttccggcgagcggctcgtctcggcggcccgcgacggcgacctgcaggaggcgcgcgcgctgctcgagtacaacccgcggctcgcccggtactccactttcggcggccgcaactcgccgctgcactacgccgccgcgcagggtcaccatgaggtgatgccatttgtctgccaaaaatgtagctgaagtatcagtgcttctgtatagatgggtaaaagaactgcattcacattgtctgttgcttgcatgttcagattgtttctctgttgctcgaatccggcgtcgagatcaacctcaggaattacaggggccaggtaaaccaagatttctggtacatttactcgtttaagtttcacttgcgaaatgctatggcaatatgctataaattttcattgtatgtagactgctttaatgcaagcctgtcaatatggccactgggaggttgttcagacactgatgcttttcaatgcaaatgtgagtattttgcttgctgttcactgagaaatttctagtcgcttggatatctaatcctgaggcattggaacgtattttaggttcataggacagattatttgaatggcggtagtgctctccattttgctgcactacatggtcatgcccggtgccttcgtcttgtgcttgcggattatgttcccagcatgccaaacttctggaactcgatgaaggacagcctatctgaagaaggtccatctgctgatcttgatgaagagtatgttagagccccttgattgtttcccattggtttattggttgttaaaccgaccatgaatcattcaaatagtatgtctgtgttagcagtggtttgttcaagatggtaaatcagaaggcggatggaggactgactccgcttcatatggcagcgttaaatgggcatgtagagtgtgtgcaattgttactggacttgggagcatctgttattgaggccactattgaagatggaacaactattgacttaataggtatttttttgcaactttaactttcctttctgtgcttggtgtttttcaatttgataatgttggagcacactcttagggcatgtagcgcttaacatgtttgaatgtatcaccaagttgtccatactatctacagttcttgattcttccagctttctactctgtttatattctcatatatctagatgtaatattttgttgcttccatctgccaggagctggtagcaccccgcttcattatgctgcatgtggtgggaatgctgtctgttgtcaagtatgttctgccagtctgaaggctttttcataatttaaatgtttgtctagttttatcaacatatctaaccagaagctgtttgatgcagcttcttattgctcgaggagctagcctttctgcacagaatgctagcgggtatgattctgaagttttgatacatggttaaagagctatcttttttcacggggcatagtgaaagaactatcactgtttctgttaattttaaaacctagtagttaaaagcatatgtttcatttcccttatgcagctggaccccgttgatggtagctcgctcatggcataggaactctcttgaggaaattcttagcaaagaaccagagagtcgaatacgcactgttccttctccatatttgtgcctcccgcttatgagtatcatgagcattgccaggtaaggttgctgctaaaatatctttacttccttttccgttacatatatgagtagtagtactaaagtactggtcatgtttgtaatcattgacttgcttagttattagtttgctatgacatgcttagaccaattcgtttactctaattgtgcagcattgataagtattatcctccattttttaaaatttaaccatagtgcagtgcttttgttggtaacatctgatagttccattgcaatttattttgcagggaatttggctggaggtacctaaaccaatcacctgtatgtattgacccatgtgctgtctgcttagaaggaagctgctctgttgctgcagaaggtacacttccaaacaaacgtattgcttatgtgttattgtcgttgaagctaactgaacttttagcacgaaaagtttcttatattttaaacaagggcattaaagtagtactgtcgactaccacactagcattaatatcataggaagttcgctaattatttcaccctttatgttctggttcataagtcataactagtaactcagcagctataaaaagtaatccagtgcacttatccttacagttaaaccaatatcagcagccgataaactgaaccttttcaactatgttcgattatgcaggatgcaaacatgaattctgcacgagatgtgctttatacctttgctcaaccagttacacatcagtgagcccagcaggtgccataccatgccctctctgtcgacacccaatcatcgctttcactgcgcttcctgggacaagcccaataagagagctcccaagaaacagtctttcattgtcattttgcaccacatgcccagctgtgaactccgattctactccctcaatcgccagccatctgtaccggactgaattccagtgtgcacgcatgccacctatgggttcatcctccttccgttccttgagctgccagaggttgccggcgatgaagcttaacccgtcgttttgtatgggtgctatggatacaaatccctgcctaataagatgctcaaggttcggacctagctttcgtcggtcggcttcccaaggagaaagtagcaggagagcatggcctctaacctttgatccaattgctgccactggtagctgatacctgatatttcctcagttttgtgcccattttgaggtttaccatgtatattcattggttgcattggtctggtttttgccgatgtgagatgaacttgctggtcccaattccttgttgatatcagtagcagcatgtaactactcctttctcttgtctgtaaataacctttgtattgctgtgtattgtccggaaatgaagaaatgaaatgcggatgagttgaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0791200, RefSeq:Os02g0791200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os02g0791200&oldid=24073"