Os02g0793100

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Revision as of 02:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0793100| Description = Conserved hypothetical protein| Version = NM_001054901.1 GI:115449172 GeneID:4330985| Length = 5918 bp| Definition ...")
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Gene Name

Os02g0793100

Description

Conserved hypothetical protein

Version

NM_001054901.1 GI:115449172 GeneID:4330985

Length

5918 bp

Definition

Oryza sativa Japonica Group Os02g0793100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34587276..34593193

Sequence Coding Region

34587356..34588480,34589077..34589673,34590230..34590591,34590751..34591051,34591517..34591639
,34591903..34592358,34592470..34592970

Expression

GEO Profiles:Os02g0793100

Genome Context

<gbrowseImage1> name=NC_008395:34587276..34593193 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34587276..34593193 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacctcctcatcgcgcagatcaacaccgacctccgctcgtcggacgcgctgcggcagtcgtccgcgctcctgcaggcgctgcagcagtgcgccgccggccgcgacgtctccgcgctcgcccgcaccgtcgccaccgagatcctgtcggcgccctcctccgccgtgtgcaagcgcctcgcgctcgacctcctgcgcgcgctgccgctgccccccgacctcctcgacccgctcctcctctcctccctccgctccgacctctccttccccgaccccgacgtcgccgcctcctccattgcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgccgacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcgttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctcatggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggatgctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccggcggatgagccggcttgccggggacaagcttgttgatggagagggcgcgcttgccgtgcgtgctcagtgggcagctgaagccatcaatttcatttggtcccggcgaaacatgctcattgcacgctccatggttatgccagtagagcgcttccgggtcaccgtgtaccctattgtgcacgcagcgaaaatggttgcttctggcatggtgaacacattgcggcagattgccaagccaggggacactacaatagatgacagtgtggagtcgagcgcggagaagctggttggggtgtcggatatcatctcgcacttgctgcctttcctcagctcactggatccaccattggttttcgaggtggggataaatatgttggcacttgcagatgtgcctggaggcaagccggagtgggcttcagctgccactactgcaattttgacactttgggaccggcaagagttctcatcgatgagggaaaccattgtcagagccgtcgtgactaatctccatttactcgatcttggaatgcaggtgtctctgttcaaaaggctgcttcaaatggtgaggaatttgagagcagaatcagatcgtatgcatgcattggcatgtatttgtcggactgctctttgtgttgatctttttgcaaaagagagtgttagaagaggtcagaagcctgttccaggaacagatgtgatctcactatttgaggatgcaaatgtgaagggtgatctaaacagcataacgagcaagagcttgttcagagaggagctagtcgcttccctagtcgaaagttgtttccagctatcactccccctacctgagcagaagaattctggcacagagagcagagttataggagcattagcttatggaactggatatggtgcattgaattggacagaacctgctttggatgtggtggaagtttgcaggccttgtgttctttgggactgtggtgggcgtacctatgcaattgattgctatctgaagttgcttgtacggctttgccatatatatgatactagaggtggtgtaaagacaatcaaagctggtgcatctcaagatcagattctaaatgagacaaggcttagaaatttgcagctacagcttatcaaggatcttcgtgaggttcatacaccaagaatttcaggacgattgatatgggcaatttctgaacattttgatcttgaaggtctggatcctcttttagctgatgacccagaggatccattgaatatcatcatatctaacatgcataagattctattcaagatcgattcatctacaactacctcaagtaggatacaagatgtgcagtctgtcctcatatgcgctcaacgtttgggatcgagaaatgcaagagcaggccagctcctcactaaagaattggaggagttcagggcaagtacttcagctgattctgtcaccaagcatcagtcgcgttatgtcttgcaaataataaaatatctaacgaaccatcctgataacaggtgggttggtgtaggtgatgctacaggggattatccatttagccaccacaaacttactgttcagtttttagaggcatctgcagcacaagataggaaattggaaggattagttcacaaggccatcgaagagctttggaggccaaatcccactcagttgactctcctacaaatgaaggggattggtgctttgcacaaagagcttccaaaaacactttctttgactggcagcagtgatccatgctatattgaggcatatcatctggcagatccaactgatgggagaatcaccttacatctaaagattttaaatttgactgagctggaactccacagggttgatatcagagttggtctctctggagcactgtattatatggatggattctcccgcacagttcggcacctacgtaatcttgtttcccaggatccagtccaaagtagtgtaactgttggagtttcgcactttgagagatgctccctctgggttcaagtcttgtattacccattttatggaagtggagggtctgcagactatgaaggagattatgcagaggaggactcacaaacagttaggcagaaacgctcacttaggccggagcttggtgagccagttgttttgcggtgccagccctacaagatcccccttgctgaacttctcttgccatatgagtgctccccagttgagtatttccggctatggccaagcttgccagccatggtggagtgcactggcacatacacatatgaaggtagtggtttcaaggccactgctgctcagcagtacgacagctctcctttcctcagtgggttgaagtcgatttcttctaagcccttccatcaagtctgctctcatttcatccgaacagtagccgggttccagttatgttatgccgcgaagacatggtttggtgggtttgtgggcatgatgatctttggcgcaagcgaggtcagccggaatgttgatcttggcgatgacacggccacaatgatctgcaaattcgtcgtgcgtgcctccgatgaatccatcacaagagagatccaatcagacctccagggctggctggatgacatcaccgacggcgccgtggaatacatgccggaggaagaggtgaagagcgcggcggctgagcggctgaaggtttccatggagagaatagccctgctcaaggcggccaagccgaaggtgccaccggcgaaaaccaaggaagaagaggaagaggagaagaaggagcaagaggacctggacgagtttgggaaccccaagggcccctcgacgctttccaagctgacggcggaggaggccgagcaccgtgcgctccaggccgccgtgctgcaggagtggcaccagctgtgcaaggagaaagccttgaaagcacagtga</cdnaseq>

