Os02g0791800

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0791800| Description = WD-40 repeat containing protein| Version = NM_001054896.1 GI:115449162 GeneID:4330978| Length = 3977 bp| Definition...")
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Gene Name

Os02g0791800

Description

WD-40 repeat containing protein

Version

NM_001054896.1 GI:115449162 GeneID:4330978

Length

3977 bp

Definition

Oryza sativa Japonica Group Os02g0791800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34516499..34520475

Sequence Coding Region

34516746..34516902,34517008..34517067,34517144..34517254,34517330..34517475,34517556..34517675
,34518067..34518179,34518306..34518397,34518580..34518689,34518812..34518885
,34519245..34519318,34519459..34519526

Expression

GEO Profiles:Os02g0791800

Genome Context

<gbrowseImage1> name=NC_008395:34516499..34520475 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34516499..34520475 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcagctcgtcgccgccgccgccgccgcagattcgttgcgcctccttcaatcaggacaacagcttgttttatgtcgggacgaaggatggattcaggattttcgatgcccatacagggaagctccactaccagaagaatattggtggaatcggcaatatggaaatgtactttcggacaaacattcttgctatagtcggaactggtgaacagcctgtactatctcctcgctgccttcgccttatcgacaccgtagcagctgtcacaaagaaagatctgaactttaagacttcagttttggctgttcgattaagtagaacgaggcttgttgttgtattgcaggacaggacctttatttatgatgtaaacagcactactatattggaagaaattgaaacagttcccaatacaaaaggtctttgtgcattcgctcctaattcagaagcatgttatttggccatcccagcaagcacatccaaaggatctgctttagtttataaggcatcagaacctgaattaatatgccagatagatgctcacgagtctcccttagctgcaatggcattttcttctaatggcacgtacctggcaacagcttctgggaagggtactattattagagtatttctcgttgcacaagcaaccaagtcacacagttttcggcggggaacatacccatcaacaatatattcactctcattcggaccatcggatgatctgcccgatgttcttgttgccacaagttcatcaggctcgttgcacatgtttttcctcgatgctgccagaaatcgaaggaaccaaacgagcaaattgcttggttcaatgattcctggagcaataactcgtgctttggatccagcaaaccatcacattattcacaacgtcatccctgcaggaatcaagagctgtgtagccgtacataaggtcgaaaattcacaaaattcttctaaacttcctgctttaaggactgttgtctatatcataactcatgatggatacttccgcgagtactcgatcaacaccacaaagtcaaatgaatcttcctgggttttgcaacgcgagctcaatctactggataccggttgtagcactccccagcgggaggaacaacacaaggactga</cdnaseq>

Protein Sequence

<aaseq>MASSSSPPPPPQIRCASFNQDNSLFYVGTKDGFRIFDAHTGKLH YQKNIGGIGNMEMYFRTNILAIVGTGEQPVLSPRCLRLIDTVAAVTKKDLNFKTSVLA VRLSRTRLVVVLQDRTFIYDVNSTTILEEIETVPNTKGLCAFAPNSEACYLAIPASTS KGSALVYKASEPELICQIDAHESPLAAMAFSSNGTYLATASGKGTIIRVFLVAQATKS HSFRRGTYPSTIYSLSFGPSDDLPDVLVATSSSGSLHMFFLDAARNRRNQTSKLLGSM IPGAITRALDPANHHIIHNVIPAGIKSCVAVHKVENSQNSSKLPALRTVVYIITHDGY FREYSINTTKSNESSWVLQRELNLLDTGCSTPQREEQHKD</aaseq>