Protein Sequence

<aaseq>MDLLIAQINTDLRSSDALRQSSALLQALQQCAAGRDVSALARTV ATEILSAPSSAVCKRLALDLLRALPLPPDLLDPLLLSSLRSDLSFPDPDVAASSIASF PSLPSHLLPSLLSSAHADIAAALSSSAESLRLAAVTSLSSLLPRDDLALMCSTNPSLM GHATTWWGRLAELALDPADAVAATAFEALARLFQELDARRMSRLAGDKLVDGEGALAV RAQWAAEAINFIWSRRNMLIARSMVMPVERFRVTVYPIVHAAKMVASGMVNTLRQIAK PGDTTIDDSVESSAEKLVGVSDIISHLLPFLSSLDPPLVFEVGINMLALADVPGGKPE WASAATTAILTLWDRQEFSSMRETIVRAVVTNLHLLDLGMQVSLFKRLLQMVRNLRAE SDRMHALACICRTALCVDLFAKESVRRGQKPVPGTDVISLFEDANVKGDLNSITSKSL FREELVASLVESCFQLSLPLPEQKNSGTESRVIGALAYGTGYGALNWTEPALDVVEVC RPCVLWDCGGRTYAIDCYLKLLVRLCHIYDTRGGVKTIKAGASQDQILNETRLRNLQL QLIKDLREVHTPRISGRLIWAISEHFDLEGLDPLLADDPEDPLNIIISNMHKILFKID SSTTTSSRIQDVQSVLICAQRLGSRNARAGQLLTKELEEFRASTSADSVTKHQSRYVL QIIKYLTNHPDNRWVGVGDATGDYPFSHHKLTVQFLEASAAQDRKLEGLVHKAIEELW RPNPTQLTLLQMKGIGALHKELPKTLSLTGSSDPCYIEAYHLADPTDGRITLHLKILN LTELELHRVDIRVGLSGALYYMDGFSRTVRHLRNLVSQDPVQSSVTVGVSHFERCSLW VQVLYYPFYGSGGSADYEGDYAEEDSQTVRQKRSLRPELGEPVVLRCQPYKIPLAELL LPYECSPVEYFRLWPSLPAMVECTGTYTYEGSGFKATAAQQYDSSPFLSGLKSISSKP FHQVCSHFIRTVAGFQLCYAAKTWFGGFVGMMIFGASEVSRNVDLGDDTATMICKFVV RASDESITREIQSDLQGWLDDITDGAVEYMPEEEVKSAAAERLKVSMERIALLKAAKP KVPPAKTKEEEEEEKKEQEDLDEFGNPKGPSTLSKLTAEEAEHRALQAAVLQEWHQLC KEKALKAQ</aaseq>