Gene Sequence

<dnaseqindica>3574..3730#3409..3468#3222..3332#3001..3146#2801..2920#2297..2409#2079..2170#1787..1896#1591..1664#1158..1231#950..1017#gtgcagcgctcctctgctccacgcgccacccgccaccgctccgcccaccgcccgccgtcgctccgtcaacagcccaccacccgtcaccccctctgtgctgccgccgctcgccttcttgtagtatagaggggagagagaggaggaaggctgacaggtgggaccaaataggccacaccttttttaattattttttttagctgacatatgggtcccatgatttttactattttttcggataaaattgtcacgaaagcgccacgtcaatgccacgtaatcgccacgtcagtgccacgtgggtcgaagacctagtcaaaggagccacgtaggcgccacgtcggccaaaaccgccctccatactgccgagggacattgtttgcccggttttcgtaagttgggggacgagtcatacccggttttgcggtcaagggacgaaaatcaaactgaccgacaaatagagggacctaaagtgaacttattcctttttataactagcatgtgggcccatagtttttattattttccacttcaaattacaacgtaagcatcaagtcaacaccacgtgggacaaaaactagtcaaatgagctacgtaggtgccacatcagctaaaactggagacaatactgccgagggaccttgtttgcaccggttttataaactgggggacatgttatctggtttttcagttaagggcgaatattactgggcgacaaattaagggacccaacatgaacttattctcttttgttgcaagtttgtgaattcttgggtcatactgggccgtcctgtctgcatgggctgcaagtagatagcccaggtcgacttcttttctgcttttgactgttccgaatataaaaataaattatagtaaaaaaaaagaaagaaaaaactccaagcaggaatcaattccacgagatcaagaagaagaggaagaagtcgcttcgcgggcgatggcgagcagctcgtcgccgccgccgccgccgcagattcgttgcgcctccttcaatcaggacaacaggtacgaccgagcgaacgacaagtaactggattcggggggagtcggcgattctgaattttgggggtgggaagggatttcttgggtcggatccggcgacgaagaaccctaattgtgattgcgtgccggttgatttgtttcagcttgttttatgtcgggacgaaggatggattcaggattttcgatgcccatacagggaagctccactaccagaagagtgagacttccttcaatgcatcttccttttctttacccatccctctgttcttgttgctctccattgcctagcgcgaatatccaacagtacagcatgtaaaatttggcacagattgctcgtagattgtgaagtagaaacagttaattcccagtaggatgttaagctgaataaggttacattgtgctgcctgcgttagtcagctaggttaatagtcattagtgtgcattgatgtatggtagaaccaaatgaattttattgccgttagcatggaaactggctattctatcatggaggagagagttgttctgtagtgcttttataagaagctatggtgttatagctatctgctcaatttgcagatattggtggaatcggcaatatggaaatgtactttcggacaaacattcttgctatagtcggaactggtgaacaggtacctcggccatattttccctgtttgcttgagtcgttcctgctgtgtgattgtctgtcatactattgaatttaatatagacgaatttgctagttaactaccgttcaaatttatctctgcagcctgtactatctcctcgctgccttcgccttatcgacaccgtagcagctgtcacaaagaaagatctgaactttaagacttcagttttggctgttcgattaagtagaacgaggtatgtcaccagtattttatatcctagaagggactacattagaaacatgttagtttttttatgatataaagatatttcttggttaacatatttgtgcaaaaatcatgcaatatataatgatgaatcccatattatacttgctcgtttttttttctgtaaaatagttgtcacatcatgtgcaggcttgttgttgtattgcaggacaggacctttatttatgatgtaaacagcactactatattggaagaaattgaaacagttcccaatacaaaaggtgaggatcctactgctgtttgttcctggcatcaagttgaaggagctagagaaaaagatcattaagcattcttgagaagctctctcaccatatttgctgttaatattgttattctttgtatatcaggtctttgtgcattcgctcctaattcagaagcatgttatttggccatcccagcaagcacatccaaaggatctgctttagtttataaggcatcagaacctgaattaatatgccaggtaatttgaatttgttgtttattggttaatcttattggctgttgtaggctattatccttccatgagattttctcacacatccccacgcattaatgttcttctggtcctggatctttcttgaaattattgatttacatgccattgcatttcattgataatttaggatctcttactgccttttcaaatcagagggaagaaaaaagaacagttatgcaaaattagccgtgtaagatatttatgttggtataataagctgaaaataacaaaataaaccattttccgaactgctttctttcactttgtattattaattattagctttgatagcttgttttgttctttctttacttatgttatgtcttttcactgtttttgtgtaattgaccaacagatagatgctcacgagtctcccttagctgcaatggcattttcttctaatggcacgtacctggcaacagcttctgggaagggtactattattagagtatttctcgttgcacaagcaaccaaggtgaattcaacgttatttattgtctgctcttgcaaccaactagattttcctaaactctttttacatacatacttcaacagtcacacagttttcggcggggaacatacccatcaacaatatattcactctcattcggaccatcggatgatctgcccgatgttcttgttgccacaagttcatcaggctcgttgcacatgtttttcctcgatgctgccagaaatcgaaggtacatagccagctcaaatattgataattcgtggacggtgtatgtaggcatgatctgatttactccacttttcaggaaccaaacgagcaaattgcttggttcaatgattcctggagcaataactcgtgctttggatccagcaaaccatcacattattcacaacgtcatccctgcaggaatcaagaggtgttgagttcatctgatttccactactttctaccttccattattgtcattctaatctaatcctttggaatttcagctgtgtagccgtacataaggtcgaaaattcacaaaattcttctaaacttcctgctttaaggtaagaaatgaaaacgccttttttctgcccctcatctttatttagcatatagctactgtgggttagtaaaatcttacccattattgtctttgcaaaaacttgcaggactgttgtctatatcataactcatgatggatacttccgcgagtactcgatcaacaccacaaagtcaaatgaatcttcctgggttttgcaacgcgagctcaatctactggataccggttgtagcactccccagcgggaggaacaacacaaggactgactagcagactagttggctcaccaatgacagaagcttcagctgtgtgtacatacaatttgtaagatagtgtgctggtagggctggtctgtggtttgggctgagattctaactccaattggacaagtgtatcatagatgtgcccaccaatggtgagggatgattcatccttcttgtggatgtaaattatagatagtaactgccaatatggcaatataattacactacaagtatatgtaactgctttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0791800, RefSeq:Os02g0791800