Gene Sequence

<dnaseqindica>81..1205#1802..2398#2955..3316#3476..3776#4242..4364#4628..5083#5195..5695#cactccattctctgagatctgcgacctccccatctcccccaactccggcgatcgccggagttccccgcgacggcggcgcgatggacctcctcatcgcgcagatcaacaccgacctccgctcgtcggacgcgctgcggcagtcgtccgcgctcctgcaggcgctgcagcagtgcgccgccggccgcgacgtctccgcgctcgcccgcaccgtcgccaccgagatcctgtcggcgccctcctccgccgtgtgcaagcgcctcgcgctcgacctcctgcgcgcgctgccgctgccccccgacctcctcgacccgctcctcctctcctccctccgctccgacctctccttccccgaccccgacgtcgccgcctcctccattgcctcgttcccctcgctcccttcccaccttctcccctccctcctctcctccgcccacgccgacatcgccgccgctctctcgtcgtccgccgagtcactccgtctcgccgccgtcacctcgttatcctctctcctcccgcgtgatgacctcgcgctcatgtgctccactaatccctcgctcatggggcacgctaccacttggtgggggcggctggcggagcttgcattggaccctgcggatgctgtggctgccacagcgtttgaggcgcttgctcggctcttccaggagctggatgcccggcggatgagccggcttgccggggacaagcttgttgatggagagggcgcgcttgccgtgcgtgctcagtgggcagctgaagccatcaatttcatttggtcccggcgaaacatgctcattgcacgctccatggttatgccagtagagcgcttccgggtcaccgtgtaccctattgtgcacgcagcgaaaatggttgcttctggcatggtgaacacattgcggcagattgccaagccaggggacactacaatagatgacagtgtggagtcgagcgcggagaagctggttggggtgtcggatatcatctcgcacttgctgcctttcctcagctcactggatccaccattggttttcgaggtggggataaatatgttggcacttgcagatgtgcctggaggcaagccggagtgggcttcagctgccactactgcaattttgacactttgggaccggcaagagttctcatcgatgagggaaaccattgtcagagccgtcgtgactaatctccatttactcgatcttggaatgcaggtctgaatcaatctcctcatagcaacttactttagcctagtcaatctgatgattacttttagttatttctataatatactaagtaaaaatttagatcaaccttcaataccaactgtatgactataaggatcatggaagtgggtatatgggttcttagtgttcactggcagctgtagagggcaattttcggtcaatttgaatatttacaatcatcaactgtagatgatcttgttcaaatatagcttcctttcaatcattcaatgacatcaaggtttcgtttgaatttatgtctttaaactcattccaatataacatgtaattttaaccagctagtgtttattatgagtgcaccatgaaaccaaacaggtttgggatgctatccacaccatctaaactatttcattagagttgccagcagtgaaccaaatggcaccttagttggttcggaattccatctcctgattgctgccattcaactcaacaattatttgatttctcacgatattagttgccactatattccctagcattaaccggcgatctgtgttacatgcatataataacatggatttacaaaagtatgttttgtgatgcaggtgtctctgttcaaaaggctgcttcaaatggtgaggaatttgagagcagaatcagatcgtatgcatgcattggcatgtatttgtcggactgctctttgtgttgatctttttgcaaaagagagtgttagaagaggtcagaagcctgttccaggaacagatgtgatctcactatttgaggatgcaaatgtgaagggtgatctaaacagcataacgagcaagagcttgttcagagaggagctagtcgcttccctagtcgaaagttgtttccagctatcactccccctacctgagcagaagaattctggcacagagagcagagttataggagcattagcttatggaactggatatggtgcattgaattggacagaacctgctttggatgtggtggaagtttgcaggccttgtgttctttgggactgtggtgggcgtacctatgcaattgattgctatctgaagttgcttgtacggctttgccatatatatgatactagaggtggtgtaaagacaatcaaagctggtgcatctcaagatcagattctaaatgagacaaggcttagaaatttgcagctacagcttatcaaggatcttcgtgaggttatgctcttagttaatcttaacttttaaaatctaaacacgatggcatgtttgttttacatgaacccacatagttctttatatttgttgaatgttgatgcttcgttcatccaccaaataaataaaacagtggtttatctattttatactatctttatggcaacccattagtttttctctgttgcactgaactcctatataatattacagtacatgattttgtttcttggcatgcatcattgttatgcttgtccttgtcttttccggcctcatggatctgactattgcaaaaacttgtgctctaaagtacatttcccataaacttctctcgttcaataactaaaaagcatacactttgacaaggctttactttagtttagattatattatggctgtctttgctgggctttccttttgctcttcttccccctttcttttttcaaatatttataaactagaactgcatcatctgtaaaagattcttttcctagttggtaataatcataaagtgccgatgttgacatgacttctactctatattctacttttattgcaggttcatacaccaagaatttcaggacgattgatatgggcaatttctgaacattttgatcttgaaggtctggatcctcttttagctgatgacccagaggatccattgaatatcatcatatctaacatgcataagattctattcaagatcgattcatctacaactacctcaagtaggatacaagatgtgcagtctgtcctcatatgcgctcaacgtttgggatcgagaaatgcaagagcaggccagctcctcactaaagaattggaggagttcagggcaagtacttcagctgattctgtcaccaagcatcagtcgcgttatgtcttgcaaataataaaatatctaacgaaccatcctgataacaggtgagtgtattctgaaactcgagtaactaattctttcacaaagggtcaccatttatttagatatatactgtcataaatgttgtacaacagagaaaaaaatctctactggaacatgcattaggaaattatgaaatgtctaactttccaatatttattcaggtgggttggtgtaggtgatgctacaggggattatccatttagccaccacaaacttactgttcagtttttagaggcatctgcagcacaagataggaaattggaaggattagttcacaaggccatcgaagagctttggaggccaaatcccactcagttgactctcctacaaatgaaggggattggtgctttgcacaaagagcttccaaaaacactttctttgactggcagcagtgatccatgctatattgaggcatatcatctggcagatccaactgatgggagaatcaccttacatctaaaggtatggcctgatcgatgcatctttcccttgtttgcttaacagtatattcattttattgtacttttctgttttggtctctgttaaatgctgtttagggacaatttagctcttaacgtggagatagttatcttggggggctggggtaaaattgccagcagttttttgccaacactgtaaatactatattattaaaaaataggaaccaatattcttatgcaacctattggccacagttttctcattttaaggccatattatgtgtggccttatcatgatggatcttcagtgttagctccagcactgtgcaattgtatttttgtatttgttacctggtagcaggtaggttgattttagaagttaaaacaaccatgtgtggttccacatatatttcttttctctgaactatagaattttttgacctggaattgtattatcatgttgtttgactagtttatgttgttgcagattttaaatttgactgagctggaactccacagggttgatatcagagttggtctctctggagcactgtattatatggatggattctcccgcacagttcggcacctacgtaatcttgtttcccaggtgcttatactaatctaaatgtgcctattttgctgatgttcttagtataaactatacaattacccatcaataatttaaaactagtgtagtgccccttgtgttgctagggatctgaaatatataacatcaccataaattctgaacttaaacaaattaaaataattatcctcgagtataaaatttcacacgcataattcacatattagatcaaccaactcttattttaatccaccttatgtggaaaatgcctttccattctgcaggatccagtccaaagtagtgtaactgttggagtttcgcactttgagagatgctccctctgggttcaagtcttgtattacccattttatggaagtggagggtctgcagactatgaaggagattatgcagaggaggactcacaaacagttaggcagaaacgctcacttaggccggagcttggtgagccagttgttttgcggtgccagccctacaagatcccccttgctgaacttctcttgccatatgagtgctccccagttgagtatttccggctatggccaagcttgccagccatggtggagtgcactggcacatacacatatgaaggtagtggtttcaaggccactgctgctcagcagtacgacagctctcctttcctcagtgggttgaagtcgatttcttctaagcccttccatcaagtctgctctcatttcatccgaacagtagccgggttccaggtaagcattttgaataatctgtgtcacttgagtcatgttaccatcctctttattctttcatatacataactatcaaaattcttgggttataactcatttgatctcctacagttatgttatgccgcgaagacatggtttggtgggtttgtgggcatgatgatctttggcgcaagcgaggtcagccggaatgttgatcttggcgatgacacggccacaatgatctgcaaattcgtcgtgcgtgcctccgatgaatccatcacaagagagatccaatcagacctccagggctggctggatgacatcaccgacggcgccgtggaatacatgccggaggaagaggtgaagagcgcggcggctgagcggctgaaggtttccatggagagaatagccctgctcaaggcggccaagccgaaggtgccaccggcgaaaaccaaggaagaagaggaagaggagaagaaggagcaagaggacctggacgagtttgggaaccccaagggcccctcgacgctttccaagctgacggcggaggaggccgagcaccgtgcgctccaggccgccgtgctgcaggagtggcaccagctgtgcaaggagaaagccttgaaagcacagtgaggcttttggttttatgttgtgattttgagtgccatttttgttcttttaacccccattttgtgtatgtattagccctgctgattaatttcactccatgtactactgccgatttgttcattgtattcattgttcacagataacatttgtaacatagatccaagctttggtgtgaaaatacatttttttccccggtgaccacactatattcctggtccatttttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0793100, RefSeq:Os02g0793100